Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060471.seq
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001025-1|AAH01025.1|  373|Homo sapiens RNA terminal phosphate ...    94   4e-19
AL353151-4|CAH72285.1|  373|Homo sapiens RNA terminal phosphate ...    94   4e-19
AL158147-4|CAH70320.1|  373|Homo sapiens RNA terminal phosphate ...    94   4e-19
AK022904-1|BAB14300.1|  373|Homo sapiens protein ( Homo sapiens ...    94   4e-19
AJ276894-1|CAB89811.1|  373|Homo sapiens RNA 3'-terminal phospha...    94   4e-19
AL353151-5|CAH72286.1|  175|Homo sapiens RNA terminal phosphate ...    92   2e-18
AF389880-1|AAL93215.1| 3036|Homo sapiens rabconnectin protein.         30   6.6  
AB020663-1|BAA74879.2| 2237|Homo sapiens KIAA0856 protein protein.     30   6.6  

>BC001025-1|AAH01025.1|  373|Homo sapiens RNA terminal phosphate
           cyclase-like 1 protein.
          Length = 373

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +2

Query: 257 VELSETGTSVYYQPGILIGGQVNHNCCTQRGIGYYLEVLLALGPFCKEPLNAVLQGVTHS 436
           +E+++TGT++YYQPG+L GG V H+C   RGIGYYLE LL L PF K PL  VL+GVT+ 
Sbjct: 64  IEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTND 123

Query: 437 DLDVSVD 457
            +D SVD
Sbjct: 124 QVDPSVD 130



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 90  IKYKGSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTNGT 254
           + Y G N+ RQRL+LSTLSGR +KI  IR+ +D+PGLR++E S IRLLDK+TNG+
Sbjct: 8   LSYAGCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGS 62


>AL353151-4|CAH72285.1|  373|Homo sapiens RNA terminal phosphate
           cyclase-like 1 protein.
          Length = 373

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +2

Query: 257 VELSETGTSVYYQPGILIGGQVNHNCCTQRGIGYYLEVLLALGPFCKEPLNAVLQGVTHS 436
           +E+++TGT++YYQPG+L GG V H+C   RGIGYYLE LL L PF K PL  VL+GVT+ 
Sbjct: 64  IEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTND 123

Query: 437 DLDVSVD 457
            +D SVD
Sbjct: 124 QVDPSVD 130



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 90  IKYKGSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTNGT 254
           + Y G N+ RQRL+LSTLSGR +KI  IR+ +D+PGLR++E S IRLLDK+TNG+
Sbjct: 8   LSYAGCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGS 62


>AL158147-4|CAH70320.1|  373|Homo sapiens RNA terminal phosphate
           cyclase-like 1 protein.
          Length = 373

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +2

Query: 257 VELSETGTSVYYQPGILIGGQVNHNCCTQRGIGYYLEVLLALGPFCKEPLNAVLQGVTHS 436
           +E+++TGT++YYQPG+L GG V H+C   RGIGYYLE LL L PF K PL  VL+GVT+ 
Sbjct: 64  IEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTND 123

Query: 437 DLDVSVD 457
            +D SVD
Sbjct: 124 QVDPSVD 130



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 90  IKYKGSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTNGT 254
           + Y G N+ RQRL+LSTLSGR +KI  IR+ +D+PGLR++E S IRLLDK+TNG+
Sbjct: 8   LSYAGCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGS 62


>AK022904-1|BAB14300.1|  373|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12842 fis, clone NT2RP2003286, weakly similar to
           PROBABLE RNA 3'-TERMINAL PHOSPHATE CYCLASE (EC 6.5.1.4).
           ).
          Length = 373

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +2

Query: 257 VELSETGTSVYYQPGILIGGQVNHNCCTQRGIGYYLEVLLALGPFCKEPLNAVLQGVTHS 436
           +E+++TGT++YYQPG+L GG V H+C   RGIGYYLE LL L PF K PL  VL+GVT+ 
Sbjct: 64  IEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTND 123

Query: 437 DLDVSVD 457
            +D SVD
Sbjct: 124 QVDPSVD 130



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 90  IKYKGSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTNGT 254
           + Y G N+ RQRL+LSTLSGR +KI  IR+ +D+PGLR++E S IRLLDK+TNG+
Sbjct: 8   LSYAGCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGS 62


>AJ276894-1|CAB89811.1|  373|Homo sapiens RNA 3'-terminal phosphate
           cyclase-like protein protein.
          Length = 373

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +2

Query: 257 VELSETGTSVYYQPGILIGGQVNHNCCTQRGIGYYLEVLLALGPFCKEPLNAVLQGVTHS 436
           +E+++TGT++YYQPG+L GG V H+C   RGIGYYLE LL L PF K PL  VL+GVT+ 
Sbjct: 64  IEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTND 123

Query: 437 DLDVSVD 457
            +D SVD
Sbjct: 124 QVDPSVD 130



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 90  IKYKGSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTNGT 254
           + Y G N+ RQRL+LSTLSGR +KI  IR+ +D+PGLR++E S IRLLDK+TNG+
Sbjct: 8   LSYAGCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGS 62


>AL353151-5|CAH72286.1|  175|Homo sapiens RNA terminal phosphate
           cyclase-like 1 protein.
          Length = 175

 Score = 91.9 bits (218), Expect = 2e-18
 Identities = 39/66 (59%), Positives = 50/66 (75%)
 Frame = +2

Query: 257 VELSETGTSVYYQPGILIGGQVNHNCCTQRGIGYYLEVLLALGPFCKEPLNAVLQGVTHS 436
           +E+++TGT++YYQPG+L GG V H+C   RGIGYYLE LL L PF K PL  VL+GVT+ 
Sbjct: 64  IEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTND 123

Query: 437 DLDVSV 454
            +D SV
Sbjct: 124 QVDPSV 129



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 90  IKYKGSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTNGT 254
           + Y G N+ RQRL+LSTLSGR +KI  IR+ +D+PGLR++E S IRLLDK+TNG+
Sbjct: 8   LSYAGCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGS 62


>AF389880-1|AAL93215.1| 3036|Homo sapiens rabconnectin protein.
          Length = 3036

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +1

Query: 481  CSLNLFLSTRLGSEIVRRGAPPLVEAKLF*CHQRHSTLHXQWAFRIE 621
            C L   L+ RL + ++    PPL   +L   HQ  ST H  WAF  E
Sbjct: 1565 CGLRYLLAMRLHTCLLT-SLPPLYRVQLL--HQGVSTCHFAWAFHSE 1608


>AB020663-1|BAA74879.2| 2237|Homo sapiens KIAA0856 protein protein.
          Length = 2237

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +1

Query: 481 CSLNLFLSTRLGSEIVRRGAPPLVEAKLF*CHQRHSTLHXQWAFRIE 621
           C L   L+ RL + ++    PPL   +L   HQ  ST H  WAF  E
Sbjct: 765 CGLRYLLAMRLHTCLLT-SLPPLYRVQLL--HQGVSTCHFAWAFHSE 808


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,396,594
Number of Sequences: 237096
Number of extensions: 1848163
Number of successful extensions: 2672
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2672
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)