Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060465.seq
(662 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033998-1|AAH33998.2| 270|Homo sapiens LOC124512 protein protein. 83 9e-16
BC045819-1|AAH45819.1| 300|Homo sapiens LOC124512 protein protein. 80 6e-15
BC103501-1|AAI03502.1| 226|Homo sapiens hypothetical protein LO... 36 0.098
BC099841-1|AAH99841.1| 226|Homo sapiens family with sequence si... 36 0.098
BC016395-1|AAH16395.1| 226|Homo sapiens family with sequence si... 36 0.098
AF455816-1|AAL66294.1| 226|Homo sapiens hepatocellular carcinom... 36 0.098
BC033720-1|AAH33720.1| 218|Homo sapiens family with sequence si... 34 0.52
BC009462-1|AAH09462.1| 90|Homo sapiens FAM119A protein protein. 34 0.52
AK093812-1|BAC04229.1| 218|Homo sapiens protein ( Homo sapiens ... 34 0.52
AF455817-1|AAL66295.1| 218|Homo sapiens hepatocellular carcinom... 34 0.52
AC079767-2|AAX93175.1| 218|Homo sapiens unknown protein. 34 0.52
AF366498-1|AAK62912.1| 75|Homo sapiens T-cell receptor V delta... 31 4.9
AF366497-1|AAK62911.1| 75|Homo sapiens T-cell receptor V delta... 31 4.9
>BC033998-1|AAH33998.2| 270|Homo sapiens LOC124512 protein protein.
Length = 270
Score = 83.0 bits (196), Expect = 9e-16
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Frame = +2
Query: 275 VTLTDSLTLPRSLRHLSACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCF 454
V L+DS LP L C+ N L P+ LQ+VGLTWG DL L P D+ILASD F
Sbjct: 127 VILSDSSELPHCLEVCRQSCQMNNL-PH--LQVVGLTWGHISWDLLALPPQDIILASDVF 183
Query: 455 YEPSQFEEVLSTVAYLL-EALNARFLCSYQERSTDWSIE 568
+EP FE++L+T+ +L+ + + +YQ RS DWS+E
Sbjct: 184 FEPEDFEDILATIYFLMHKNPKVQLWSTYQVRSADWSLE 222
>BC045819-1|AAH45819.1| 300|Homo sapiens LOC124512 protein protein.
Length = 300
Score = 80.2 bits (189), Expect = 6e-15
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +2
Query: 275 VTLTDSLTLPRSLRHLSACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCF 454
V L+DS LP L C+ N L P+ LQ+VGLTWG DL L P D+ILASD F
Sbjct: 157 VILSDSSELPHCLEVCRQSCQMNNL-PH--LQVVGLTWGHISWDLLALPPQDIILASDVF 213
Query: 455 YEPSQFEEVLSTVAYLL-EALNARFLCSYQERSTDWSIE 568
+EP FE++L+T+ +L+ + + +YQ RS WS+E
Sbjct: 214 FEPEDFEDILATIYFLMHKNPKVQLWSTYQVRSAGWSLE 252
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/68 (41%), Positives = 36/68 (52%)
Frame = +1
Query: 52 FRARSSTNGDTRGEYLEIVIPELLSAGYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGC 231
FR G LE+ +P++L Y Y WP A +L YLW RR + G +LE+G
Sbjct: 82 FRFSEEPGPGADGAVLEVHVPQVLHLQYGMYVWPCAVVLAQYLWFHRRSLPGKAILEIGA 141
Query: 232 GTGLPGIL 255
G LPGIL
Sbjct: 142 GVSLPGIL 149
>BC103501-1|AAI03502.1| 226|Homo sapiens hypothetical protein
LOC25895, isoform a protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.098
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A L Y +Q RG +V+ELG GTG+ GIL
Sbjct: 51 GVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92
>BC099841-1|AAH99841.1| 226|Homo sapiens family with sequence
similarity 119, member B protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.098
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A L Y +Q RG +V+ELG GTG+ GIL
Sbjct: 51 GVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92
>BC016395-1|AAH16395.1| 226|Homo sapiens family with sequence
similarity 119, member B protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.098
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A L Y +Q RG +V+ELG GTG+ GIL
Sbjct: 51 GVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92
>AF455816-1|AAL66294.1| 226|Homo sapiens hepatocellular
carcinoma-associated antigen HCA557a protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.098
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A L Y +Q RG +V+ELG GTG+ GIL
Sbjct: 51 GVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92
>BC033720-1|AAH33720.1| 218|Homo sapiens family with sequence
similarity 119, member A protein.
Length = 218
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A +L YL +RG +ELG GTGL GI+
Sbjct: 41 GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82
>BC009462-1|AAH09462.1| 90|Homo sapiens FAM119A protein protein.
Length = 90
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A +L YL +RG +ELG GTGL GI+
Sbjct: 41 GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82
>AK093812-1|BAC04229.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ36493 fis, clone THYMU2018547. ).
Length = 218
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A +L YL +RG +ELG GTGL GI+
Sbjct: 41 GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82
>AF455817-1|AAL66295.1| 218|Homo sapiens hepatocellular
carcinoma-associated antigen HCA557b protein.
Length = 218
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A +L YL +RG +ELG GTGL GI+
Sbjct: 41 GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82
>AC079767-2|AAX93175.1| 218|Homo sapiens unknown protein.
Length = 218
Score = 33.9 bits (74), Expect = 0.52
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 130 GYSFYTWPSAPLLXWYLWTQRRHIRGLRVLELGCGTGLPGIL 255
G + W +A +L YL +RG +ELG GTGL GI+
Sbjct: 41 GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82
>AF366498-1|AAK62912.1| 75|Homo sapiens T-cell receptor V delta 1
protein.
Length = 75
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -3
Query: 507 SSRYATVDSTSSNCDGS*KQSDARIRSTGRKLCRSPKNKPHVRPTICKSRLGT 349
S++Y S C G + +D I G ++ P+++PH +P++ + GT
Sbjct: 7 SAKYFCALGELSPCRGYARYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMKNGT 59
>AF366497-1|AAK62911.1| 75|Homo sapiens T-cell receptor V delta 1
protein.
Length = 75
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -3
Query: 507 SSRYATVDSTSSNCDGS*KQSDARIRSTGRKLCRSPKNKPHVRPTICKSRLGT 349
S++Y S C G + +D I G ++ P+++PH +P++ + GT
Sbjct: 7 SAKYFCALGELSPCRGYARYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMKNGT 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,828,759
Number of Sequences: 237096
Number of extensions: 2098789
Number of successful extensions: 4518
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4516
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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