Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060474.seq
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro... 102 4e-22
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ... 102 4e-22
AY069769-1|AAL39914.1| 1928|Drosophila melanogaster SD01229p pro... 31 1.1
AF247562-1|AAF70256.1| 2302|Drosophila melanogaster Scribbler lo... 31 1.1
AF242194-1|AAF76322.1| 2302|Drosophila melanogaster brakeless-B ... 31 1.1
AB044403-1|BAB20792.1| 2310|Drosophila melanogaster master of th... 31 1.1
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB... 30 3.4
AL023874-1|CAA19646.1| 819|Drosophila melanogaster EG:100G10.7 ... 29 4.5
AE014298-442|AAF45806.1| 819|Drosophila melanogaster CG2658-PA,... 29 4.5
>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
protein.
Length = 1000
Score = 102 bits (245), Expect = 4e-22
Identities = 46/76 (60%), Positives = 59/76 (77%)
Frame = +2
Query: 257 DDNDQNYVAAESALDRMCCGLGGKIMLGLIVGQVPVMLQSEDWXXRHAALMAVSSAGEGC 436
DD+ N V AES+LDR+ CGLGGKI+L L++ +PVML DW R AALMA+S+ GEGC
Sbjct: 331 DDHSDNNVIAESSLDRLACGLGGKIVLPLVMNALPVMLGHADWKHRFAALMAISAIGEGC 390
Query: 437 HKQMEQMLDQVVTAVL 484
HKQME +LD+V++ VL
Sbjct: 391 HKQMEAILDEVMSGVL 406
Score = 95.9 bits (228), Expect = 5e-20
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +3
Query: 12 KFLRPQLETIFQVCIKVVGDKDAEDNWRQLALEAMVTLCETAPAMVRKQVPNAVSMLTPL 191
KFLRPQLE IF+VC+KV +D ED+WR L LE MV+L E AP+M+RK+ + L PL
Sbjct: 249 KFLRPQLEFIFEVCMKVFSSQDFEDSWRHLVLEVMVSLAENAPSMIRKRADKYIVALIPL 308
Query: 192 VLEMMCELDEEPDWTIQD 245
+L MM +LD++ +W+ D
Sbjct: 309 ILHMMTDLDDDENWSTAD 326
>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
protein.
Length = 1105
Score = 102 bits (245), Expect = 4e-22
Identities = 46/76 (60%), Positives = 59/76 (77%)
Frame = +2
Query: 257 DDNDQNYVAAESALDRMCCGLGGKIMLGLIVGQVPVMLQSEDWXXRHAALMAVSSAGEGC 436
DD+ N V AES+LDR+ CGLGGKI+L L++ +PVML DW R AALMA+S+ GEGC
Sbjct: 331 DDHSDNNVIAESSLDRLACGLGGKIVLPLVMNALPVMLGHADWKHRFAALMAISAIGEGC 390
Query: 437 HKQMEQMLDQVVTAVL 484
HKQME +LD+V++ VL
Sbjct: 391 HKQMEAILDEVMSGVL 406
Score = 95.9 bits (228), Expect = 5e-20
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +3
Query: 12 KFLRPQLETIFQVCIKVVGDKDAEDNWRQLALEAMVTLCETAPAMVRKQVPNAVSMLTPL 191
KFLRPQLE IF+VC+KV +D ED+WR L LE MV+L E AP+M+RK+ + L PL
Sbjct: 249 KFLRPQLEFIFEVCMKVFSSQDFEDSWRHLVLEVMVSLAENAPSMIRKRADKYIVALIPL 308
Query: 192 VLEMMCELDEEPDWTIQD 245
+L MM +LD++ +W+ D
Sbjct: 309 ILHMMTDLDDDENWSTAD 326
>AY069769-1|AAL39914.1| 1928|Drosophila melanogaster SD01229p
protein.
Length = 1928
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 402 AAWRXXQSSDCNITGTCPTISPSIILPPRPQHMRSNADS 286
AA SS N G P+ SP+ LPPRP+ +S ++
Sbjct: 624 AAANSNSSSSGNGGGATPSTSPTAFLPPRPEKRKSKDEA 662
>AF247562-1|AAF70256.1| 2302|Drosophila melanogaster Scribbler long
isoform protein.
Length = 2302
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 402 AAWRXXQSSDCNITGTCPTISPSIILPPRPQHMRSNADS 286
AA SS N G P+ SP+ LPPRP+ +S ++
Sbjct: 998 AAANSNSSSSGNGGGATPSTSPTAFLPPRPEKRKSKDEA 1036
>AF242194-1|AAF76322.1| 2302|Drosophila melanogaster brakeless-B
protein.
Length = 2302
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 402 AAWRXXQSSDCNITGTCPTISPSIILPPRPQHMRSNADS 286
AA SS N G P+ SP+ LPPRP+ +S ++
Sbjct: 998 AAANSNSSSSGNGGGATPSTSPTAFLPPRPEKRKSKDEA 1036
>AB044403-1|BAB20792.1| 2310|Drosophila melanogaster master of thick
veins protein.
Length = 2310
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 402 AAWRXXQSSDCNITGTCPTISPSIILPPRPQHMRSNADS 286
AA SS N G P+ SP+ LPPRP+ +S ++
Sbjct: 1008 AAANSNSSSSGNGGGATPSTSPTAFLPPRPEKRKSKDEA 1046
>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
protein.
Length = 5146
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 24 PQLETIFQVCIKVVGDKDAEDNWRQLALEAMVTLCETAPA 143
P+LE ++Q+CI V D + QL + M+ LC TA A
Sbjct: 188 PKLEFLYQLCIDYV---DEHGHAAQLEIPDMMDLCHTASA 224
>AL023874-1|CAA19646.1| 819|Drosophila melanogaster EG:100G10.7
protein.
Length = 819
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 254 YDDNDQNYVAAESALDRMCCGLGGKIMLGLIVGQVPVMLQSE 379
Y ++Q+ + E D+MC LGG+ L+ ++ Q++
Sbjct: 643 YTPSEQHLYSKEELFDKMCMALGGRAAENLVFNRITTGAQND 684
>AE014298-442|AAF45806.1| 819|Drosophila melanogaster CG2658-PA,
isoform A protein.
Length = 819
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 254 YDDNDQNYVAAESALDRMCCGLGGKIMLGLIVGQVPVMLQSE 379
Y ++Q+ + E D+MC LGG+ L+ ++ Q++
Sbjct: 643 YTPSEQHLYSKEELFDKMCMALGGRAAENLVFNRITTGAQND 684
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,026,326
Number of Sequences: 53049
Number of extensions: 743051
Number of successful extensions: 2186
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2183
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -