Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060478.seq
(684 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 28 0.082
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 25 0.44
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 25 0.44
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 24 1.3
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 4.1
DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 22 5.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 7.1
AM295016-1|CAL25731.1| 96|Tribolium castaneum ecdysone recepto... 21 7.1
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 9.4
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 9.4
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.4
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.4
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 27.9 bits (59), Expect = 0.082
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 523 YPLLQMYYTILIASTMKGXLFVLIKLGYIYNHXIIYC 633
Y L ++YY ++ T L L+ GY H + YC
Sbjct: 51 YNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYC 87
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 25.4 bits (53), Expect = 0.44
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -2
Query: 359 PQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLWG 249
P +++ + + HH + H Q HH QQ ++G
Sbjct: 155 PPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYG 191
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 25.4 bits (53), Expect = 0.44
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -2
Query: 359 PQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLWG 249
P +++ + + HH + H Q HH QQ ++G
Sbjct: 157 PPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYG 193
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 477 GLLNAQCPLELTHIHISAPTNVLHHTD 557
GLL + PL IH A N+ HH +
Sbjct: 361 GLLPVRPPLTREEIHEKARENLKHHAN 387
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 503 RVNSHPHIRSYKC 541
+VNSH I+++KC
Sbjct: 192 KVNSHGKIKTFKC 204
>DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13
protein.
Length = 377
Score = 21.8 bits (44), Expect = 5.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 456 SPKLYMLGLLNAQCPLELTHIHISAPTNVLHHTDSLYYEGXALCA 590
+PK Y+L + P E+ I A +NVL + + Y+ A+ A
Sbjct: 165 APKGYLLTVAVNSIPGEVGGYDIPAMSNVLDIINVMTYDFHAMWA 209
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +3
Query: 198 KKVEAAESNGKENGTDEAPKIRLLKMVMLKKATMHLRTVMPQKRK 332
K+ +NG GT + ++ +K + + +VM ++RK
Sbjct: 1440 KRFAKLNANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERRK 1484
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +3
Query: 198 KKVEAAESNGKENGTDEAPKIRLLKMVMLKKATMHLRTVMPQKRK 332
K+ +NG GT + ++ +K + + +VM ++RK
Sbjct: 1440 KRFAKLNANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERRK 1484
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +3
Query: 198 KKVEAAESNGKENGTDEAPKIRLLKMVMLKKATMHLRTVMPQKRK 332
K+ +NG GT + ++ +K + + +VM ++RK
Sbjct: 1440 KRFAKLNANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERRK 1484
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +3
Query: 198 KKVEAAESNGKENGTDEAPKIRLLKMVMLKKATMHLRTVMPQKRK 332
K+ +NG GT + ++ +K + + +VM ++RK
Sbjct: 1440 KRFAKLNANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERRK 1484
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 254 KDSPAENGDAEESN--DASENGDATEKKETGVKRKSV 358
K+ E+ D ++ D E+ D KKE K+K++
Sbjct: 233 KEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTI 269
>AM295016-1|CAL25731.1| 96|Tribolium castaneum ecdysone receptor
(isoform B) protein.
Length = 96
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 135 VAPEEVTSTEPKESPVKKSPAKKVEAAE 218
VAPEE +S S + SPA + + +
Sbjct: 9 VAPEESSSEVTSSSALVMSPANSLASTD 36
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.0 bits (42), Expect = 9.4
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 141 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPK 257
PE+ TST + + V + A A + E APK
Sbjct: 438 PEKSTSTTQRTTTVSTTEAPPAPAVSNPQNEVDGSVAPK 476
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 380 LLFLHQEPQISSSHQSLSFL 321
+ F EP+ S HQ L+ L
Sbjct: 116 ITFYRDEPRFSQPHQILTLL 135
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 380 LLFLHQEPQISSSHQSLSFL 321
+ F EP+ S HQ L+ L
Sbjct: 276 ITFYRDEPRFSQPHQILTLL 295
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 380 LLFLHQEPQISSSHQSLSFL 321
+ F EP+ S HQ L+ L
Sbjct: 276 ITFYRDEPRFSQPHQILTLL 295
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,592
Number of Sequences: 336
Number of extensions: 2443
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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