Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060471.seq
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058762-1|AAL13991.1|  384|Drosophila melanogaster SD02972p pro...    99   3e-21
AE014298-1956|AAF48313.2|  384|Drosophila melanogaster CG11130-P...    99   3e-21
AY052112-1|AAK93536.1|  361|Drosophila melanogaster SD05956p pro...    33   0.48 
AL031765-11|CAA21129.1|  361|Drosophila melanogaster EG:22E5.3 p...    33   0.48 
AE014298-328|AAF45719.1|  361|Drosophila melanogaster CG4061-PA ...    33   0.48 

>AY058762-1|AAL13991.1|  384|Drosophila melanogaster SD02972p
           protein.
          Length = 384

 Score =   99 bits (238), Expect = 3e-21
 Identities = 43/73 (58%), Positives = 55/73 (75%)
 Frame = +2

Query: 257 VELSETGTSVYYQPGILIGGQVNHNCCTQRGIGYYLEVLLALGPFCKEPLNAVLQGVTHS 436
           +EL+  GTSV + PG+L GGQ+NH+CC QRGIGYYL+ L+ALGPFCK PL   L+GVT+S
Sbjct: 68  IELNPAGTSVMFSPGLLHGGQLNHDCCVQRGIGYYLDALIALGPFCKSPLQCTLRGVTNS 127

Query: 437 DLDVSVDK*DGSS 475
               SVD   G++
Sbjct: 128 KDSPSVDHIKGAA 140



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = +3

Query: 66  PAVIENDVIKYKGSNYFRQRLLLSTLSGRAIKIEDIRSTNDD-PGLREYEVSLIRLLDKV 242
           P   E + + Y+GSN+ +QRL+L+ LSG+ +KI  IRS ++  PGLREYE+SLIRLLDK+
Sbjct: 3   PIAQEGNCLIYRGSNFLKQRLILACLSGKPVKISQIRSEDETAPGLREYEISLIRLLDKI 62

Query: 243 TNGTE 257
           TNGT+
Sbjct: 63  TNGTK 67


>AE014298-1956|AAF48313.2|  384|Drosophila melanogaster CG11130-PA
           protein.
          Length = 384

 Score =   99 bits (238), Expect = 3e-21
 Identities = 43/73 (58%), Positives = 55/73 (75%)
 Frame = +2

Query: 257 VELSETGTSVYYQPGILIGGQVNHNCCTQRGIGYYLEVLLALGPFCKEPLNAVLQGVTHS 436
           +EL+  GTSV + PG+L GGQ+NH+CC QRGIGYYL+ L+ALGPFCK PL   L+GVT+S
Sbjct: 68  IELNPAGTSVMFSPGLLHGGQLNHDCCVQRGIGYYLDALIALGPFCKSPLQCTLRGVTNS 127

Query: 437 DLDVSVDK*DGSS 475
               SVD   G++
Sbjct: 128 KDSPSVDHIKGAA 140



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = +3

Query: 66  PAVIENDVIKYKGSNYFRQRLLLSTLSGRAIKIEDIRSTNDD-PGLREYEVSLIRLLDKV 242
           P   E + + Y+GSN+ +QRL+L+ LSG+ +KI  IRS ++  PGLREYE+SLIRLLDK+
Sbjct: 3   PIAQEGNCLIYRGSNFLKQRLILACLSGKPVKISQIRSEDETAPGLREYEISLIRLLDKI 62

Query: 243 TNGTE 257
           TNGT+
Sbjct: 63  TNGTK 67


>AY052112-1|AAK93536.1|  361|Drosophila melanogaster SD05956p
           protein.
          Length = 361

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 102 GSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTN 248
           G    R  L LS + G+ +++  IR++   PGL    +  + LL  +TN
Sbjct: 17  GGQALRNALSLSCILGKPVRVVKIRASRPSPGLSHQHLHGLNLLRDITN 65


>AL031765-11|CAA21129.1|  361|Drosophila melanogaster EG:22E5.3
           protein.
          Length = 361

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 102 GSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTN 248
           G    R  L LS + G+ +++  IR++   PGL    +  + LL  +TN
Sbjct: 17  GGQALRNALSLSCILGKPVRVVKIRASRPSPGLSHQHLHGLNLLRDITN 65


>AE014298-328|AAF45719.1|  361|Drosophila melanogaster CG4061-PA
           protein.
          Length = 361

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 102 GSNYFRQRLLLSTLSGRAIKIEDIRSTNDDPGLREYEVSLIRLLDKVTN 248
           G    R  L LS + G+ +++  IR++   PGL    +  + LL  +TN
Sbjct: 17  GGQALRNALSLSCILGKPVRVVKIRASRPSPGLSHQHLHGLNLLRDITN 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,468,574
Number of Sequences: 53049
Number of extensions: 561039
Number of successful extensions: 951
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)