Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060464.seq
(684 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 37 0.013
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 36 0.031
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 36 0.040
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 33 0.16
SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 31 0.66
SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06) 31 0.87
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 30 1.5
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_37238| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 3.5
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 29 3.5
SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_12190| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 29 4.6
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 28 6.1
SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05) 28 8.1
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 28 8.1
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/117 (24%), Positives = 54/117 (46%)
Frame = +1
Query: 292 HSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKT 471
H R + ++ L L + +S + + F L + +L N L LPR V + L +++
Sbjct: 61 HVPRNFPMQVSLLSLYNNLISTIHSNAFRNLTALRSLNLGANRLSVLPRSVFRDLASLRS 120
Query: 472 LDLCRNKITKLTEKISGIFKNWSICWSLTIKYSEIEKDALPKGLKHVHLGNQ*IKTH 642
LDL N+++ L E F+ S L + ++ + A+P+ H Q ++ H
Sbjct: 121 LDLSANRLSSLPE---DTFEGLSSLQDLFLDFNRLR--AIPETTFHGLAALQRLRLH 172
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +1
Query: 295 SFREL-GLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKT 471
+FR L GL I L LN +N++ L + +FT+ + ++ NSL LPR + L
Sbjct: 207 TFRNLRGLEI--LYLNNNNITELDQRLFTRTPSLKLLFVSFNSLATLPRGLFYSLSTDAK 264
Query: 472 LDLCRNKITKLTEKISGIFKNWSICWSLTIKYSEIEKDALPKGL 603
+ L N K+S + K W SL + I K + P GL
Sbjct: 265 VSLHNNPFV-CDCKLSWL-KQWIRTRSLIYSLNLI-KCSSPPGL 305
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 313 LSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNK 492
L T L LN NL + V L +++ L N L LP + + LP++K LDL N
Sbjct: 17 LGTTTLDLNRKNLIEIPPKVLD-LQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNH 75
Query: 493 ITKLTEKI 516
I ++ E +
Sbjct: 76 INEVPENL 83
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 SITRLKLNFD--NLSVLKESVFTKLDL-VDYFSLADNSLPELPRHVLQHLPHVKTLDLCR 486
++ R +N+ NL L ++ F L + LA+NSL ELP +L LP ++ LD+
Sbjct: 316 NVNRFSVNWGHKNLHALHKAWFVDYSLNLVRIDLANNSLHELPEELLNTLPLLEELDVSN 375
Query: 487 NKITKLTE 510
N + L E
Sbjct: 376 NNLVSLPE 383
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +1
Query: 259 ISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPR 438
+S + + + +F L +S+ L ++F+ + E L L++ + +NSL +P
Sbjct: 198 VSATGMKKITQGTFGSL-MSLEFLDVSFNEIRHFDEESLACLPLLEVLHINNNSLTTVPL 256
Query: 439 HVLQHLPHVKTLDLCRNKIT 498
H L+ + +K LDL N I+
Sbjct: 257 HALRKVKFLKELDLSANLIS 276
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 319 ITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKIT 498
I L L+ + L ++ E VF V +LADN L E+ L L + L+L NK+
Sbjct: 28 IHSLDLSSNQLKIIPEFVFRGFSNVKNLTLADNDLEEIGNASLSGLKSLLYLNLANNKLR 87
Query: 499 KLTEKIS 519
K +S
Sbjct: 88 KWNGNLS 94
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKI 495
S+T L L + L+ L + VF +L + L +NSL ELP L L ++ L+L NK+
Sbjct: 64 SLTELYLTGNLLTSLPD-VFARLGNLTELHLNENSLEELPES-LGKLSKLRVLNLTGNKL 121
Query: 496 TKLTE 510
KL +
Sbjct: 122 EKLRD 126
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +1
Query: 328 LKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKL 504
L+L+ ++L+ L E+ LV+ L N L LP +L +VKTLDL RNK++++
Sbjct: 385 LQLSKNHLTELPENFGNLTSLVE-LRLDSNQLSSLPAS-FANLTNVKTLDLYRNKLSEI 441
>SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 382 LDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKL 504
L +D SL L ++ +LQ L ++ LDL NK+ KL
Sbjct: 24 LSAIDTLSLQGQGLSQIESEILQQLTAIEELDLSNNKLVKL 64
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 340 FDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNK 492
++ LS L +S+ +D F++ N++ ELP +L L ++ +L L RNK
Sbjct: 2 YNQLSSLPDSL-ANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNK 51
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 391 VDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNK 492
+D F++ N++ ELP +L L ++ +L L RNK
Sbjct: 287 IDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNK 320
>SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06)
Length = 298
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/91 (23%), Positives = 43/91 (47%)
Frame = +1
Query: 319 ITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKIT 498
+T L L+ + L + F L + +F + DN + ++ V Q++ + LD+ RNK+
Sbjct: 147 LTILYLSNNFLDSIPGGCFLDLKSLKHFFVGDNQIKKVADDVFQNVSNGFKLDIGRNKMN 206
Query: 499 KLTEKISGIFKNWSICWSLTIKYSEIEKDAL 591
+ + + + S L+ K EK+ +
Sbjct: 207 GVPDAVKRVMDRLSYLIQLSRKQWIREKNLM 237
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +1
Query: 328 LKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLT 507
L L + L ++ E V TKL+ + L+DN + LP L L +++ L L N++ L
Sbjct: 172 LNLEANELKIVPE-VVTKLEKLQVLILSDNEIGALPAD-LNALENLRELYLDDNRLMSLP 229
Query: 508 EKI 516
+K+
Sbjct: 230 KKL 232
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 364 ESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLT 507
E F + + +L++N++ + L H+K LDL NK++ +T
Sbjct: 154 EPFFQNRSQLVHLNLSNNAIESIASEAFSQLIHLKVLDLRHNKLSTIT 201
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +1
Query: 319 ITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKIT 498
+ RL L + L + + K+ + Y L+DN L +LPR + P +KTL L N +
Sbjct: 396 LCRLDLQKNKLRKIPSGLL-KMTCLKYLDLSDNELTDLPRK--EWSPVLKTLYLSGNLLE 452
Query: 499 KLTEKIS 519
L + ++
Sbjct: 453 TLPDSMA 459
>SB_37238| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1003
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 214 SFNE*VQYRN*NRPDISYSQLPDFAEHSFRELGL-SITRLKLNFDNLSVLKESVFTK 381
SF+ VQ N + P SQL DF+ H +L + S + K NF++ L ES+ K
Sbjct: 44 SFHTSVQGSNPHVPLSPSSQLSDFSRHRLTQLQVPSFSGDKTNFEDYWALFESLVDK 100
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/61 (22%), Positives = 35/61 (57%)
Frame = +1
Query: 343 DNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEKISG 522
+N + S +L ++ L +N++ LP + + LP+++ +++ NK+T+L E ++
Sbjct: 155 NNCLICLSSRIIELQSLEKLLLMENNITVLPAEIAK-LPNLQFVNVFDNKLTRLPESLTD 213
Query: 523 I 525
+
Sbjct: 214 L 214
>SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1421
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 214 SFNE*VQYRN*NRPDISYSQLPDFAEHSFRELGL-SITRLKLNFDNLSVLKESVFTK 381
SF+ VQ N + P SQL DF+ H + L + S + K NF++ L ES+ K
Sbjct: 507 SFHTSVQGSNPHVPLSPSSQLSDFSRHRLKPLQVPSFSGDKTNFEDYWALFESLVDK 563
>SB_12190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 331 KLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLD 477
+L DN++VLKE + T L L + F + + + ++ ++ Q + VK +D
Sbjct: 162 QLGLDNINVLKEQLTTNLSLANCFGILSDEVCDV-SNIEQLVTFVKYVD 209
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 343 DNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEKISG 522
D LSV S + KL+ A N + +P +LPH+ LDL N+I L +
Sbjct: 52 DLLSVYSVSFYEKLNF------AFNCITAVPYEFSMYLPHLVHLDLSYNRIGFLPDSFGY 105
Query: 523 IF 528
+F
Sbjct: 106 LF 107
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +1
Query: 256 DISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELP 435
D+S + +F L S+ LKL+ + +S ++ F + + +L N L +
Sbjct: 91 DLSRNFFTSILASAFNRLS-SLEVLKLSKNRISTIR-GAFWGQNKLQQLNLERNRLSHIQ 148
Query: 436 RHVLQHLPHVKTLDLCRNKITKLTE 510
+HL +K L+L N+I +++
Sbjct: 149 DTTFKHLLALKVLNLANNRIYHISQ 173
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNK 492
++ L L F+N+ ++ F L+ ++Y +++DN + L + LD+ NK
Sbjct: 93 ALRNLSLTFNNIHTIRARGFAGLNKLEYLNMSDNRISTWEIDRDTELRSLVVLDISGNK 151
>SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05)
Length = 252
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +1
Query: 256 DISYSQLPDFAEHSFRELGL---SITRLK-LNFDNLSVLKESVFTKLDLVDYFSLADNSL 423
D+ LP LG S TRLK L+ ++ L L++ +L N++
Sbjct: 23 DVKSLSLPGTYHEKITSLGTALKSFTRLKNLDLSRNAIQSLQGVESLQLLETLNLYYNNI 82
Query: 424 PELPR-HVLQHLPHVKTLDLCRNKITK 501
L L++L ++K LDL N +TK
Sbjct: 83 SYLQDLSALKYLTNLKELDLRLNPVTK 109
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTL---DLCR 486
++ L + +NL ++ ES+ KL L + L+ N + LP V + + TL D+
Sbjct: 289 NLKTLFFSANNLEIVPESI-CKLPLRE-LDLSINKISSLPDFVRASIGDMSTLVELDISS 346
Query: 487 NKITKLTEKI 516
NKIT L + I
Sbjct: 347 NKITALPKSI 356
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,857,562
Number of Sequences: 59808
Number of extensions: 404668
Number of successful extensions: 912
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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