Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060472.seq
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 137 1e-33
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 129 4e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 115 6e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 107 1e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 79 7e-16
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 49 6e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 40 4e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 29 0.53
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.70
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 26 3.7
SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|c... 26 3.7
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 5.0
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 26 5.0
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 6.5
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 8.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 8.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 137 bits (332), Expect = 1e-33
Identities = 63/88 (71%), Positives = 73/88 (82%)
Frame = +2
Query: 254 AMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKXKVAYKGEDKTFFPEEV 433
AMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP +V YKGE KTF PEE+
Sbjct: 58 AMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEI 117
Query: 434 SSMVLTKMKETAEAYLGKTVQNAVIRFP 517
SSMVL KM+ETAEAYLG V +AV+ P
Sbjct: 118 SSMVLMKMRETAEAYLGGKVTDAVVTVP 145
Score = 104 bits (249), Expect = 1e-23
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +3
Query: 93 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVR*TP 266
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 511 VPAYFNDSQRQATKDAG 561
VPAYFNDSQRQATKDAG
Sbjct: 144 VPAYFNDSQRQATKDAG 160
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 129 bits (311), Expect = 4e-31
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = +2
Query: 254 AMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKXKVAYKGEDKTFFPEEV 433
AMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP +V +KGE KTF PEE+
Sbjct: 58 AMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEI 117
Query: 434 SSMVLTKMKETAEAYLGKTVQNAVIRFP 517
SSMVL KM+E+AEA+LG V +AV+ P
Sbjct: 118 SSMVLLKMRESAEAFLGGKVTDAVVTVP 145
Score = 104 bits (249), Expect = 1e-23
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +3
Query: 93 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVR*TP 266
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 511 VPAYFNDSQRQATKDAG 561
VPAYFNDSQRQATKDAG
Sbjct: 144 VPAYFNDSQRQATKDAG 160
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 115 bits (276), Expect = 6e-27
Identities = 52/88 (59%), Positives = 65/88 (73%)
Frame = +2
Query: 254 AMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKXKVAYKGEDKTFFPEEV 433
AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P +V Y GE K F +E+
Sbjct: 62 AMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEI 121
Query: 434 SSMVLTKMKETAEAYLGKTVQNAVIRFP 517
S+MVLTKMKE +EA L K V+ AVI P
Sbjct: 122 SAMVLTKMKEISEAKLNKRVEKAVITVP 149
Score = 92.3 bits (219), Expect = 5e-20
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +3
Query: 93 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVR*TP 266
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 35.5 bits (78), Expect = 0.006
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 511 VPAYFNDSQRQATKDAG 561
VPAYF+DSQR ATKDAG
Sbjct: 148 VPAYFSDSQRAATKDAG 164
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 107 bits (257), Expect = 1e-24
Identities = 48/86 (55%), Positives = 65/86 (75%)
Frame = +2
Query: 260 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKXKVAYKGEDKTFFPEEVSS 439
NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P +V G+ K F PEE+S+
Sbjct: 93 NPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISA 152
Query: 440 MVLTKMKETAEAYLGKTVQNAVIRFP 517
M+L+KMK+TAEAYLGK V +AV+ P
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTVP 178
Score = 94.3 bits (224), Expect = 1e-20
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +3
Query: 96 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVR*TP 266
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ P
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 511 VPAYFNDSQRQATKDAGT 564
VPAYFND+QRQATKDAGT
Sbjct: 177 VPAYFNDAQRQATKDAGT 194
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 78.6 bits (185), Expect = 7e-16
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = +2
Query: 257 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKXKVAYKGEDKTFFPEEVS 436
+NP NT F KRLIGR+F++ VQ D+K P+++V A KT+ P ++
Sbjct: 108 INPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWLEA---RGKTYSPSQIG 164
Query: 437 SMVLTKMKETAEAYLGKTVQNAVIRFP 517
+L+KM+ETA YLGK V+NAV+ P
Sbjct: 165 GFILSKMRETASTYLGKDVKNAVVTVP 191
Score = 67.7 bits (158), Expect = 1e-12
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 84 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVR* 260
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 261 TPTTQY 278
P +
Sbjct: 109 NPENTF 114
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 511 VPAYFNDSQRQATKDAG 561
VPAYFNDSQRQATK AG
Sbjct: 190 VPAYFNDSQRQATKAAG 206
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 48.8 bits (111), Expect = 6e-07
Identities = 19/56 (33%), Positives = 37/56 (66%)
Frame = +3
Query: 81 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 248
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKS 58
Score = 40.3 bits (90), Expect = 2e-04
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 254 AMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKXKVAYKGEDKTFFPEE 430
A N NT+ KRL GR ++D ++ + ++ G KV Y E+ F +
Sbjct: 61 ASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQ 120
Query: 431 VSSMVLTKMKETAEAYLGKTVQNAVIRFP 517
+ + TK+K AEA L +V + VI P
Sbjct: 121 LIAAYFTKIKAIAEAELIGSVSDVVISIP 149
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 96 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 254
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQL 79
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 499 CSYPVPAYFNDSQRQATKDA 558
C VP YF D+QR+A + A
Sbjct: 166 CVMSVPVYFTDAQRKALESA 185
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.1 bits (62), Expect = 0.53
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 96 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 248
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASN 76
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.70
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 88 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 183
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 403 TLICYLXLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 281
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 26.2 bits (55), Expect = 3.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 406 RQNLFPRGSQFHGAYENEGNCRS--LSRQNCAECSYPVPA-YFNDSQRQATKDAGTS 567
R+NLF + + +G E+E +CRS L R + + YP+ S Q KD T+
Sbjct: 51 RENLFFKEMRTNGKNEHETSCRSVVLYRNSKSAKRYPLSTKCARISYMQGNKDTKTA 107
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 174 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 16
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 266 WGSSHLVLGGISDETLGVCERNIRRSGPVALVVGD-DLHLPVLEDTNARVR 117
WGS +G + TLG+ + + + L+VGD LHL V ++ +A +R
Sbjct: 418 WGSIGWSVGAMFGATLGIKDSDAPHRRSI-LIVGDGSLHLTV-QEISATIR 466
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Frame = +2
Query: 395 YKGEDKTFFPEEVSSMVLT--KMKETAEAYLGKTV----QNAVIRFP-----RTSMTLKD 541
Y +K+ FP SS M+ A AY+ ++ Q +P ++SM++KD
Sbjct: 417 YPSLNKSIFPASYSSSAEDGQNMQAPAHAYMQSSIYGVNQEQKSEYPSNLSMQSSMSIKD 476
Query: 542 KPQKMQVHLXLERSR 586
Q ++HL + S+
Sbjct: 477 PSQLQRIHLYPQHSQ 491
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -2
Query: 351 KGQCFMSACTVASSNLRPMRRLASNIVLLGFIAPGSWRHL 232
+ + ++S V +RP + + +IV+ +A GS++H+
Sbjct: 1177 QAEAYLSKMQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHI 1216
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 74 QNGKSTRSRNRSGYHVLLRWCLPARE 151
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,620,732
Number of Sequences: 5004
Number of extensions: 55345
Number of successful extensions: 175
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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