Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060475.seq
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   4.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   4.7  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   8.3  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   8.3  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   8.3  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   8.3  

>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 391 RSLCR*NVICPSLVQASGGELFPGWWHATSIRI 293
           R+L +   +C  + +   GE++ G WH  S+ +
Sbjct: 145 RTLAKQVSLCECIGRGRYGEVWRGIWHGESVAV 177


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 7/18 (38%), Positives = 16/18 (88%)
 Frame = -3

Query: 281 RFSQQINVSRIRVRERAV 228
           RF+ Q+++S++ +R+RA+
Sbjct: 133 RFAHQLDLSKLYIRQRAI 150


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 424 LLEWLANNYKSFGATLESSRTRARGKQFV 510
           LLE +A  Y+ F A LES +   R  + V
Sbjct: 95  LLETVAKAYEPFKAALESEQDAHRSLRLV 123


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 180 MRSHRTQESIASVSMIHCA 236
           ++ HR QE +  +S++ CA
Sbjct: 213 VKQHRVQEVLQELSLVKCA 231


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 180 MRSHRTQESIASVSMIHCA 236
           ++ HR QE +  +S++ CA
Sbjct: 213 VKQHRVQEVLQELSLVKCA 231


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 180 MRSHRTQESIASVSMIHCA 236
           ++ HR QE +  +S++ CA
Sbjct: 191 VKQHRVQEVLQELSLVKCA 209


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 249 PSSRARSVSSTPKQYFPV 196
           P++    V + PK+Y+PV
Sbjct: 342 PTNAGHKVMNAPKEYYPV 359


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 249 PSSRARSVSSTPKQYFPV 196
           P++    V + PK+Y+PV
Sbjct: 350 PTNAGHKVMNAPKEYYPV 367


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,968
Number of Sequences: 2352
Number of extensions: 15051
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)