Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060484.seq
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             63   6e-12

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 62.9 bits (146), Expect = 6e-12
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = +1

Query: 262 NAYICTQGPLPXTFGDFXRMVWEQGTVVIXMTTRVMERGRVKCGQY 399
           NAY+ TQGPL  TFGDF RM WE  +  I M TR+ ER R+KC  Y
Sbjct: 742 NAYVATQGPLQETFGDFWRMCWELKSSTIVMMTRLEERSRIKCTMY 787



 Score = 54.8 bits (126), Expect = 2e-09
 Identities = 24/57 (42%), Positives = 31/57 (54%)
 Frame = +1

Query: 259  KNAYICTQGPLPXTFGDFXRMVWEQGTVVIXMTTRVMERGRVKCGQYXXXXXXXRQQ 429
            +  YI  QGPL  T  DF RM+WE  + ++ M T++ E GR KC QY       R Q
Sbjct: 1030 RKRYIAAQGPLQETAEDFWRMLWEHNSTIVVMLTKLKEMGREKCFQYWPHERSVRYQ 1086



 Score = 54.4 bits (125), Expect = 2e-09
 Identities = 28/64 (43%), Positives = 38/64 (59%)
 Frame = +2

Query: 68  EYDEIRSRPPVGTFHNAKLPSNLSKNRYTDVLCYDHSRVLLSQTDPDDPTTDYINANYVD 247
           EY+ I       T+ ++ +  N  KNRY +V  YDHSRV+L   +   P +DYINANY D
Sbjct: 679 EYESIEPGQQF-TWDHSNMEVNKPKNRYANVTSYDHSRVILPPIE-RVPGSDYINANYCD 736

Query: 248 GYNR 259
           GY +
Sbjct: 737 GYRK 740



 Score = 40.3 bits (90), Expect = 4e-05
 Identities = 23/52 (44%), Positives = 29/52 (55%)
 Frame = +2

Query: 107  FHNAKLPSNLSKNRYTDVLCYDHSRVLLSQTDPDDPTTDYINANYVDGYNRR 262
            F  A LP N  K R   +L Y+ SRV L+     +  +DYINA+ VDGY  R
Sbjct: 980  FVTANLPCNKHKTRVPHILPYESSRVCLTPIRGVE-GSDYINASLVDGYRYR 1030


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,475
Number of Sequences: 2352
Number of extensions: 5738
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)