Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060468.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.77 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.4  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -2

Query: 328 YFPLCTDLWECRYHQLLRTFRKRGVVFRRRSVGKII 221
           +F +C D        ++  FRKR V ++  ++G ++
Sbjct: 77  FFAICCDFIALIVVNIVHVFRKRRVNYKDSNIGLVV 112


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -2

Query: 484 ACDRNDSCMAMRGDHIAPSEREVPCRPTFVRPSCPG 377
           AC  N +C+   G        E  C P FV P C G
Sbjct: 268 ACHNNGTCLDKVGGF------ECKCPPGFVGPRCEG 297


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 510 EAGTRPGPAPAIVTTPVW 457
           + G R    P +VTTP W
Sbjct: 38  QGGRRRAARPGVVTTPRW 55


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 428 RWRDMVAPHRHTGVV 472
           RWRD +    H+GVV
Sbjct: 310 RWRDRIYDAIHSGVV 324


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 347 LTKANPL-LSLVYRSLGM*ISPTSPHLSKTRRSLQASF 237
           L    PL L+L+Y+ LG+   P S H S   R L   F
Sbjct: 47  LLPKTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPF 84


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 347 LTKANPL-LSLVYRSLGM*ISPTSPHLSKTRRSLQASF 237
           L    PL L+L+Y+ LG+   P S H S   R L   F
Sbjct: 3   LLPKTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPF 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,005
Number of Sequences: 336
Number of extensions: 2735
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)