Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060478.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    28   0.32 
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    26   1.3  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   3.9  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   6.8  

>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 350 SSSHQSLSFLWHHRSQMHRCFLQHHHFQQ 264
           +SS Q   F  HH+ Q +   + HHH QQ
Sbjct: 18  ASSSQRSPFHHHHQQQQNHQRMPHHHQQQ 46


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 108 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 224
           +DA    K+    E+   E K+ PVKK P  K++  + N
Sbjct: 65  SDAREMMKKFKVGELIEAERKQIPVKKEPDWKMDQQDDN 103


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 102 TMADAAVDKKEVAPEEVTSTEPKESPVKKSP 194
           T    AV      P E+  T+P  SP++ +P
Sbjct: 171 TNTTIAVQPAPTQPHELVGTDPLSSPLQAAP 201


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -2

Query: 368 HQEPQISSSHQSLSFLW-HHRSQMHRCFLQHHHFQQANLWGF 246
           H  P + S+    S    HH    H     HHH   A+L G+
Sbjct: 480 HVSPGMGSTVNGASLTHSHHAHPHHHHHHHHHHPTAADLAGY 521


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,630
Number of Sequences: 2352
Number of extensions: 9933
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)