Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060475.seq
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 152 9e-37
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 152 9e-37
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 152 9e-37
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 152 9e-37
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 152 9e-37
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 152 9e-37
M75715-1|AAA36665.1| 428|Homo sapiens TB3-1 protein. 117 4e-26
BC108699-1|AAI08700.1| 455|Homo sapiens 5'-nucleotidase domain ... 30 6.1
BC105041-1|AAI05042.1| 347|Homo sapiens G protein-coupled recep... 30 6.1
BC105013-1|AAI05014.1| 347|Homo sapiens G protein-coupled recep... 30 6.1
BC029224-1|AAH29224.1| 242|Homo sapiens CCDC42 protein protein. 30 6.1
AY569570-1|AAS76892.1| 347|Homo sapiens G protein-coupled recep... 30 6.1
AY255532-1|AAO85044.1| 217|Homo sapiens G protein-coupled recep... 30 6.1
AL121963-7|CAI19534.1| 455|Homo sapiens protein ( s (hypothetic... 30 6.1
AL050331-1|CAI21537.1| 455|Homo sapiens protein ( Human DNA seq... 30 6.1
AK057296-1|BAB71414.1| 316|Homo sapiens protein ( Homo sapiens ... 30 6.1
AB083589-1|BAB89302.1| 347|Homo sapiens putative G-protein coup... 30 6.1
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 152 bits (369), Expect = 9e-37
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TRLSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDE 184
T LSQSDMFD RLQ+K++KLVD+SYGGENGFNQAIEL+ E L NVKFIQEKKLIGRYFDE
Sbjct: 234 TELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDE 293
Query: 185 ISQDTGKYCFGVDDTLRALELGS 253
ISQDTGKYCFGV+DTL+ALE+G+
Sbjct: 294 ISQDTGKYCFGVEDTLKALEMGA 316
Score = 118 bits (283), Expect = 2e-26
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
E LI +ENLDI RYVL T +E IL+LTPEQEKDKSHFTDKE+G E EL+E PLLEW
Sbjct: 318 EILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEW 377
Query: 436 LANNYKSFGATLESSRTRAR-GKQFV 510
ANNYK FGATLE +++ G QFV
Sbjct: 378 FANNYKKFGATLEIVTDKSQEGSQFV 403
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 152 bits (369), Expect = 9e-37
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TRLSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDE 184
T LSQSDMFD RLQ+K++KLVD+SYGGENGFNQAIEL+ E L NVKFIQEKKLIGRYFDE
Sbjct: 234 TELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDE 293
Query: 185 ISQDTGKYCFGVDDTLRALELGS 253
ISQDTGKYCFGV+DTL+ALE+G+
Sbjct: 294 ISQDTGKYCFGVEDTLKALEMGA 316
Score = 118 bits (283), Expect = 2e-26
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
E LI +ENLDI RYVL T +E IL+LTPEQEKDKSHFTDKE+G E EL+E PLLEW
Sbjct: 318 EILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEW 377
Query: 436 LANNYKSFGATLESSRTRAR-GKQFV 510
ANNYK FGATLE +++ G QFV
Sbjct: 378 FANNYKKFGATLEIVTDKSQEGSQFV 403
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 152 bits (369), Expect = 9e-37
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TRLSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDE 184
T LSQSDMFD RLQ+K++KLVD+SYGGENGFNQAIEL+ E L NVKFIQEKKLIGRYFDE
Sbjct: 201 TELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDE 260
Query: 185 ISQDTGKYCFGVDDTLRALELGS 253
ISQDTGKYCFGV+DTL+ALE+G+
Sbjct: 261 ISQDTGKYCFGVEDTLKALEMGA 283
Score = 118 bits (283), Expect = 2e-26
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
E LI +ENLDI RYVL T +E IL+LTPEQEKDKSHFTDKE+G E EL+E PLLEW
Sbjct: 285 EILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEW 344
Query: 436 LANNYKSFGATLESSRTRAR-GKQFV 510
ANNYK FGATLE +++ G QFV
Sbjct: 345 FANNYKKFGATLEIVTDKSQEGSQFV 370
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 152 bits (369), Expect = 9e-37
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TRLSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDE 184
T LSQSDMFD RLQ+K++KLVD+SYGGENGFNQAIEL+ E L NVKFIQEKKLIGRYFDE
Sbjct: 234 TELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDE 293
Query: 185 ISQDTGKYCFGVDDTLRALELGS 253
ISQDTGKYCFGV+DTL+ALE+G+
Sbjct: 294 ISQDTGKYCFGVEDTLKALEMGA 316
Score = 118 bits (283), Expect = 2e-26
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
E LI +ENLDI RYVL T +E IL+LTPEQEKDKSHFTDKE+G E EL+E PLLEW
Sbjct: 318 EILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEW 377
Query: 436 LANNYKSFGATLESSRTRAR-GKQFV 510
ANNYK FGATLE +++ G QFV
Sbjct: 378 FANNYKKFGATLEIVTDKSQEGSQFV 403
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 152 bits (369), Expect = 9e-37
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TRLSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDE 184
T LSQSDMFD RLQ+K++KLVD+SYGGENGFNQAIEL+ E L NVKFIQEKKLIGRYFDE
Sbjct: 201 TELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDE 260
Query: 185 ISQDTGKYCFGVDDTLRALELGS 253
ISQDTGKYCFGV+DTL+ALE+G+
Sbjct: 261 ISQDTGKYCFGVEDTLKALEMGA 283
Score = 118 bits (283), Expect = 2e-26
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
E LI +ENLDI RYVL T +E IL+LTPEQEKDKSHFTDKE+G E EL+E PLLEW
Sbjct: 285 EILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEW 344
Query: 436 LANNYKSFGATLESSRTRAR-GKQFV 510
ANNYK FGATLE +++ G QFV
Sbjct: 345 FANNYKKFGATLEIVTDKSQEGSQFV 370
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 152 bits (369), Expect = 9e-37
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TRLSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDE 184
T LSQSDMFD RLQ+K++KLVD+SYGGENGFNQAIEL+ E L NVKFIQEKKLIGRYFDE
Sbjct: 234 TELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDE 293
Query: 185 ISQDTGKYCFGVDDTLRALELGS 253
ISQDTGKYCFGV+DTL+ALE+G+
Sbjct: 294 ISQDTGKYCFGVEDTLKALEMGA 316
Score = 118 bits (283), Expect = 2e-26
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKESGVELELVECQPLLEW 435
E LI +ENLDI RYVL T +E IL+LTPEQEKDKSHFTDKE+G E EL+E PLLEW
Sbjct: 318 EILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEW 377
Query: 436 LANNYKSFGATLESSRTRAR-GKQFV 510
ANNYK FGATLE +++ G QFV
Sbjct: 378 FANNYKKFGATLEIVTDKSQEGSQFV 403
>M75715-1|AAA36665.1| 428|Homo sapiens TB3-1 protein.
Length = 428
Score = 117 bits (281), Expect = 4e-26
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = +2
Query: 5 TRLSQSDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDE 184
T LSQSDMFD RLQ+K++KLVD+SYGGENGFNQAIEL+ E L NVKFIQEKKLIGRYFDE
Sbjct: 234 TELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDE 293
Query: 185 ISQDT 199
ISQD+
Sbjct: 294 ISQDS 298
Score = 74.5 bits (175), Expect = 3e-13
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 334 LHLTPEQEKDKSHFTDKESGVELELVECQPLLEWLANNYKS 456
L+LTPEQEKDKSHFTDKE+G E EL+E PLLEW ANNYK+
Sbjct: 343 LYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKN 383
>BC108699-1|AAI08700.1| 455|Homo sapiens 5'-nucleotidase domain
containing 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 41 LQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGV 220
L A+++ + G+ F+ ++ A N K K+ G YF EI +D G+Y
Sbjct: 138 LCARVVDYLTKLNNGQKTFDFWKDIVAAIQHNYKMSAFKENCGIYFPEIKRDPGRYLHSC 197
Query: 221 DDTLR 235
++++
Sbjct: 198 PESVK 202
>BC105041-1|AAI05042.1| 347|Homo sapiens G protein-coupled receptor
148 protein.
Length = 347
Score = 30.3 bits (65), Expect = 6.1
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 365 LSFSCSGVRWRIVS--WLVACDFNTYL 291
LSF G W+ V+ WLVAC F T+L
Sbjct: 157 LSFMSHGAAWKAVALIWLVACCFPTFL 183
>BC105013-1|AAI05014.1| 347|Homo sapiens G protein-coupled receptor
148 protein.
Length = 347
Score = 30.3 bits (65), Expect = 6.1
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 365 LSFSCSGVRWRIVS--WLVACDFNTYL 291
LSF G W+ V+ WLVAC F T+L
Sbjct: 157 LSFMSHGAAWKAVALIWLVACCFPTFL 183
>BC029224-1|AAH29224.1| 242|Homo sapiens CCDC42 protein protein.
Length = 242
Score = 30.3 bits (65), Expect = 6.1
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 247 RIRETL-ICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHF-TDKESGVELELVECQ 420
R ETL + WE L ++ LK+H E + QE D+ K++ E EL +CQ
Sbjct: 67 RRMETLNLRWEELGVKEAQLKAHIQKSEQFI-----QENDQKRIRAMKKANKEREL-KCQ 120
Query: 421 PLLEWLANNYKSFGATLESSRTRARGKQF 507
+ E + LE R A+ K +
Sbjct: 121 HMQELTKRKQEMVALRLEHQRLSAKLKDY 149
>AY569570-1|AAS76892.1| 347|Homo sapiens G protein-coupled receptor
148 protein.
Length = 347
Score = 30.3 bits (65), Expect = 6.1
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 365 LSFSCSGVRWRIVS--WLVACDFNTYL 291
LSF G W+ V+ WLVAC F T+L
Sbjct: 157 LSFMSHGAAWKAVALIWLVACCFPTFL 183
>AY255532-1|AAO85044.1| 217|Homo sapiens G protein-coupled receptor
PGR6 protein.
Length = 217
Score = 30.3 bits (65), Expect = 6.1
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 365 LSFSCSGVRWRIVS--WLVACDFNTYL 291
LSF G W+ V+ WLVAC F T+L
Sbjct: 95 LSFMSHGAAWKAVALIWLVACCFPTFL 121
>AL121963-7|CAI19534.1| 455|Homo sapiens protein ( s (hypothetical)
genes, the ).).
Length = 455
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 41 LQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGV 220
L A+++ + G+ F+ ++ A N K K+ G YF EI +D G+Y
Sbjct: 138 LCARVVDYLTKLNNGQKTFDFWKDIVAAIQHNYKMSAFKENCGIYFPEIKRDPGRYLHSC 197
Query: 221 DDTLR 235
++++
Sbjct: 198 PESVK 202
>AL050331-1|CAI21537.1| 455|Homo sapiens protein ( Human DNA
sequence from clone RP3-486I3 on chromosome 6q22.1-22.3
Contains the 3' end of a novel gene, a novel gene, the
gene for ).
Length = 455
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 41 LQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGV 220
L A+++ + G+ F+ ++ A N K K+ G YF EI +D G+Y
Sbjct: 138 LCARVVDYLTKLNNGQKTFDFWKDIVAAIQHNYKMSAFKENCGIYFPEIKRDPGRYLHSC 197
Query: 221 DDTLR 235
++++
Sbjct: 198 PESVK 202
>AK057296-1|BAB71414.1| 316|Homo sapiens protein ( Homo sapiens
cDNA FLJ32734 fis, clone TESTI2001180, weakly similar to
TRICHOHYALIN. ).
Length = 316
Score = 30.3 bits (65), Expect = 6.1
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 247 RIRETL-ICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHF-TDKESGVELELVECQ 420
R ETL + WE L ++ LK+H E + QE D+ K++ E EL +CQ
Sbjct: 67 RRMETLNLRWEELGVKEAQLKAHIQKSEQFI-----QENDQKRIRAMKKANKEREL-KCQ 120
Query: 421 PLLEWLANNYKSFGATLESSRTRARGKQF 507
+ E + LE R A+ K +
Sbjct: 121 HMQELTKRKQEMVALRLEHQRLSAKLKDY 149
>AB083589-1|BAB89302.1| 347|Homo sapiens putative G-protein coupled
receptor protein.
Length = 347
Score = 30.3 bits (65), Expect = 6.1
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 365 LSFSCSGVRWRIVS--WLVACDFNTYL 291
LSF G W+ V+ WLVAC F T+L
Sbjct: 157 LSFMSHGAAWKAVALIWLVACCFPTFL 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,351,370
Number of Sequences: 237096
Number of extensions: 2193920
Number of successful extensions: 11146
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11139
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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