Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060472.seq
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.1  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 137 LPAREGGDHRQRPGQQDH 190
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 496 ECSYPVPAYFN 528
           EC YP+P + N
Sbjct: 303 ECEYPIPDHMN 313


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 365 DGGKPKXKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 490
           D  KPK +   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 136 TPTQEYVVPRSIPT 95
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 535 QRQATKDAGTSXA*TFSNL 591
           +RQ TKD  TS   + SNL
Sbjct: 159 ERQRTKDRDTSEVESTSNL 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,761
Number of Sequences: 336
Number of extensions: 3324
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)