Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060474.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   0.97 
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       24   5.2  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.8  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 320  GGKIMLGLIVGQVPVMLQSEDWXXRHAALMAVSSAGEGCHKQMEQ 454
            G K   G  V     ++QSE +  RH   + +S AG+ C +QM+Q
Sbjct: 1489 GEKCQGGSHVSMKGKLIQSEPY--RH--FLRISEAGQSCKEQMDQ 1529


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 239 TGQHCYDDNDQNYVAAESA 295
           T   CYDD+D+   AA +A
Sbjct: 165 TSNPCYDDDDEEDAAAAAA 183


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = -3

Query: 165  WALVYAPWLVLSHIMLPSLQVPVG----ASYLQHLCPQPPLCKLGIW 37
            WA     W +L++   P   VP         + H  PQP +C L ++
Sbjct: 1020 WAFGITIWELLTYGARPYENVPAKDVPELIEIGHKLPQPDICSLDVY 1066


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,297
Number of Sequences: 2352
Number of extensions: 17291
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)