Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060485.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            29   0.14 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            29   0.14 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.8  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   6.8  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   6.8  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.0  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 362  GDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQL-ALQVVENM 508
            GD T  V+     L+ S+  L  +  HP  I   F+K +Q+ ALQ+  N+
Sbjct: 876  GDWTGVVLPFPANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNI 925


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 362  GDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQL-ALQVVENM 508
            GD T  V+     L+ S+  L  +  HP  I   F+K +Q+ ALQ+  N+
Sbjct: 877  GDWTGVVLPFPANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNI 926


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 549 GSCNITKFQSSFTTLNYF 602
           G  NI     +FTTLNYF
Sbjct: 368 GFINIQAHHPNFTTLNYF 385


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 63  LNINIMAPKAGGDAIKANSSVYKDKSKPTDIR 158
           LN+N+   +AGG ++  N S     S+P+  R
Sbjct: 879 LNLNLDRSEAGGRSLCTNGSSSGRDSQPSSAR 910


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = -3

Query: 336 NSTNIFAAG*ITLICFKIVAPSLVIVTFHWLLESSYPFHEALSLCGWH 193
           +  N++    I  +C+ +    L  +  + L+E S    EA   C W+
Sbjct: 377 DGVNVYGLTVIGYLCYALAQVFLFCIFGNRLIEESSSVMEAAYSCHWY 424


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = -3

Query: 336 NSTNIFAAG*ITLICFKIVAPSLVIVTFHWLLESSYPFHEALSLCGWH 193
           +  N++    I  +C+ +    L  +  + L+E S    EA   C W+
Sbjct: 377 DGVNVYGLTVIGYLCYALAQVFLFCIFGNRLIEESSSVMEAAYSCHWY 424


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 423 SFSAESNNAPAITTTDVVPSPASIS*ARDN 334
           +FS E+N+   +   ++ P+ ASI+   DN
Sbjct: 663 TFSVENNSFGVLKVHELKPNGASIAVTEDN 692


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,459
Number of Sequences: 2352
Number of extensions: 13064
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)