Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060485.seq
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 102 2e-22
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 101 4e-22
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 96 3e-20
10_08_0620 - 19321612-19323237 95 5e-20
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 95 6e-20
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 94 8e-20
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 93 1e-19
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 89 4e-18
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 85 4e-17
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 83 2e-16
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 73 2e-13
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 48 9e-06
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 46 3e-05
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 40 0.001
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 40 0.002
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 38 0.006
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 37 0.013
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 36 0.040
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 35 0.053
02_04_0123 + 19961904-19962096,19962836-19963029,19963334-199634... 32 0.49
02_04_0127 + 19992651-19993334,19993853-19993885,19994060-199941... 30 1.5
11_06_0417 - 23312875-23312925,23314136-23314246,23315073-23315537 29 3.5
06_03_0908 - 25858909-25859185,25859765-25859892,25860061-258607... 28 8.0
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 102 bits (245), Expect = 2e-22
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
VTITNDGATIL+QM V + AK++VELS +QD E GDGTT VVV+AG+LL+ AEKLL++G
Sbjct: 64 VTITNDGATILEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERG 123
Query: 437 IHPTVISDGFQKALQLALQVVENM 508
IHP I++G++ A ++A +E++
Sbjct: 124 IHPIRIAEGYELASRIAFDHLEHI 147
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +3
Query: 129 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
K + + D + +NI A KAVA +RTSLGP+GMDKM+Q+ +G
Sbjct: 21 KSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDG 62
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 101 bits (243), Expect = 4e-22
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = +2
Query: 239 SSSQWKVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAE 418
SS + +V ITNDGATIL +MS++ PAA+ML ELSR+QD AGDGTT+VVV+AG+LL A+
Sbjct: 56 SSGEQEVIITNDGATILSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQ 115
Query: 419 KLLQKGIHPTVISDGFQKALQLALQVVENMQL 514
LL G HPT +D + A++V+ M +
Sbjct: 116 SLLSAGAHPTAAADALHRLATRAVEVLHAMAI 147
Score = 57.6 bits (133), Expect = 9e-09
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = +3
Query: 90 AGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQA 245
A A + Y D + D+R NI AA+AVADA+RTSLGPRGMDKMI +
Sbjct: 6 AASPAQSRKTETYTDTKRRDDVRGLNIAAARAVADAVRTSLGPRGMDKMISS 57
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/32 (56%), Positives = 30/32 (93%)
Frame = +1
Query: 508 ATPVDLNNEDALLKAAATSLNSKVVSQHSTIL 603
A P++L++ D+L+K+A+T+LNSKVVSQ+S++L
Sbjct: 146 AIPIELSDRDSLVKSASTALNSKVVSQYSSLL 177
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/86 (50%), Positives = 61/86 (70%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +TNDG IL+++ + HPAAK ++ELSR QD E GDGTTSV+V+AG +L AE + K
Sbjct: 57 IVVTNDGNAILREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKH 116
Query: 437 IHPTVISDGFQKALQLALQVVENMQL 514
HPTVI + KAL+ AL V++ + +
Sbjct: 117 YHPTVICRAYTKALEDALAVLDKIAM 142
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/54 (51%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +3
Query: 102 AIKANSSVYKDKSKP---TDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
A+ A V KD K T + +NI AAKAVAD IRT+LGPR M KM+ A+G
Sbjct: 2 ALNAPVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASG 55
>10_08_0620 - 19321612-19323237
Length = 541
Score = 95.1 bits (226), Expect = 5e-20
Identities = 54/136 (39%), Positives = 75/136 (55%)
Frame = +2
Query: 239 SSSQWKVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAE 418
S V ITNDGATIL +M ++ PAA+ML +LSR+QD AGDGTT+VVV+AG+LL A+
Sbjct: 60 SGGDQAVIITNDGATILSRMPLLQPAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQ 119
Query: 419 KLLQKGIHPTVISDGFQKALQLALQVVENMQLQWT*IMKMLCSRQLQHH*IPK*FHNTQL 598
LL G HPT +D A++V+ M + + + K
Sbjct: 120 SLLSAGAHPTAAADALHLLAARAVEVLHGMAIPVELSDRDALVKSASTALNSKVVSQYST 179
Query: 599 FWAPIAVQAIRAVMEP 646
+P+AV A AV++P
Sbjct: 180 LLSPLAVDAALAVVDP 195
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +3
Query: 81 APKAGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAN 251
A A A + Y D + D+R NI A +AVA A RTSLGPRGMDKMI +++
Sbjct: 3 AAVAASPAQSRKTETYTDTKRRDDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSS 59
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 94.7 bits (225), Expect = 6e-20
Identities = 45/77 (58%), Positives = 59/77 (76%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
VT+TNDGATILK + + +PAAK+LV++S+ QD E GDGTTSVVV+AG LL AEKL+
Sbjct: 54 VTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMK 113
Query: 437 IHPTVISDGFQKALQLA 487
IHP I G++ A++ A
Sbjct: 114 IHPMTIIAGYRMAVECA 130
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +3
Query: 156 RLSNINAAKAVADAIRTSLGPRGMDKMIQA 245
R++ A A+AD ++T+LGP+GMDK++Q+
Sbjct: 18 RMAAFIGAMAIADLVKTTLGPKGMDKILQS 47
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/86 (48%), Positives = 60/86 (69%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +TNDG IL+++ + HPAAK ++ELSR QD E GDGTTSV+V+AG +L A+ + K
Sbjct: 57 IVVTNDGNCILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKN 116
Query: 437 IHPTVISDGFQKALQLALQVVENMQL 514
HPTVI + KAL AL V++ + +
Sbjct: 117 YHPTVICRAYTKALDDALSVLDKIAI 142
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 102 AIKANSSVYKDKSKP---TDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
A+ A V KD K T + +NI AAKAVAD IRT+LGP+ M KM+ A G
Sbjct: 2 ALHAPVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAG 55
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 93.5 bits (222), Expect = 1e-19
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
VT+TNDGATILK + + +PAAK+LV++S+ QD E GDGTTSVVV+AG LL AEKL+
Sbjct: 55 VTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMK 114
Query: 437 IHP-TVISDGFQKAL 478
IHP T+I+D F+ L
Sbjct: 115 IHPMTIIADKFRSDL 129
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/30 (40%), Positives = 24/30 (80%)
Frame = +3
Query: 156 RLSNINAAKAVADAIRTSLGPRGMDKMIQA 245
R+++ A++D ++T+LGP+GMDK++Q+
Sbjct: 19 RMASFVGGMAISDLVKTTLGPKGMDKILQS 48
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
VTITNDGATIL+ + V HPAAK+LVEL+ QD E GDGTTSVV+IA LL L++
Sbjct: 9 VTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVRNK 68
Query: 437 IHPTVISDGFQ 469
IHPT I G++
Sbjct: 69 IHPTSIISGYR 79
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/83 (43%), Positives = 62/83 (74%)
Frame = +2
Query: 260 TITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGI 439
TI+NDGATI++ + +IHPAAK+LV+++++QD E GDGTT+VV++A L A+ ++ G+
Sbjct: 60 TISNDGATIMRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGV 119
Query: 440 HPTVISDGFQKALQLALQVVENM 508
HP + ++ A LA++ V+++
Sbjct: 120 HPHSLIRSYRTAGHLAIEKVKDL 142
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 159 LSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
+SNINA VAD +RT+LGPRGMDK+I G
Sbjct: 26 VSNINACTVVADTVRTTLGPRGMDKLIHDDKG 57
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/85 (43%), Positives = 58/85 (68%)
Frame = +2
Query: 254 KVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQK 433
K+ +TND ATI+ ++ V HPAAK+LV RAQ E GDG + AG LL+ AE+L++
Sbjct: 57 KLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRM 116
Query: 434 GIHPTVISDGFQKALQLALQVVENM 508
G+HP+ I G+ KA+ ++++E++
Sbjct: 117 GLHPSEIIIGYTKAINKTVEILEDL 141
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 159 LSNINAAKAVADAIRTSLGPRGMDKMI 239
L NI+A + ++ RTSLGP GM+KM+
Sbjct: 25 LKNIDACRELSAITRTSLGPNGMNKMV 51
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/85 (37%), Positives = 52/85 (61%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +T DG T+LK+M + +P A M+ + AQD +GDGTTS V+ G L+ +E+ + +G
Sbjct: 53 IKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEG 112
Query: 437 IHPTVISDGFQKALQLALQVVENMQ 511
HP + DGF A + L+ +E +
Sbjct: 113 THPRFLVDGFDVAKRATLEFLEKFK 137
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 165 NINAAKAVADAIRTSLGPRGMDKMIQAANGKLQ 263
NINAAK + D ++T+LGP+G KM+ G ++
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIK 54
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +2
Query: 263 ITNDGATILKQMSVIHPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 430
I NDG T+ K++ + P AK++ + + + AGDGTT+ VV+A ++ K++
Sbjct: 101 IVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVA 160
Query: 431 KGIHPTVISDGFQKALQLALQVVENM 508
G +P I+ G +K + + ++ M
Sbjct: 161 AGANPVQITRGIEKTAKALVSELQKM 186
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +2
Query: 263 ITNDGATILKQMSVIHPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 430
I NDG T+ +++ + P AK++ + + + AGDGTT+ VV+A L+ K++
Sbjct: 105 IVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVA 164
Query: 431 KGIHPTVISDGFQKALQLALQVVENM 508
G +P I+ G +K + ++ ++ +
Sbjct: 165 AGANPVQITRGIEKTAKALVEELKKL 190
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +2
Query: 263 ITNDGATILKQM----SVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 430
+T DG T+ K + S + A ++ +++ A + AGDGTT V+ A+L K +
Sbjct: 165 VTKDGVTVAKSIEFEDSAKNVGANLVKQVAEATNKVAGDGTTCATVLTQAILTEGCKAVA 224
Query: 431 KGIHPTVISDGFQKAL 478
G++ + +G KA+
Sbjct: 225 AGVNVMDLRNGINKAI 240
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +2
Query: 263 ITNDGATILKQMSVIHP----AAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 430
+ NDG TI + + + P A ++ E++ + AGDGTT+ V+A ++ +
Sbjct: 89 VVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVT 148
Query: 431 KGIHPTVISDGFQKALQLALQVVE 502
G +P I G K + ++ +E
Sbjct: 149 SGANPVSIKKGIDKTVHSLVEELE 172
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +2
Query: 263 ITNDGATILKQMSVIHP----AAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 430
+ NDG TI + + + P A ++ E++ + AGDGTT+ V+A ++ +
Sbjct: 84 VVNDGVTIARAIELYDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVT 143
Query: 431 KGIHPTVISDGFQKALQLALQVVE 502
G +P + G K + ++ +E
Sbjct: 144 SGANPVSLKKGIDKTVHGLIEELE 167
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +2
Query: 263 ITNDGATILKQM----SVIHPAAKMLVE----LSRAQDIEAGDGTTSVVVIAGALLDSAE 418
+ NDG TI K + +V H A +L E ++ + GDGTT+ +++A +++
Sbjct: 607 VINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVGDGTTTAIILAREIINLGL 666
Query: 419 KLLQKGIHPTVISDGFQKALQLALQVVE 502
+ G +P + G KA+ + +++
Sbjct: 667 LAVATGANPVALRKGIDKAVHELIGILK 694
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +2
Query: 263 ITNDGATILKQMS----VIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 430
+T DG T+ K + V + A ++ +++ A + AGDGTT V+ A+ K +
Sbjct: 89 VTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCKSVA 148
Query: 431 KGIHPTVISDGFQKALQLALQVVENM 508
G++ + G A+ + ++ M
Sbjct: 149 AGMNAMDLRRGISMAVDAVVTNLKGM 174
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 35.1 bits (77), Expect = 0.053
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 263 ITNDGATILKQMS----VIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 430
+T DG T+ K + V + A ++ +++ A + AGDGTT V+ A+ K +
Sbjct: 118 VTKDGVTVAKSIEFSNRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFAEGCKSVA 177
Query: 431 KGIHPTVISDGFQKALQLALQVVENMQ 511
G++ + G A+ +VV N++
Sbjct: 178 AGMNAMDLRRGISMAVD---EVVTNLK 201
>02_04_0123 +
19961904-19962096,19962836-19963029,19963334-19963465,
19963921-19964038,19964248-19964484,19964576-19964658,
19964777-19965004,19965394-19965470,19965590-19965626,
19965786-19965952,19966156-19966234,19966301-19966378,
19967459-19967575,19967999-19968379,19968453-19968590,
19968680-19968769,19968832-19968840
Length = 785
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/39 (33%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -3
Query: 282 VAPSLVIVTFHWLLESSYPFHEALSLCGWH-QQQLLRHL 169
V S+V++TF W L S+P ++ +++ G++ +QQ L+ +
Sbjct: 688 VFSSMVVITFAWSLMFSHPENQVVTIAGYYSKQQFLKKM 726
>02_04_0127 +
19992651-19993334,19993853-19993885,19994060-19994128,
19994494-19994581,19994627-19995132,19995210-19995503,
19995557-19995906,19996020-19996456,19996718-19996743,
19996995-19997078
Length = 856
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 93 GGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAN 251
GGDA A S +YK + D +++ +A AD++RT L R ++ ++ +A+
Sbjct: 27 GGDASAALSFIYKGWREVRDSASADLRLMRARADSLRT-LADRELEHLLVSAS 78
>11_06_0417 - 23312875-23312925,23314136-23314246,23315073-23315537
Length = 208
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = -1
Query: 194 ISNSFCGIYVAQSDVCRFTFIFIY*RISFNSITAS 90
++ + C ++V + VC F + + R+S +S++ S
Sbjct: 27 VAQAVCAVHVVNAHVCSFALVLYFARVSSSSLSLS 61
>06_03_0908 - 25858909-25859185,25859765-25859892,25860061-25860765,
25860882-25860944,25861031-25861084,25861338-25861514,
25861644-25861813,25862011-25862065,25862220-25862918,
25863110-25863173,25863515-25863723,25866138-25866227,
25866390-25866617
Length = 972
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/65 (36%), Positives = 31/65 (47%)
Frame = +2
Query: 269 NDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPT 448
N GAT L + + +K L LS IE +VVV+ G DS + L G+H T
Sbjct: 861 NHGATRLSVIPIHASRSKALRYLSVRWGIEL----QNVVVLVGETGDSDYEELFGGLHKT 916
Query: 449 VISDG 463
VI G
Sbjct: 917 VILKG 921
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,048,221
Number of Sequences: 37544
Number of extensions: 326747
Number of successful extensions: 816
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -