Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060484.seq
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   1.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   1.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   2.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   5.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +2

Query: 221 DYIN-ANYVDGYNRRTPTFVH 280
           +YIN  NYV GY    P + H
Sbjct: 370 NYINHQNYVQGYQGEHPNYNH 390


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +2

Query: 167 YDHSRVLLSQTDPDDPTTDYINANYVDGYNRRTPTFVHRVLYRRRSVT 310
           Y+H  ++   T  +    + +  N   G       FVH  + +R S+T
Sbjct: 298 YNHVPMIFGYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSIT 345


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +2

Query: 167 YDHSRVLLSQTDPDDPTTDYINANYVDGYNRRTPTFVHRVLYRRRSVT 310
           Y+H  ++   T  +    + +  N   G       FVH  + +R S+T
Sbjct: 298 YNHVPMIFGYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSIT 345


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +2

Query: 221 DYIN-ANYVDGYNRRTPTFVH 280
           +YIN  NYV GY    P + H
Sbjct: 318 NYINHQNYVQGYQGEHPNYNH 338


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +2

Query: 167 YDHSRVLLSQTDPDDPTTDYINANYVDGYNRRTPTFVHRVLYRRRSVT 310
           Y+H  ++   T  +    + +  N   G       FVH  + +R S+T
Sbjct: 296 YNHVPMIFGYTTREGMIVEMMRKNETPGMPNDFEGFVHPTVAKRGSIT 343


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 61  EAPAPHEPQAGQQPAGVSRA 2
           + P   +P  GQQP G + A
Sbjct: 207 QPPIQQQPNQGQQPPGNTAA 226


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 61  EAPAPHEPQAGQQPAGVSRA 2
           + P   +P  GQQP G + A
Sbjct: 209 QPPIQQQPNQGQQPPGNTAA 228


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 433  GPYAVLAEDVIQHDD 477
            GPYA L+   + +DD
Sbjct: 2625 GPYAYLSNQWVSYDD 2639


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 462 DPARRLHDQLAGADGALN 515
           D   R HDQL    GA+N
Sbjct: 233 DICMRCHDQLCDMCGAIN 250


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/48 (20%), Positives = 19/48 (39%)
 Frame = +2

Query: 167 YDHSRVLLSQTDPDDPTTDYINANYVDGYNRRTPTFVHRVLYRRRSVT 310
           Y+H  ++   T  +    + +      G       FVH  + +R S+T
Sbjct: 296 YNHVPMIFGYTTREGMIVEMMRKTETPGMPNDFEEFVHPTVAKRGSIT 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,985
Number of Sequences: 336
Number of extensions: 1031
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)