Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060472.seq
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    40   6e-05
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   3.3  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 39.9 bits (89), Expect = 6e-05
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +1

Query: 511 VPAYFNDSQRQATKDAG 561
           VPAYFNDSQRQATKDAG
Sbjct: 6   VPAYFNDSQRQATKDAG 22


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 77   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 178
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +1

Query: 175 RATGPLRLMLRSQTPSVSSEMPPRTRCDEPQQHNIRC 285
           +  G L  +  S + +VSS++PP    +  +  ++ C
Sbjct: 744 KVAGTLGAVQPSSSEAVSSKLPPTAEPEHSESSDVEC 780


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,290
Number of Sequences: 2352
Number of extensions: 15019
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)