Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060475.seq
(646 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 152 6e-36
UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor... 105 1e-21
UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor... 101 1e-20
UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor... 97 2e-19
UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release fa... 96 7e-19
UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic... 88 1e-16
UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=... 88 2e-16
UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;... 84 2e-15
UniRef50_UPI0000D9F481 Cluster: PREDICTED: similar to eukaryotic... 82 1e-14
UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative; ... 74 3e-12
UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;... 59 8e-08
UniRef50_UPI000150A1F7 Cluster: eRF1 domain 1 family protein; n=... 58 1e-07
UniRef50_Q46FF0 Cluster: Peptide chain release factor, subunit 1... 57 4e-07
UniRef50_Q8TS00 Cluster: Peptide chain release factor subunit 1-... 56 7e-07
UniRef50_A7DMG3 Cluster: ERF1 domain 2 protein; n=1; Candidatus ... 54 2e-06
UniRef50_A0RX46 Cluster: Peptide chain release factor 1; n=2; Cr... 41 0.022
UniRef50_Q9HNF0 Cluster: Peptide chain release factor subunit 1;... 39 0.090
UniRef50_Q9USL5 Cluster: Translation release factor eRF1; n=1; S... 38 0.27
UniRef50_Q74N59 Cluster: NEQ052; n=1; Nanoarchaeum equitans|Rep:... 37 0.36
UniRef50_Q315P5 Cluster: Diguanylate cyclase/phosphodiesterase (... 35 1.5
UniRef50_A6A4M8 Cluster: Glycosyl transferase, group 1; n=2; Vib... 35 1.5
UniRef50_Q0QZI1 Cluster: Gp47; n=1; Phage Syn9|Rep: Gp47 - Phage... 35 1.5
UniRef50_Q4Q2C5 Cluster: Dynein heavy chain, putative; n=8; Tryp... 34 2.6
UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;... 34 2.6
UniRef50_UPI00015B42E6 Cluster: PREDICTED: similar to LD13710p; ... 34 3.4
UniRef50_A4G8Z9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q479I8 Cluster: Cation efflux protein; n=1; Dechloromon... 33 4.5
UniRef50_UPI0000E4615C Cluster: PREDICTED: similar to TamA; n=1;... 33 5.9
UniRef50_Q3E9C2 Cluster: Uncharacterized protein At5g19310.1; n=... 33 7.8
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 152 bits (369), Expect = 6e-36
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TRLSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDE 184
T LSQSDMFD RLQ+K++KLVD+SYGGENGFNQAIEL+ E L NVKFIQEKKLIGRYFDE
Sbjct: 234 TELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDE 293
Query: 185 ISQDTGKYCFGVDDTLRALELGS 253
ISQDTGKYCFGV+DTL+ALE+G+
Sbjct: 294 ISQDTGKYCFGVEDTLKALEMGA 316
Score = 118 bits (283), Expect = 2e-25
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
E LI +ENLDI RYVL T +E IL+LTPEQEKDKSHFTDKE+G E EL+E PLLEW
Sbjct: 318 EILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEW 377
Query: 436 LANNYKSFGATLESSRTRAR-GKQFV 510
ANNYK FGATLE +++ G QFV
Sbjct: 378 FANNYKKFGATLEIVTDKSQEGSQFV 403
>UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=6; Trypanosomatidae|Rep: Eukaryotic peptide
chain release factor subunit 1 - Trypanosoma brucei
brucei
Length = 452
Score = 105 bits (251), Expect = 1e-21
Identities = 47/81 (58%), Positives = 65/81 (80%)
Frame = +2
Query: 11 LSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEIS 190
L QSD+FDPRL+A ++K+VDV++ G+ G NQAI+LAA++L VK +QEKKL+ +FD+I+
Sbjct: 237 LYQSDLFDPRLKAIVVKVVDVAHPGDVGLNQAIDLAADALSGVKLVQEKKLLQGFFDQIA 296
Query: 191 QDTGKYCFGVDDTLRALELGS 253
DT YCFGV DTL+ LE G+
Sbjct: 297 CDTQLYCFGVQDTLKCLEAGA 317
Score = 65.7 bits (153), Expect = 9e-10
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 ETLICWENLDIQRY-VLKSH-ATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLL 429
ETLI +E+L+I RY V+K+ A ++ET +H+ E+E +S+ +ESG +E + +
Sbjct: 319 ETLIVYEDLNIYRYTVVKNRGADDEETFVHVMSEEEAKRSNIHMQESGKTRNEIEQEDFV 378
Query: 430 EWLANNYKSFGATLESSRTRAR-GKQFV 510
+WLA NY+ FG LE R++ G QFV
Sbjct: 379 DWLATNYRKFGCALELITNRSQEGTQFV 406
>UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=5; Eukaryota|Rep: Eukaryotic peptide chain
release factor subunit 1 - Loxodes striatus
Length = 436
Score = 101 bits (242), Expect = 1e-20
Identities = 42/81 (51%), Positives = 66/81 (81%)
Frame = +2
Query: 11 LSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEIS 190
L+ ++ D R++AK++ ++DV+YGGENGFNQAIEL+ LQNVKFI+EK LI + F+E++
Sbjct: 234 LAANEYLDQRIRAKVVTIIDVNYGGENGFNQAIELSQVQLQNVKFIKEKNLITKLFEEVA 293
Query: 191 QDTGKYCFGVDDTLRALELGS 253
Q++ C+G+ DT++ALE+G+
Sbjct: 294 QNSITVCYGLTDTMKALEMGA 314
Score = 79.0 bits (186), Expect = 9e-14
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
ETL+ WENL+ + LK+ T +E+ + L+P+Q +K+HF D+ + EL +VE L EW
Sbjct: 316 ETLVIWENLEFIWFKLKNPVTKEESTVVLSPQQATEKNHFQDEANQCELNIVERFALTEW 375
Query: 436 LANNYKSFGATLESSRTRAR-GKQFV 510
L +NYK++GA LE R++ G QFV
Sbjct: 376 LIDNYKNYGARLEFVTDRSQEGSQFV 401
>UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=2; Giardia intestinalis|Rep: Eukaryotic
peptide chain release factor subunit 1 - Giardia lamblia
(Giardia intestinalis)
Length = 457
Score = 97.5 bits (232), Expect = 2e-19
Identities = 41/84 (48%), Positives = 64/84 (76%)
Frame = +2
Query: 11 LSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEIS 190
LS S +FD RLQ+ ++K +D++YGGE GFNQAIE+A ++L++VK IQE KL+ + + I+
Sbjct: 246 LSTSAIFDQRLQSIVMKQIDINYGGEQGFNQAIEMAGDTLKDVKLIQEVKLLTEFTENIA 305
Query: 191 QDTGKYCFGVDDTLRALELGSARR 262
+DT + CFG+ DT+R LE+ + +
Sbjct: 306 KDTKRVCFGITDTIRCLEMSAVEK 329
Score = 49.2 bits (112), Expect = 8e-05
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLK---SHATNQETILHLTPEQEKDKSHFTDKESG--VELELVECQ 420
E LI W++L R L+ + T+ I +L Q + + + +G V+L+++ Q
Sbjct: 328 EKLIVWDDLPYHRVTLQCVINGETSAPVIKYLLKSQMSNPKYLREVINGEEVQLDIMGDQ 387
Query: 421 PLLEWLANNYKSFGATLESSRTR-ARGKQF 507
LLEW +NYK++GA+LE R A G QF
Sbjct: 388 LLLEWFVDNYKNYGASLEFITNRSAEGTQF 417
>UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release
factor 1; n=3; Paramecium tetraurelia|Rep: Eukaryotic
polypeptide chain release factor 1 - Paramecium
tetraurelia
Length = 437
Score = 95.9 bits (228), Expect = 7e-19
Identities = 42/78 (53%), Positives = 59/78 (75%)
Frame = +2
Query: 11 LSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEIS 190
L+ S FD RLQ II +VD++YGGE G NQA++L+ ESL VK+I+EK L+G++F+ I
Sbjct: 237 LAGSQFFDKRLQPLIISVVDINYGGEQGLNQAVQLSQESLLEVKYIREKNLVGQFFENID 296
Query: 191 QDTGKYCFGVDDTLRALE 244
+DTG +GV DT+RA+E
Sbjct: 297 KDTGLVVYGVQDTMRAVE 314
>UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic
release factor 1 CG5605-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to eukaryotic release
factor 1 CG5605-PA, isoform A - Apis mellifera
Length = 265
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Frame = +1
Query: 319 NQETILH-LTPEQEK--DKSHFTDKESGVELELVECQPLLEWLANNYKSFGATLESSRTR 489
N +LH T + K DK+HFTDKESGVELELVECQPLLEWLANNYKSFGATLE +
Sbjct: 164 NTREVLHKFTVDLPKKHDKTHFTDKESGVELELVECQPLLEWLANNYKSFGATLEIITDK 223
Query: 490 AR-GKQFV 510
++ G QFV
Sbjct: 224 SQEGSQFV 231
>UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=1;
Guillardia theta|Rep: Eukaryotic release factor 1
homolog - Guillardia theta (Cryptomonas phi)
Length = 409
Score = 87.8 bits (208), Expect = 2e-16
Identities = 38/80 (47%), Positives = 59/80 (73%)
Frame = +2
Query: 11 LSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEIS 190
L S++F+ +L+ KI+ ++D+SYGGE GFN+AIE ++ L +K I+EKK+I +FDEI
Sbjct: 233 LISSELFNEKLREKILSIIDISYGGEIGFNKAIENSSSVLDQLKCIKEKKIIESFFDEIE 292
Query: 191 QDTGKYCFGVDDTLRALELG 250
+DTGKY +G ++T +L G
Sbjct: 293 KDTGKYVYGCEETCNSLTNG 312
>UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;
n=1; Encephalitozoon cuniculi|Rep: PEPTIDE CHAIN RELEASE
FACTOR SUBUNIT 1 - Encephalitozoon cuniculi
Length = 386
Score = 84.2 bits (199), Expect = 2e-15
Identities = 36/78 (46%), Positives = 60/78 (76%)
Frame = +2
Query: 20 SDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDT 199
+ + D R+Q +IK VD +YGGE+G NQAIEL + L++VK +EKK++ R+F+EI+ ++
Sbjct: 230 AQVLDSRIQ--VIKAVDTNYGGESGLNQAIELCEDVLKDVKLSKEKKILQRFFNEINTES 287
Query: 200 GKYCFGVDDTLRALELGS 253
G++CF + DT++ LE+G+
Sbjct: 288 GRFCFTMRDTMQCLEMGA 305
>UniRef50_UPI0000D9F481 Cluster: PREDICTED: similar to eukaryotic
translation termination factor 1; n=2; Macaca
mulatta|Rep: PREDICTED: similar to eukaryotic
translation termination factor 1 - Macaca mulatta
Length = 136
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/73 (58%), Positives = 50/73 (68%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
ETLI +ENLD + + S ++ LTPEQEKD SHF DKE+G E EL+E PLLEW
Sbjct: 21 ETLIVFENLDNE--ICSSLTKHRRGENSLTPEQEKDTSHFIDKETGWEHELIESIPLLEW 78
Query: 436 LANNYKSFGATLE 474
ANNYK GATLE
Sbjct: 79 FANNYKKCGATLE 91
Score = 34.3 bits (75), Expect = 2.6
Identities = 11/18 (61%), Positives = 18/18 (100%)
Frame = +2
Query: 200 GKYCFGVDDTLRALELGS 253
GKYCFG++D+L+AL++G+
Sbjct: 2 GKYCFGIEDSLKALKMGA 19
>UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative;
n=2; Trichomonas vaginalis|Rep: Eukaryotic release
factor 1, putative - Trichomonas vaginalis G3
Length = 438
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/81 (41%), Positives = 56/81 (69%)
Frame = +2
Query: 11 LSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEIS 190
L+QSD+FD RL+ I+ + D+ YGGE GFNQ I++AA L +V+ ++E++L+ + FD I
Sbjct: 238 LAQSDLFDIRLRNIILGIYDICYGGEEGFNQTIKMAAPLLADVRLVREQELLQKLFDTIG 297
Query: 191 QDTGKYCFGVDDTLRALELGS 253
+ G FG+ +T+ A + G+
Sbjct: 298 TN-GPCAFGIKETMMAYDSGA 317
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
ET+I W+ L++ R ++ + E + + T Q + H + ++ +++ L EW
Sbjct: 319 ETMILWDELNVYRCTMEKDNGDSE-VEYYTEYQLEKGDHLKSEYHHLKEKIL----LTEW 373
Query: 436 LANNYKSFGATLESSRTRA-RGKQFV 510
+A+++K GA LE ++ G QF+
Sbjct: 374 MADHHKEKGAKLEFVTDKSPEGAQFI 399
>UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;
n=5; Archaea|Rep: Peptide chain release factor subunit 1
- Pyrococcus furiosus
Length = 420
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +2
Query: 17 QSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQD 196
+ D L+ KII +VD+SY GE G + + AA+ L++ + I+E+ L+ + I +D
Sbjct: 236 EGDYLHHELKKKIIGIVDISYHGEYGLRELVAKAADILRDHEVIRERNLVNEFLKHIVKD 295
Query: 197 TGKYCFGVDDTLRALELGS 253
TG +G + +ALELG+
Sbjct: 296 TGLATYGEREVRKALELGA 314
>UniRef50_UPI000150A1F7 Cluster: eRF1 domain 1 family protein; n=1;
Tetrahymena thermophila SB210|Rep: eRF1 domain 1 family
protein - Tetrahymena thermophila SB210
Length = 519
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +2
Query: 35 PRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCF 214
P ++ KI+ DVSY G+ G QA++++ E L+ + QE L+ +F S +T K +
Sbjct: 309 PCIENKIVASYDVSYSGQAGLKQALQMSTEMLKLDQLFQEMNLLSDFFANFSLETSKVVY 368
Query: 215 GVDDTLRALELGSARR 262
G + T+RALE G+ ++
Sbjct: 369 GGELTVRALEEGNVKK 384
Score = 39.5 bits (88), Expect = 0.068
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Frame = +1
Query: 250 IRETLICWENLDIQRYVLKSHATNQETILHLTPEQEK----DKSHFTDKESG---VELEL 408
+++ ++C ++ ++QR + + T +ETI +L P Q K S +D+E+ +L++
Sbjct: 382 VKKLILCQDS-ELQRVTVYNSKTQEETIQYLMPSQVKALQDSISKTSDQEANNKKNQLQV 440
Query: 409 VECQPLLEWLANNYKSFGATLE----SSRTRARGKQFVAASRDGGSSVQSDFHRCS-SRQ 573
Q + EW+ N SF LE S +T+ +G QF + + G+ ++ S Q
Sbjct: 441 YSQQNINEWIVENISSFSQDLEIVFVSDKTQ-QGVQFSKSFQGVGAYLKYSLDYSSLHAQ 499
Query: 574 EIDNLTTSTLYC 609
E +N YC
Sbjct: 500 EKENDQLEQEYC 511
>UniRef50_Q46FF0 Cluster: Peptide chain release factor, subunit 1;
n=2; Methanosarcinaceae|Rep: Peptide chain release
factor, subunit 1 - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 415
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 41 LQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGV 220
LQ K++ L D Y E+GF++ I A ++LQ + I++KK I +F E++ ++GK +G
Sbjct: 241 LQNKVLGLFDTEYTDESGFSELINAAEDTLQGIDLIKQKKDIEMFFKELTTESGKVSYGE 300
Query: 221 DDTLRALEL 247
D+ LEL
Sbjct: 301 DNVRANLEL 309
>UniRef50_Q8TS00 Cluster: Peptide chain release factor subunit 1-2;
n=9; Euryarchaeota|Rep: Peptide chain release factor
subunit 1-2 - Methanosarcina acetivorans
Length = 415
Score = 56.0 bits (129), Expect = 7e-07
Identities = 25/69 (36%), Positives = 44/69 (63%)
Frame = +2
Query: 41 LQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGV 220
LQ K++ L D Y E+GF++ I A E+LQ++ +++KK + +F EI+ ++GK +G
Sbjct: 241 LQKKVLGLFDTGYTDESGFSELINAAEETLQSIDLLKQKKDMEIFFKEIATESGKISYGE 300
Query: 221 DDTLRALEL 247
D+ LE+
Sbjct: 301 DNVRANLEI 309
>UniRef50_A7DMG3 Cluster: ERF1 domain 2 protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: ERF1 domain 2 protein
- Candidatus Nitrosopumilus maritimus SCM1
Length = 426
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +2
Query: 38 RLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFG 217
RLQ II +D SY G G +A +++ L N + ++EKKL+ F EI+ +TGK +G
Sbjct: 247 RLQNNIIATIDSSYSGSEGIREAFAKSSDILGNFRLVEEKKLVEALFREINGNTGKGSYG 306
Query: 218 VDDTLRALE 244
+ + + L+
Sbjct: 307 LQEVIDFLK 315
>UniRef50_A0RX46 Cluster: Peptide chain release factor 1; n=2;
Crenarchaeota|Rep: Peptide chain release factor 1 -
Cenarchaeum symbiosum
Length = 411
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 38 RLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFG 217
RLQ +I +D SY G G ++ +A L + + ++E L+ + F E++ +G +G
Sbjct: 234 RLQEMVIATLDTSYSGSEGIRESFAKSASVLSDFRMVEEGALVEKLFREVNSHSGLGAYG 293
>UniRef50_Q9HNF0 Cluster: Peptide chain release factor subunit 1;
n=7; Euryarchaeota|Rep: Peptide chain release factor
subunit 1 - Halobacterium salinarium (Halobacterium
halobium)
Length = 416
Score = 39.1 bits (87), Expect = 0.090
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 23 DMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTG 202
D LQ K++ DVSY E+G + ++ +L + +K + +F+E+ + G
Sbjct: 241 DYLHHELQDKVLGKFDVSYTDESGLSDLVDAGQAALAEADLMDDKSDMEEFFEEL--NGG 298
Query: 203 KYC-FGVDDTLRALELGSARR 262
K +G + T R L +GS R
Sbjct: 299 KLATYGFEQTRRNLIMGSVDR 319
>UniRef50_Q9USL5 Cluster: Translation release factor eRF1; n=1;
Schizosaccharomyces pombe|Rep: Translation release
factor eRF1 - Schizosaccharomyces pombe (Fission yeast)
Length = 390
Score = 37.5 bits (83), Expect = 0.27
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +2
Query: 74 SYGGENGFNQAI-ELAAES-LQNVKFIQEKKLIGRYFDEISQDTGKYCFGVDDTLRALEL 247
S G + N+ + + A ES L + K++QE +++ +++D +++D K +G + L+A EL
Sbjct: 246 STGHIHSLNEILKDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVLKAFEL 305
Query: 248 GS 253
G+
Sbjct: 306 GA 307
>UniRef50_Q74N59 Cluster: NEQ052; n=1; Nanoarchaeum equitans|Rep:
NEQ052 - Nanoarchaeum equitans
Length = 358
Score = 37.1 bits (82), Expect = 0.36
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 50 KIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVDDT 229
KII +VD Y G +A+ A + L+ ++ +E+K++ F I+ G ++
Sbjct: 237 KIIAIVDTGYSDAYGLREALYRAEDKLKELEIEKERKILSDLFKAIALGRKDIALGYEEV 296
Query: 230 LRALELGSARR 262
+ LE G ++
Sbjct: 297 KKYLEQGLVQK 307
>UniRef50_Q315P5 Cluster: Diguanylate cyclase/phosphodiesterase
(GGDEF & EAL domains) with PAS/PAC sensor; n=1;
Desulfovibrio desulfuricans G20|Rep: Diguanylate
cyclase/phosphodiesterase (GGDEF & EAL domains) with
PAS/PAC sensor - Desulfovibrio desulfuricans (strain
G20)
Length = 595
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 192 RTQESIASVSMIHCALSNSDPRDVDLLGEPRHTKIRIEVACHQPGNNSPPDA*TREGQIT 371
R +E +A V I L +S VD G H + + VA H+PG N+P D G
Sbjct: 252 RAEEVLARVQQIQQRLMDS----VDTGGRRLHLTVSVGVATHRPGQNAPEDMMRNGGIAL 307
Query: 372 FHRQR 386
H +R
Sbjct: 308 QHAKR 312
>UniRef50_A6A4M8 Cluster: Glycosyl transferase, group 1; n=2; Vibrio
cholerae|Rep: Glycosyl transferase, group 1 - Vibrio
cholerae MZO-2
Length = 635
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 247 RIRETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVEL 402
RI+E L EN+D+ LK H N H +PE+ F D+ SG ++
Sbjct: 36 RIKEILQLCENVDVYSKELKEHCINWPQTYHFSPERSNILRPFGDQISGKDV 87
>UniRef50_Q0QZI1 Cluster: Gp47; n=1; Phage Syn9|Rep: Gp47 - Phage
Syn9
Length = 184
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +1
Query: 271 WENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPL 426
W N Q VLKSH+ + ++T K + FTD E+G E+ VE +PL
Sbjct: 86 WINFHTQDDVLKSHSHDYPIHGYITLTNHKTDTVFTDGENGKEVWRVENKPL 137
>UniRef50_Q4Q2C5 Cluster: Dynein heavy chain, putative; n=8;
Trypanosomatidae|Rep: Dynein heavy chain, putative -
Leishmania major
Length = 4241
Score = 34.3 bits (75), Expect = 2.6
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 328 TILHLTPEQEKDKSHFTDKESGVELELVECQP-LLEWLANNYKSF--GATLESSRTRARG 498
TI H P+ EK+K +KE G++++L E + LL+ LAN+ S TL S + +
Sbjct: 3347 TIQHEQPQLEKEKLDMLEKEEGLKMQLAELEERLLKNLANSEGSLLEDTTLIESLNQIKS 3406
Query: 499 K-QFVAASRDGGSSVQSDFHR 558
+ + + + VQ D R
Sbjct: 3407 QASDITTALEQSKVVQEDLDR 3427
>UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;
n=9; Thermoprotei|Rep: Peptide chain release factor
subunit 1 - Aeropyrum pernix
Length = 373
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +2
Query: 17 QSDMFDPRLQAKII--KLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEIS 190
+ + D RL+ KI+ +LVDV+Y G G +A+ A + ++ + + + ++
Sbjct: 236 EGNYLDYRLK-KILAPELVDVAYQGLQGLKEAVMKAEKVVEAQMYRDAVNAMEEFKLHLA 294
Query: 191 QDTGKYCFGVDDTLRALELGSAR 259
+ TG +G D ALE+G+ +
Sbjct: 295 KGTGMIVYGEKDVEAALEMGAVK 317
>UniRef50_UPI00015B42E6 Cluster: PREDICTED: similar to LD13710p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD13710p - Nasonia vitripennis
Length = 629
Score = 33.9 bits (74), Expect = 3.4
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 364 KSHFTDKESGVELELVECQPLLEWLANNYKSFGATLESSRTRARGKQFVAASRDGGSSVQ 543
K HF ++ E+E+ E + E L N G +E R +RG+Q A G S++
Sbjct: 224 KLHFRLQQIKTEMEVYENPAMREMLVRNQSFTGNEVEIKRRESRGRQLEAHFVWLGGSLE 283
Query: 544 SDFHRCSSRQEI--DNLTTSTLYC 609
S Q+ N T T C
Sbjct: 284 ETIEALKSTQDFLPSNTFTKTSNC 307
>UniRef50_A4G8Z9 Cluster: Putative uncharacterized protein; n=1;
Herminiimonas arsenicoxydans|Rep: Putative
uncharacterized protein - Herminiimonas arsenicoxydans
Length = 251
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 386 RAEWSWSLWSASRCWSGWPITTSRLVPP*S-HHGQEPEGSSSSRLRGMAVPPYKVTSIDA 562
+A++ LWS + +S I+T PP +G E + SSR+ +PP +VT+ D
Sbjct: 168 KADYDRLLWSWIKGYSDTAISTQADWPPLYIGYGTEDRFAGSSRIIEKVLPPGRVTTTDG 227
Query: 563 AHD 571
H+
Sbjct: 228 GHE 230
>UniRef50_Q479I8 Cluster: Cation efflux protein; n=1; Dechloromonas
aromatica RCB|Rep: Cation efflux protein - Dechloromonas
aromatica (strain RCB)
Length = 389
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 298 VLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEWL 438
VL+ H + ++H+ PE + D + F+ + G E L E +PLL L
Sbjct: 282 VLREHPEVLDVLVHIDPEDDMDPAVFSARLPGREALLAELKPLLAGL 328
>UniRef50_UPI0000E4615C Cluster: PREDICTED: similar to TamA; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
TamA - Strongylocentrotus purpuratus
Length = 1526
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -2
Query: 273 PADQRLADPSSRARSVSSTPKQYFP 199
PA+ R A+P+SR R V++TPKQ P
Sbjct: 1031 PAETRPAEPASRPRRVAATPKQQTP 1055
>UniRef50_Q3E9C2 Cluster: Uncharacterized protein At5g19310.1; n=7;
Magnoliophyta|Rep: Uncharacterized protein At5g19310.1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1064
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +1
Query: 307 SHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEWLANNYKSFGATLESSRT 486
S+ + E +L + E+++++ +ESG E E +PL W N K + +S
Sbjct: 991 SNGSKAEAVLSESDEEKEEEEEERKEESGKESEEENEKPLHSWKTNKKKRSRYPVMTSSP 1050
Query: 487 RARGK 501
+RGK
Sbjct: 1051 NSRGK 1055
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,907,904
Number of Sequences: 1657284
Number of extensions: 13929174
Number of successful extensions: 42910
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 41346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42897
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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