Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060470.seq
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 163 1e-40
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 49 4e-06
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 46 4e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 45 5e-05
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 39 0.003
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.006
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.040
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.053
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.092
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.16
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 33 0.16
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 33 0.21
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.21
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 30 1.5
SB_18294| Best HMM Match : Ctr (HMM E-Value=0.0092) 30 2.0
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 30 2.0
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.0
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 2.6
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.6
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 29 3.5
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11) 28 8.0
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 163 bits (396), Expect = 1e-40
Identities = 83/138 (60%), Positives = 100/138 (72%)
Frame = +1
Query: 256 LSCGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 435
LSCGLTHTAVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPTFIGYSMQ
Sbjct: 64 LSCGLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQ 123
Query: 436 GLCKFGFYEVFKVAYAGMLDDETASLTVPSCTWRRLASAELSPDIXPVAHGRPAXVRIQT 615
GL KFGFYEVFK+ Y ML +E + L S ASAE DI +A VRIQT
Sbjct: 124 GLGKFGFYEVFKIMYGNMLGEEYSYLYRTSLYLAASASAEFFADI-ALAPMEAVKVRIQT 182
Query: 616 MPGFSSNPXGEAWPKXVK 669
PG++ E PK +K
Sbjct: 183 QPGWAGT-LREGVPKLMK 199
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/65 (47%), Positives = 39/65 (60%)
Frame = +2
Query: 62 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 241
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 242 GVGGV 256
G GG+
Sbjct: 59 GFGGI 63
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 289 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 465
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 466 FKVAYAGMLD 495
K A+ D
Sbjct: 69 CKKAFGEFYD 78
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +1
Query: 268 LTHTAVVPLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 435
+ + PLD+V+ R+Q++ KY + +GFKV VR EG GL KG P + +
Sbjct: 694 VAQSGTYPLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPT 753
Query: 436 GLCKFGFYEVFKVA-YAGM 489
+F YEV K A YA M
Sbjct: 754 IGIQFAVYEVSKSAMYARM 772
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 45.2 bits (102), Expect = 5e-05
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +1
Query: 277 TAVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 438
TAV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 439 LCKFGFYEVFKVAYAGMLDDETASLTVP 522
K + + G+ D+ +++P
Sbjct: 989 AIKLTTNDFVR----GIFSDDDGFISLP 1012
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 265 GLTHTAVVPLDLVKCRLQVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 438
G++ TA PLD +K LQV A +V+GFK+ +RE G++ L +G I + +
Sbjct: 148 GVSRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPES 207
Query: 439 LCKFGFYEVFK 471
KF YE K
Sbjct: 208 GIKFFAYEKAK 218
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 THTAVVPLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 447
+ T++ PL+++K RL + +Y+ +++ V ++EG+R +G P+ +G
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGID 303
Query: 448 FGFYEVFKVAYAGMLDDETA 507
YE K Y +++A
Sbjct: 304 LAVYETLKNFYLNYHKNQSA 323
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +1
Query: 259 SCGLTHTAVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKGWAPTFI 420
+CG A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP F+
Sbjct: 339 TCG--QLASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFL 395
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 277 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 417
T P D++K R+ + Y+ V F ++V EG+ L KGW PT+
Sbjct: 316 TISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +1
Query: 289 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 411
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 289 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 462
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 463 VFK 471
+ +
Sbjct: 94 LVR 96
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +1
Query: 256 LSCGLTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTF 417
L+ + T PLD+V+ R+Q+ D KY +N F E+G+ RGL +G + +
Sbjct: 115 LAGATSQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINY 174
Query: 418 IGYSMQGLCKFGFYEVFK 471
+ Q F YEV K
Sbjct: 175 LRVCPQVAVMFAVYEVVK 192
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +1
Query: 256 LSCGLTHTAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 420
L+ ++ TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 170 LAGAVSQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 34.7 bits (76), Expect = 0.070
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 268 LTHTAVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 441
++ T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG I
Sbjct: 47 VSRTSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSA 106
Query: 442 CKFGFYEVFKVAYA 483
+F YE +K A
Sbjct: 107 VQFAAYEEYKKGIA 120
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +1
Query: 268 LTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVR-GLAKGWAPTFIGYS 429
++ T PLD+V+ R+Q+ D KY +N +++G+R GL +G + ++
Sbjct: 185 VSQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVC 244
Query: 430 MQGLCKFGFYEVFK 471
Q FG YEV K
Sbjct: 245 PQVAIMFGVYEVTK 258
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +1
Query: 265 GLTHTAVV-PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFIGYS 429
G+T A PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT + +
Sbjct: 75 GMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL--T 132
Query: 430 MQGLCKFGFYEVFKVAYAGMLDDETA 507
+ GFY +F+ A L+ A
Sbjct: 133 IVPAMGIGFY-MFETMKAYFLETRIA 157
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 35.5 bits (78), Expect = 0.040
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Frame = +1
Query: 289 PLDLVKCRLQVDAEK--------------YKNVVN-GFKVSVREEGVRGLAKGWAPTFIG 423
P+++VK R+Q+D E YK ++ G REEGVRGL +G P +
Sbjct: 26 PIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLR 85
Query: 424 YSMQGLCKFGFYEVFKVAYAGMLDDETASL 513
++ + G YE K G D +A+L
Sbjct: 86 QAIYSSTRLGAYEPIK-NLLGATDSTSAAL 114
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 256 LSCGLTHTAVV-PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPT 414
+S G+ +A+ P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 122 VSSGVIGSAIATPTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Frame = +1
Query: 256 LSCGLTHTAVV-PLDLVKCRLQVDAEK-------YKNVVNGFKVSVREEGVRGLAKGWAP 411
L G T V P+D+V+ R + Y+ ++ +VR EG+ L KG+ P
Sbjct: 219 LVAGFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFP 278
Query: 412 TFIGYSMQGLCKFGFYEVFKVAYAGM 489
+ + + F YE + YAG+
Sbjct: 279 NWTRTGLDTIIIFFVYERLR-RYAGL 303
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +1
Query: 283 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 423
V P +++K RL V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 35.1 bits (77), Expect = 0.053
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 310 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 465
R + DA +K GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 34.3 bits (75), Expect = 0.092
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Frame = +1
Query: 256 LSCGLTHTAVVPLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREEGVRGLAKG 402
LS ++ ++P D++K R+QV ++Y V + F+ ++EEG GL KG
Sbjct: 38 LSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
Query: 403 WAPT 414
AP+
Sbjct: 98 LAPS 101
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Frame = +1
Query: 259 SCGLTHTAVV-PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPTF 417
+ G+ TA PLD+V+ RL V +++ N G ++R EEG+RGL KG P+
Sbjct: 37 TAGVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSL 96
Query: 418 IGYSMQGLCKFGFYEVFKV 474
+ + + Y++ K+
Sbjct: 97 VSIAPFLGVQQSVYDIMKL 115
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 256 LSCGLTHTAV-VPLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 420
L CG + + P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 128 LFCGFCVSFLFAPAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +1
Query: 289 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 402
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +1
Query: 241 RSWWCLSCGLTHTAVV---PLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLA 396
R W + T A+V P +++K RL V YK + + K +REEG+ L
Sbjct: 422 RDWSLVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALY 481
Query: 397 KGWAPTFI 420
KG P+F+
Sbjct: 482 KGVTPSFL 489
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +1
Query: 271 THTAVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 435
T A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P +
Sbjct: 107 TTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 436 GLCKFGFYE 462
+ F F E
Sbjct: 167 TVLTFIFLE 175
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +1
Query: 271 THTAVVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGLAKGWAPT 414
T + PLD VKC LQ++ Y V+ + RE GVRG+ KG + T
Sbjct: 151 TSFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 268 LTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKV---SVREEGVRGLAKGWAPTFIGYSMQG 438
+ HT PL +K RLQ++ + + FK+ + + EG+R +G +++G S +
Sbjct: 847 INHTVTNPLWFIKTRLQLENQGGTR-ASAFKIVSMAYKAEGIRAFYRGLTASYVGIS-ET 904
Query: 439 LCKFGFYEVFK 471
+ F YE K
Sbjct: 905 VVHFTIYERLK 915
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 280 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF-IGYSMQGLCKFGF 456
A+ P++++K RLQ+ Y+ V++ +EEG+R + + + Q L F
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTL-HFTV 72
Query: 457 YEVFKVAYAGMLDDETASLTVPSCTWRRLASAELSP 564
YE + A + + + + T +ASA +P
Sbjct: 73 YEYARKALNPLGGYDPKTHVIAGATAGAVASAITTP 108
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 277 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 420
TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 85 TAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_18294| Best HMM Match : Ctr (HMM E-Value=0.0092)
Length = 267
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 409 PTFIGYSMQGLCKFGFYEVFK-VAYAGMLDDETASLTV 519
P+ +GYS++ C FGF K V+ + ++DD T+S T+
Sbjct: 29 PSPVGYSIRVSCSFGFIVTLKNVSGSLVIDDMTSSETL 66
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +1
Query: 253 CLSCGLTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 417
CL+ AV PLD++K RLQ+ Y +++ K EG+ KG P
Sbjct: 213 CLAGMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRM 272
Query: 418 I 420
I
Sbjct: 273 I 273
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 289 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 462
P D+VK RLQ++ Y + + G+ GL +G P + ++ + YE
Sbjct: 543 PADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRRTLMSAMAWTIYE 600
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 460 EVFKVAYAGMLDDETASLTVPSCTWRRLASAELSPDIXPVAH 585
E + Y G +++ ASL VP+ R A+A L+ D P+AH
Sbjct: 416 ETHRDHYGGDPNEDHASLHVPATRRTRRAAAYLTSDQTPLAH 457
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +1
Query: 289 PLDLVKCRLQVDAEK---------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 441
PL++VK R+Q+ E Y+NV + + EG+ + KG P I +
Sbjct: 24 PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFPALIYQVIMNG 83
Query: 442 CKFGFYEV 465
+ G Y++
Sbjct: 84 TRLGSYQI 91
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1
Query: 289 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 441
P D++K R+Q D +YK +++ S +EEG+ +G PT + +Q L
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 216 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 55
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 130 PVDGRARGYRADRWHGGVCCG 192
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +1
Query: 289 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 444
P+DL K ++QV + Y+NV + + G+RG +G + T +
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 445 KFGFYEVFK 471
FGFYE K
Sbjct: 281 FFGFYEFTK 289
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 289 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 459
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFY 85
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 391 LAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETASLTVPS 525
L KGW T ++M G K+G E+ K+ D +++ P+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKLCKEWGTTDFNYAMSSPA 167
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 128 CQSTVAPVAIEQTGGMAASAAVPTES 205
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 73 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 207
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11)
Length = 155
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 310 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 465
R + DA +K GF ++ +EEG L K T + GL KF +YEV
Sbjct: 78 RTKPDATDKIYGEFQGFNITYKEEGGGTLYKTTNHTTRSCIITGLKKFTYYEV 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,008,624
Number of Sequences: 59808
Number of extensions: 418134
Number of successful extensions: 1156
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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