Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060485.seq
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 128 3e-30
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 128 3e-30
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 107 6e-24
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 107 6e-24
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 107 6e-24
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 95 4e-20
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 95 4e-20
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 92 3e-19
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 92 3e-19
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 92 3e-19
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 86 2e-17
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 83 1e-16
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 83 1e-16
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 80 2e-15
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 80 2e-15
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 77 2e-14
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 40 0.002
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 33 0.25
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 28 5.4
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 28 5.4
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 28 5.4
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 28 5.4
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 128 bits (310), Expect = 3e-30
Identities = 70/133 (52%), Positives = 87/133 (65%)
Frame = +2
Query: 242 SSQWKVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 421
S VTITNDGATIL QMSVIHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+
Sbjct: 62 SGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQN 121
Query: 422 LLQKGIHPTVISDGFQKALQLALQVVENMQLQWT*IMKMLCSRQLQHH*IPK*FHNTQLF 601
LL KGIHPT IS+ FQ A A ++++ M L ++ K
Sbjct: 122 LLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWL 181
Query: 602 WAPIAVQAIRAVM 640
AP+AV A++ ++
Sbjct: 182 LAPMAVNAVKKII 194
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 126 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+ NG
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNG 65
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 128 bits (310), Expect = 3e-30
Identities = 70/133 (52%), Positives = 87/133 (65%)
Frame = +2
Query: 242 SSQWKVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 421
S VTITNDGATIL QMSVIHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+
Sbjct: 62 SGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQN 121
Query: 422 LLQKGIHPTVISDGFQKALQLALQVVENMQLQWT*IMKMLCSRQLQHH*IPK*FHNTQLF 601
LL KGIHPT IS+ FQ A A ++++ M L ++ K
Sbjct: 122 LLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWL 181
Query: 602 WAPIAVQAIRAVM 640
AP+AV A++ ++
Sbjct: 182 LAPMAVNAVKKII 194
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 126 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+ NG
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNG 65
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 107 bits (258), Expect = 6e-24
Identities = 50/84 (59%), Positives = 68/84 (80%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
VTITNDGATI+++M V H AK++VELS++QD E GDGTT VVV+AGALL+ AEKL+ +G
Sbjct: 69 VTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRG 128
Query: 437 IHPTVISDGFQKALQLALQVVENM 508
IHP I+DGF A + AL+ ++++
Sbjct: 129 IHPIKIADGFDLACKKALETLDSI 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +3
Query: 162 SNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDG 67
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 107 bits (258), Expect = 6e-24
Identities = 50/84 (59%), Positives = 68/84 (80%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
VTITNDGATI+++M V H AK++VELS++QD E GDGTT VVV+AGALL+ AEKL+ +G
Sbjct: 69 VTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRG 128
Query: 437 IHPTVISDGFQKALQLALQVVENM 508
IHP I+DGF A + AL+ ++++
Sbjct: 129 IHPIKIADGFDLACKKALETLDSI 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +3
Query: 162 SNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDG 67
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 107 bits (258), Expect = 6e-24
Identities = 50/84 (59%), Positives = 68/84 (80%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
VTITNDGATI+++M V H AK++VELS++QD E GDGTT VVV+AGALL+ AEKL+ +G
Sbjct: 69 VTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRG 128
Query: 437 IHPTVISDGFQKALQLALQVVENM 508
IHP I+DGF A + AL+ ++++
Sbjct: 129 IHPIKIADGFDLACKKALETLDSI 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +3
Query: 162 SNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDG 67
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/85 (52%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
V +TNDGATILKQ+ V HPA K+LVEL++ QD E GDGTTSVV++A LL A++L+++
Sbjct: 56 VIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQK 115
Query: 437 IHPTVISDGFQKALQLALQVV-ENM 508
+HPT I +G++ A + A++ + EN+
Sbjct: 116 VHPTTIINGYRLACKEAVKYISENI 140
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +3
Query: 153 IRLSNINAAKAVADAIRTSLGPRGMDKMI 239
IR N+ AA A+A+ +++SLGP G+DKM+
Sbjct: 21 IRSQNVTAAVAIANIVKSSLGPVGLDKML 49
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/85 (52%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
V +TNDGATILKQ+ V HPA K+LVEL++ QD E GDGTTSVV++A LL A++L+++
Sbjct: 56 VIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQK 115
Query: 437 IHPTVISDGFQKALQLALQVV-ENM 508
+HPT I +G++ A + A++ + EN+
Sbjct: 116 VHPTTIINGYRLACKEAVKYISENI 140
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +3
Query: 153 IRLSNINAAKAVADAIRTSLGPRGMDKMI 239
IR N+ AA A+A+ +++SLGP G+DKM+
Sbjct: 21 IRSQNVTAAVAIANIVKSSLGPVGLDKML 49
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/87 (49%), Positives = 62/87 (71%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +TNDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL+ +
Sbjct: 58 IKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQR 117
Query: 437 IHPTVISDGFQKALQLALQVVENMQLQ 517
IHP I G+++AL +A + ++ ++
Sbjct: 118 IHPQTIISGYRRALGIAQESLKKSSIE 144
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 156 RLSNINAAKAVADAIRTSLGPRGMDKMIQAAN 251
RLS+ A A+ D ++++LGP+GMDK++ + N
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGN 51
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 526 NNEDALLKAAATSLNSKVVSQH 591
N D LLK A T+L SK++SQH
Sbjct: 148 NIRDDLLKIARTTLGSKILSQH 169
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/87 (49%), Positives = 62/87 (71%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +TNDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL+ +
Sbjct: 58 IKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQR 117
Query: 437 IHPTVISDGFQKALQLALQVVENMQLQ 517
IHP I G+++AL +A + ++ ++
Sbjct: 118 IHPQTIISGYRRALGIAQESLKKSSIE 144
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 156 RLSNINAAKAVADAIRTSLGPRGMDKMIQAAN 251
RLS+ A A+ D ++++LGP+GMDK++ + N
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGN 51
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 526 NNEDALLKAAATSLNSKVVSQH 591
N D LLK A T+L SK++SQH
Sbjct: 148 NIRDDLLKIARTTLGSKILSQH 169
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/87 (49%), Positives = 62/87 (71%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +TNDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL+ +
Sbjct: 58 IKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQR 117
Query: 437 IHPTVISDGFQKALQLALQVVENMQLQ 517
IHP I G+++AL +A + ++ ++
Sbjct: 118 IHPQTIISGYRRALGIAQESLKKSSIE 144
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 156 RLSNINAAKAVADAIRTSLGPRGMDKMIQAAN 251
RLS+ A A+ D ++++LGP+GMDK++ + N
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGN 51
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 526 NNEDALLKAAATSLNSKVVSQH 591
N D LLK A T+L SK++SQH
Sbjct: 148 NIRDDLLKIARTTLGSKILSQH 169
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/83 (44%), Positives = 61/83 (73%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +TNDG IL++++V HPAAK ++E++R QD E GDGTTSV+++AG ++ A+ L++
Sbjct: 59 IVMTNDGNAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQK 118
Query: 437 IHPTVISDGFQKALQLALQVVEN 505
HPT+I +++AL+ +Q EN
Sbjct: 119 THPTLIIKAYRQALEDMIQWSEN 141
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 153 IRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
+++ NINA K +AD IRTSLGPR M KM+ G
Sbjct: 24 VQIGNINACKTIADVIRTSLGPRAMLKMLMDPMG 57
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/91 (39%), Positives = 62/91 (68%)
Frame = +2
Query: 245 SQWKVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 424
S+ TI+NDGATILK + ++ PAA +V+++R+QD E GDGTTSVVV+A +L +
Sbjct: 52 SKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPF 111
Query: 425 LQKGIHPTVISDGFQKALQLALQVVENMQLQ 517
++ G+HP ++ KA + L+ + +++++
Sbjct: 112 IEDGVHPQLLIRAIGKACEKTLKNLADLEIK 142
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 159 LSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
+SNINA + VAD+IRT+LGPRG+DK+I + G
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKG 54
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/91 (39%), Positives = 62/91 (68%)
Frame = +2
Query: 245 SQWKVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 424
S+ TI+NDGATILK + ++ PAA +V+++R+QD E GDGTTSVVV+A +L +
Sbjct: 52 SKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPF 111
Query: 425 LQKGIHPTVISDGFQKALQLALQVVENMQLQ 517
++ G+HP ++ KA + L+ + +++++
Sbjct: 112 IEDGVHPQLLIRAIGKACEKTLKNLADLEIK 142
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 159 LSNINAAKAVADAIRTSLGPRGMDKMIQAANG 254
+SNINA + VAD+IRT+LGPRG+DK+I + G
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKG 54
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +T DG +L +M++ HP A M+ + S AQD GDGTTS V++ G LL AE L+ +G
Sbjct: 54 IKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEG 113
Query: 437 IHPTVISDGFQKALQLALQVVENMQ 511
+HP ++++GF+ A L+++E +
Sbjct: 114 LHPRIVTEGFEWANTKTLELLEKFK 138
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +3
Query: 165 NINAAKAVADAIRTSLGPRGMDKMIQAANGKLQ 263
NI+ A+ + D +R++LGP+G KM+ + G ++
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIK 55
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +2
Query: 257 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 436
+ +T DG +L +M++ HP A M+ + S AQD GDGTTS V++ G LL AE L+ +G
Sbjct: 54 IKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEG 113
Query: 437 IHPTVISDGFQKALQLALQVVENMQ 511
+HP ++++GF+ A L+++E +
Sbjct: 114 LHPRIVTEGFEWANTKTLELLEKFK 138
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +3
Query: 165 NINAAKAVADAIRTSLGPRGMDKMIQAANGKLQ 263
NI+ A+ + D +R++LGP+G KM+ + G ++
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIK 55
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 76.6 bits (180), Expect = 2e-14
Identities = 31/85 (36%), Positives = 59/85 (69%)
Frame = +2
Query: 254 KVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQK 433
K+ +TND ATILK++ + HPAA++++ + Q+ + GD T +VV++A ALL+ A L+
Sbjct: 61 KLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHM 120
Query: 434 GIHPTVISDGFQKALQLALQVVENM 508
G+ P ++ G+++A + AL+++ +
Sbjct: 121 GMTPQEVAAGYEQAAEKALEILPTL 145
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 165 NINAAKAVADAIRTSLGPRGMDKMI 239
NI A +A IR++ GP GM+KM+
Sbjct: 31 NIEACTELASQIRSAYGPNGMNKMV 55
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +2
Query: 263 ITNDGATILKQMSVIHP----AAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 430
IT DG T+ K + + AK++ +++ + EAGDGTT V+A A+ + ++
Sbjct: 64 ITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIR 123
Query: 431 KGIHPTVISDGFQKALQLALQVVENMQLQWT 523
+G + I G A+++ + ++ + + T
Sbjct: 124 QGGNAVEIRRGVMNAVEVVVAELKKISKKVT 154
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +2
Query: 263 ITNDGATILKQMSVIHP----AAKMLVELSRAQDIEAGDGTTSVVVIAGALL-DSAEKLL 427
IT DG T+ K + + AK++ +++ + EAGDGTT V+ A+ + E+
Sbjct: 64 ITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHS 123
Query: 428 QKGIHPTVISDGFQKALQLALQVVENMQLQWT 523
+G + I G A+++ + ++ + + T
Sbjct: 124 SRG-NAVEIRRGVMNAVEVVVAELKKISKKVT 154
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 278 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 424
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 278 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 424
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 278 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 424
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 295 NECYSSSCKNVGRIISCSRY*SW*WNNISSCYC 393
N + SC+ R SCSR SW SS +C
Sbjct: 9 NYAFEDSCRKSTRTSSCSRRDSWNGETRSSSHC 41
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 537 CFAQGSCNITKFQSSFTTLNYF-GHP 611
C Q C+ KF++SF +NYF HP
Sbjct: 681 CGKQTWCDSGKFENSFDLINYFSAHP 706
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 90 AGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRT 206
A GD K KDK+KP+ +RL +A +V DA +T
Sbjct: 15 ASGDIEKKKKKKNKDKNKPSGLRLIEEDAFLSV-DAAKT 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,927,528
Number of Sequences: 27780
Number of extensions: 301022
Number of successful extensions: 987
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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