Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060464.seq
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 36 0.020
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 36 0.036
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 36 0.036
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 35 0.047
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 35 0.047
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 35 0.047
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 35 0.047
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 35 0.047
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 35 0.062
AF003132-2|AAB54134.2| 568|Caenorhabditis elegans Hypothetical ... 33 0.14
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 33 0.19
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 33 0.19
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 33 0.19
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 33 0.19
AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical ... 32 0.44
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 31 0.77
AF078787-2|AAC26950.1| 407|Caenorhabditis elegans Hypothetical ... 31 1.0
AF025453-10|AAK31402.3| 487|Caenorhabditis elegans Hypothetical... 30 1.3
Z79601-3|CAB01883.2| 640|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 30 1.8
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 29 2.3
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 29 2.3
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 29 2.3
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 29 2.3
AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical... 29 2.3
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 29 3.1
U88184-9|ABC71833.1| 843|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 28 7.1
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 28 7.1
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 27 9.4
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 27 9.4
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 27 9.4
AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical... 27 9.4
>Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical
protein F10F2.4 protein.
Length = 656
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = +1
Query: 235 YRN*NRPDISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLAD 414
Y N D+S +QL + +F +GL + L L+ + LS L + L L+D L+
Sbjct: 373 YPNLQHFDVSSNQLSEIDPQAFPSIGLGLISLDLSSNQLSSLPHPILPSLLLLD---LSF 429
Query: 415 NSLPELPRHVLQHLPHVKTLDLCRN 489
N++ L H LP ++ L + N
Sbjct: 430 NTISHLDPHFFTGLPMLQQLRIASN 454
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +1
Query: 328 LKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLT 507
L L+ + + L F L +++ +LA N + EL R ++P ++ L L NKITKLT
Sbjct: 178 LHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLT 237
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 310 GLSITRLKLNFDNLSVLKESVFTKLD-LVDYFSLADNSLPELPRHVLQHLPHVKTLDLCR 486
GL I RL L+ + + + ++ F ++ +++ L N + ++P L LP++ LDL
Sbjct: 49 GLFIRRLDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSN 108
Query: 487 NKITKLTEKISGIFKNWSICWSLTIKYSEI 576
N I ++ E+ IF N + + + + ++I
Sbjct: 109 NSIVEIQEQ--EIFPNLNKLYDINLGSNKI 136
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/82 (20%), Positives = 41/82 (50%)
Frame = +1
Query: 259 ISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPR 438
++++++ + + ++F SI L L+ + L L + + L + S DN + + R
Sbjct: 276 LAHNKISNISSNAFTNS--SIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINR 333
Query: 439 HVLQHLPHVKTLDLCRNKITKL 504
+ + LDL +N++T++
Sbjct: 334 NAFYDAASLVMLDLAKNQLTEI 355
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1
Query: 313 LSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNK 492
++ T L + + L+ L +S F L + Y L++NS+ ++ +L P +K LDL NK
Sbjct: 44 IATTNLYFSNNLLNSLSKSNFQALPNLQYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNK 103
Query: 493 I 495
I
Sbjct: 104 I 104
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1
Query: 313 LSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNK 492
++ T L + + L+ L +S F L + Y L++NS+ ++ +L P +K LDL NK
Sbjct: 44 IATTNLYFSNNLLNSLSKSNFQALPNLQYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNK 103
Query: 493 I 495
I
Sbjct: 104 I 104
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +1
Query: 259 ISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPR 438
I Y Q F + R+ S+ +L L+ +NL+ + + L+ + SL N L E+P
Sbjct: 144 IEYVQDNAFLSYHSRD---SLLKLDLSANNLTAIHPTGLLGLENLSQLSLDKNLLSEIPS 200
Query: 439 HVLQHLPHVKTLDLCRNKI 495
L+++P ++ L L N+I
Sbjct: 201 QALENIPSLEDLSLGVNRI 219
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 35.9 bits (79), Expect = 0.027
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 274 LPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTK--LDLVDYFSLADNSLPELPRHVL 447
+P ++F+ +I RL LN + L + + F LD + L DN+L ++P+ +
Sbjct: 71 IPTIPANAFQSF--TILRLVLNRNTLQNIDDQAFNGPLLDSLIELDLNDNNLGQIPQTGI 128
Query: 448 QHLPHVKTLDLCRNKITKLTEKISGIFKNWSICWSLTI 561
L +++ L L RN+I +L+ F++ + L +
Sbjct: 129 PRLRNLRKLYLNRNRINQLSSTAFNAFESRDLLLKLEL 166
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 403 SLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEK-ISG 522
SL++N++ E+ HLP++ TLDL NKI L K +SG
Sbjct: 354 SLSNNNIREVHELSFDHLPNLHTLDLANNKIMSLQNKSLSG 394
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 313 LSITRLKLNFDNLSVLKESVFTKLD-LVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRN 489
L I +L L+ + + + + FT L+ ++ SL++N+L E+P L L + L L N
Sbjct: 83 LRIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCN 142
Query: 490 KITKLTEK 513
KI +T K
Sbjct: 143 KIENITTK 150
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 403 SLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEK-ISG 522
SL++N++ E+ HLP++ TLDL NKI L K +SG
Sbjct: 354 SLSNNNIREVHELSFDHLPNLHTLDLANNKIMSLQNKSLSG 394
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 313 LSITRLKLNFDNLSVLKESVFTKLD-LVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRN 489
L I +L L+ + + + + FT L+ ++ SL++N+L E+P L L + L L N
Sbjct: 83 LRIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCN 142
Query: 490 KITKLTEK 513
KI +T K
Sbjct: 143 KIENITTK 150
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 35.1 bits (77), Expect = 0.047
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 259 ISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPR 438
+ + + + +SF L + L N ++L+ ++ +F + + S+ +N+L L
Sbjct: 324 VQNNNIVQISRNSFESLDKLVVLLVGN-NSLAKIERGMFDGMKNLQQLSIRNNTLTALDA 382
Query: 439 HVLQHLPHVKTLDLCRNKITKLTEKISGIFKNWSICWSLTI---KYSEIEKDALPKGLKH 609
L H+ TLDL NKI + E G F S + L + K S + K + +
Sbjct: 383 SSFAQLAHLTTLDLGHNKIHDIEE---GTFDKLSKLFWLDLSNNKISGFKTSVFKKKISN 439
Query: 610 VHL-GNQ 627
+ L GNQ
Sbjct: 440 ILLDGNQ 446
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKI 495
++ +L L NL ++++ F L+ ++ L++N+L + + L +++ LDL NKI
Sbjct: 200 NLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKI 259
Query: 496 TKLTEK 513
+ + K
Sbjct: 260 SNVEMK 265
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 325 RLKLNFDNLSVLKESVFTKLD-LVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITK 501
++KL LS L+ + F L + SL +N + +L + + L +KTLDL NKI +
Sbjct: 106 QVKLERCGLSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQE 165
Query: 502 L 504
+
Sbjct: 166 I 166
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 376 TKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLT 507
T+ D ++ SLA N+L ++ QH P++ TL L N+I +L+
Sbjct: 316 TRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELS 359
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKI 495
++ +L L NL ++++ F L+ ++ L++N+L + + L +++ LDL NKI
Sbjct: 200 NLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKI 259
Query: 496 TKLTEK 513
+ + K
Sbjct: 260 SNVEMK 265
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 325 RLKLNFDNLSVLKESVFTKLD-LVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITK 501
++KL LS L+ + F L + SL +N + +L + + L +KTLDL NKI +
Sbjct: 106 QVKLERCGLSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQE 165
Query: 502 L 504
+
Sbjct: 166 I 166
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 376 TKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEK 513
T+ D ++ SLA N+L ++ QH P++ TL L N+I +L+ +
Sbjct: 316 TRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELSSR 361
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKI 495
++ +L L+ ++++ L VF+ L + L+ NSL LP V L ++KTL + N +
Sbjct: 71 NLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDV 130
Query: 496 TKLTEKISGI 525
E +G+
Sbjct: 131 QLGPECFAGL 140
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = +1
Query: 256 DISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELP 435
D+S + L F +L ++ L ++ +++ + E F L + S+ADN L LP
Sbjct: 100 DLSSNSLLSLPNEVFSKLK-NLKTLIISSNDVQLGPEC-FAGLSQLQTLSIADNRLSFLP 157
Query: 436 RHVLQHLPHVKTLDLCRNKITKLTEKI 516
VL+ L ++ LDL NK+ + +
Sbjct: 158 PSVLKPLSGLRNLDLSANKLLSMPASV 184
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 322 TRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITK 501
T L L+ + +S L + ++ L +NS+ L V LP ++ LDL N +
Sbjct: 49 TVLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLS 108
Query: 502 LTEKISGIFKN 534
L ++ KN
Sbjct: 109 LPNEVFSKLKN 119
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKI 495
++ +L L+ ++++ L VF+ L + L+ NSL LP V L ++KTL + N +
Sbjct: 71 NLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDV 130
Query: 496 TKLTEKISGI 525
E +G+
Sbjct: 131 QLGPECFAGL 140
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = +1
Query: 256 DISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELP 435
D+S + L F +L ++ L ++ +++ + E F L + S+ADN L LP
Sbjct: 100 DLSSNSLLSLPNEVFSKLK-NLKTLIISSNDVQLGPEC-FAGLSQLQTLSIADNRLSFLP 157
Query: 436 RHVLQHLPHVKTLDLCRNKITKLTEKI 516
VL+ L ++ LDL NK+ + +
Sbjct: 158 PSVLKPLSGLRNLDLSANKLLSMPASV 184
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 322 TRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITK 501
T L L+ + +S L + ++ L +NS+ L V LP ++ LDL N +
Sbjct: 49 TVLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLS 108
Query: 502 LTEKISGIFKN 534
L ++ KN
Sbjct: 109 LPNEVFSKLKN 119
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +1
Query: 292 HSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKT 471
HS + ++ RL+L+ + + E +F L + + + + + PR + H+P++ T
Sbjct: 87 HSLFQGFRNLDRLELDRCLIDTVPEGLFAGLGQLYSLIVKNAKITDFPREIFAHVPNLMT 146
Query: 472 LDLCRNKI 495
LDL N++
Sbjct: 147 LDLSGNRL 154
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRN 489
++T L++ ++ + E++ TKL + + L+DN L +L L HL +K + L N
Sbjct: 481 NLTHLEITSSAITSIPETI-TKLPSLTHLYLSDNPLDQLSSTSLNHLDGLKKIRLGGN 537
>AF003132-2|AAB54134.2| 568|Caenorhabditis elegans Hypothetical
protein F37E3.2 protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +1
Query: 256 DISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELP 435
D+SY+Q+ FA H+F + + + L L + + +L F K + + L+ ++ L
Sbjct: 245 DLSYNQITSFASHTFSKC-IDLRVLDLTGNPIKMLPYKPFAKNIKLKWLKLSRTNITTLT 303
Query: 436 RHVLQHLPHVKTLDLCRNKITKLT 507
L +KTL L R I ++
Sbjct: 304 PDHFYGLNALKTLSLSRMPIQSIS 327
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLD--LVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRN 489
++T L LN + L+ + V LV+ F +A+N L +P VL + ++ LD+ +N
Sbjct: 241 NLTHLNLNGNKLNRIDGDVLKGCTDTLVELF-IANNYLEHIPHGVLSGMKQLEHLDISKN 299
Query: 490 KITKLTEKIS 519
KI L + S
Sbjct: 300 KIMSLKKPTS 309
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +1
Query: 235 YRN*NRPDISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKL-DLVDYFSLA 411
+R DISY+Q+ + SF +G + L L+++ ++ L + + LA
Sbjct: 167 FRKIRELDISYNQIQTVEDSSFETVG-HMQSLDLSYNRIAYLPRGMLKNFAKTLKTLKLA 225
Query: 412 DNSLPELPRHVLQHLPHVKTLDLCRNKITKL 504
+N + P L+ L ++ L+L NK+ ++
Sbjct: 226 ENMIHATP-EALRDLRNLTHLNLNGNKLNRI 255
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 268 SQLPDFAEHSFRELGLS-ITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHV 444
+QL E+ F S + L L + + + F+ LD + L+ N++ +
Sbjct: 424 NQLDIITENMFGSSSSSELKSLNLAHNKIHSISSRSFSDLDNLQQLRLSHNNIRTITSMT 483
Query: 445 LQHLPHVKTLDLCRNKITKL 504
+L +++ LDL N+I K+
Sbjct: 484 FSNLRNLRYLDLSHNRIIKI 503
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 358 LKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEKIS 519
+ E V L ++ FSL + ELP+ +L LPH++ L++ N++ L + S
Sbjct: 137 MTEDVLMPLARLEKFSLTRSRNIELPQRLLCSLPHLQVLNISSNELPSLRREES 190
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/114 (21%), Positives = 51/114 (44%)
Frame = +1
Query: 256 DISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELP 435
D+SY+Q+ F S+ + L L+ + + L F L ++ L+ NS+ L
Sbjct: 297 DLSYNQIQSFHISSWSHTP-KLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLH 355
Query: 436 RHVLQHLPHVKTLDLCRNKITKLTEKISGIFKNWSICWSLTIKYSEIEKDALPK 597
+ L + + LDL N + E + N S+ + +++++ + +PK
Sbjct: 356 KFALVGMSSLHKLDLSSNTLAVCVED-GAVLYNTSMPFLRSLRFTNNQLRVIPK 408
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/114 (21%), Positives = 51/114 (44%)
Frame = +1
Query: 256 DISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELP 435
D+SY+Q+ F S+ + L L+ + + L F L ++ L+ NS+ L
Sbjct: 297 DLSYNQIQSFHISSWSHTP-KLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLH 355
Query: 436 RHVLQHLPHVKTLDLCRNKITKLTEKISGIFKNWSICWSLTIKYSEIEKDALPK 597
+ L + + LDL N + E + N S+ + +++++ + +PK
Sbjct: 356 KFALVGMSSLHKLDLSSNTLAVCVED-GAVLYNTSMPFLRSLRFTNNQLRVIPK 408
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 358 LKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEKIS 519
+ E V L ++ FSL + ELP+ +L LPH++ L++ N++ L + S
Sbjct: 137 MTEDVLMPLARLEKFSLTRSRNIELPQRLLCSLPHLQVLNISSNELPSLRREES 190
>AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical
protein Y54E10A.6 protein.
Length = 507
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 205 NRTSFNE*VQYRN*NRPDISYSQLPDF-AEHSFRELGLSITRLKLNFDNLSVLKESVFTK 381
N +SF + N + D +++ + A + L + + L+ +++ V+ +S+ +
Sbjct: 127 NESSFPDISNLSNLHIFDAAHNTISKIPASLTSHNLSAKLHTIILSHNSIEVIPDSL-SN 185
Query: 382 LDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRN 489
L + + +N L ++P V+ HLP +K LD+ +N
Sbjct: 186 LKQLKELKIDENKLKDVPS-VIAHLPKLKVLDISKN 220
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 608 CFNPLGNASFSISEYLIVSDQQMLQFLNIPEIFSVSLVILFLQRSSV 468
CF PLG F +++ F++I IFS+ L +L+ + V
Sbjct: 176 CFIPLGKDGFIFGSFVLNMYTSAAVFMSIASIFSILLTYFYLEENYV 222
>AF078787-2|AAC26950.1| 407|Caenorhabditis elegans Hypothetical
protein T17A3.3 protein.
Length = 407
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 496 LSCSYRDRVSLREAGAEAHALVTPAKSCLL 407
LS SYR LR+AG AH L P S +L
Sbjct: 355 LSYSYRRSARLRDAGRHAHRLAEPPASTIL 384
>AF025453-10|AAK31402.3| 487|Caenorhabditis elegans Hypothetical
protein C08F1.1 protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/29 (37%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 502 LTEKISGIFKN-WSICWSLTIKYSEIEKD 585
LT++++ IF+ ICW+ ++K+ ++EKD
Sbjct: 422 LTDRVTHIFERPEGICWTKSLKWEDLEKD 450
>Z79601-3|CAB01883.2| 640|Caenorhabditis elegans Hypothetical
protein K09A9.1 protein.
Length = 640
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 346 NLSVLKESVFTKLDLVD-YFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEKISG 522
N+ + K+ + K+DL + Y++ + L LP++VL P + + CRN T LTE
Sbjct: 460 NIILKKQDMIVKMDLFEMYYNTYKDRL--LPKNVL---PMYEEMKACRNDSTILTEMAKR 514
Query: 523 IFKN 534
F++
Sbjct: 515 DFRS 518
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LADNSLPELPRHVLQHLPHVKTLDLCRNKITKL 504
L +N + + HV +++P +K LDL N +T+L
Sbjct: 157 LRNNQIKSIGVHVFRYMPTLKMLDLSGNNMTRL 189
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.3
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +1
Query: 319 ITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKIT 498
+T L L + L+ L + ++L L++N+L LP L L ++TLDL N
Sbjct: 98 LTELFLYKNKLTCLPTEIGQLVNLKK-LGLSENALTSLPDS-LASLESLETLDLRHN--- 152
Query: 499 KLTEKISGIFKNWSICWSLTIKYSEI 576
KLTE S I+K S+ +L ++Y+ I
Sbjct: 153 KLTEVPSVIYKIGSL-ETLWLRYNRI 177
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 29.5 bits (63), Expect = 2.3
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +1
Query: 319 ITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKIT 498
+T L L + L+ L + ++L L++N+L LP L L ++TLDL N
Sbjct: 97 LTELFLYKNKLTCLPTEIGQLVNLKK-LGLSENALTSLPDS-LASLESLETLDLRHN--- 151
Query: 499 KLTEKISGIFKNWSICWSLTIKYSEI 576
KLTE S I+K S+ +L ++Y+ I
Sbjct: 152 KLTEVPSVIYKIGSL-ETLWLRYNRI 176
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.3
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +1
Query: 319 ITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKIT 498
+T L L + L+ L + ++L L++N+L LP L L ++TLDL N
Sbjct: 98 LTELFLYKNKLTCLPTEIGQLVNLKK-LGLSENALTSLPDS-LASLESLETLDLRHN--- 152
Query: 499 KLTEKISGIFKNWSICWSLTIKYSEI 576
KLTE S I+K S+ +L ++Y+ I
Sbjct: 153 KLTEVPSVIYKIGSL-ETLWLRYNRI 177
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.3
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +1
Query: 319 ITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKIT 498
+T L L + L+ L + ++L L++N+L LP L L ++TLDL N
Sbjct: 98 LTELFLYKNKLTCLPTEIGQLVNLKK-LGLSENALTSLPDS-LASLESLETLDLRHN--- 152
Query: 499 KLTEKISGIFKNWSICWSLTIKYSEI 576
KLTE S I+K S+ +L ++Y+ I
Sbjct: 153 KLTEVPSVIYKIGSL-ETLWLRYNRI 177
>AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical
protein Y9C9A.16 protein.
Length = 392
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 647 VQCVLIY*FPRCTCFNPLGNASFSISEYLIVSDQQMLQFLNIPEIFSV 504
++ L++ P CT PL ++ F+ + D Q LQ N P +F V
Sbjct: 287 IEFSLLHISPPCTAPEPLRSSHFADKTGFMDVDPQTLQSKNYPNVFGV 334
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 316 SITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNK 492
S+ L+L ++++ + + ++ + +++ N L LP ++ LP+VKT D+ N+
Sbjct: 357 SLIHLELAYNHIKFIPVQLPSRYYHLISLNISGNELTYLPDNINTLLPNVKTFDITANR 415
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 406 LADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEK 513
L N + +P H ++L ++ LDL +N IT++ K
Sbjct: 294 LEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPK 329
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 328 LKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKI 495
L L+ ++++ + + F KL + L DN L VL +++ LDL N I
Sbjct: 542 LDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNI 597
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 415 NSLPELPRHVLQHLPHVKTLDLCRNKITKLTEKISGIFKNWSICWSLTIKYSEI 576
N + E+P H L L + LDL N++ L + F N + +L I Y+++
Sbjct: 714 NYINEIPAHDLNRLYSLTKLDLSHNRLISLE---NNTFSNLTRLSTLIISYNKL 764
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 406 LADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEK 513
L N + +P H ++L ++ LDL +N IT++ K
Sbjct: 294 LEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPK 329
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 328 LKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKI 495
L L+ ++++ + + F KL + L DN L VL +++ LDL N I
Sbjct: 542 LDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNI 597
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 415 NSLPELPRHVLQHLPHVKTLDLCRNKITKLTEKISGIFKNWSICWSLTIKYSEI 576
N + E+P H L L + LDL N++ L + F N + +L I Y+++
Sbjct: 714 NYINEIPAHDLNRLYSLTKLDLSHNRLISLE---NNTFSNLTRLSTLIISYNKL 764
>U88184-9|ABC71833.1| 843|Caenorhabditis elegans Hypothetical
protein F36H5.3b protein.
Length = 843
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 505 TEKISGIF-KNWSICWSLTIKYSEIEKD 585
T++++ IF K ICW+ T+ + ++EKD
Sbjct: 775 TDRVTHIFEKPEGICWTKTLNWQDMEKD 802
>Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical
protein F07A11.2b protein.
Length = 712
Score = 27.9 bits (59), Expect = 7.1
Identities = 27/90 (30%), Positives = 43/90 (47%)
Frame = +1
Query: 307 LGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCR 486
L L + L L+ D +S+ K + +++D A N LPEL R VLQ K LD+ +
Sbjct: 513 LSLLMFALTLSDDRISMAKR----REEIID----ALNDLPELIREVLQ--LDEKVLDIAK 562
Query: 487 NKITKLTEKISGIFKNWSICWSLTIKYSEI 576
+ + I G N++ C +K E+
Sbjct: 563 QIYKEKSLLIMGRGLNFATCLEGALKIKEL 592
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 27.9 bits (59), Expect = 7.1
Identities = 27/90 (30%), Positives = 43/90 (47%)
Frame = +1
Query: 307 LGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCR 486
L L + L L+ D +S+ K + +++D A N LPEL R VLQ K LD+ +
Sbjct: 526 LSLLMFALTLSDDRISMAKR----REEIID----ALNDLPELIREVLQ--LDEKVLDIAK 575
Query: 487 NKITKLTEKISGIFKNWSICWSLTIKYSEI 576
+ + I G N++ C +K E+
Sbjct: 576 QIYKEKSLLIMGRGLNFATCLEGALKIKEL 605
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 140 RREDTGTGTVLVVCQRINA-----YEEIARALTNKFSTETKIGRTSLTRNFRI 283
RR D ++VV + + YEE A+A TN+ S++ + S N RI
Sbjct: 115 RRSDLNELPIVVVGNKCDVENKKIYEETAKAFTNRLSSDVRYIEVSAKDNIRI 167
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +1
Query: 331 KLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTE 510
K NFD+L E V+ L+L+ ++ LP+ + ++ + DLC TK+ +
Sbjct: 273 KWNFDDLL---EKVWEYLNLIRIYTKPKGQLPDYSQPIVLNAERKSIEDLC----TKIHK 325
Query: 511 KISGIFKNWSICWSLTIKYS 570
+ FK ++ W + K++
Sbjct: 326 SLQKDFK-CALVWGASAKHN 344
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 203 LHKR*CVDRLPRQCRCRCPHVGRC 132
L+KR CVD L RC H+G C
Sbjct: 477 LYKRNCVDFLEEWWRCEPSHLGFC 500
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +1
Query: 331 KLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTE 510
K NFD+L E V+ L+L+ ++ LP+ + ++ + DLC TK+ +
Sbjct: 273 KWNFDDLL---EKVWEYLNLIRIYTKPKGQLPDYSQPIVLNAERKSIEDLC----TKIHK 325
Query: 511 KISGIFKNWSICWSLTIKYS 570
+ FK ++ W + K++
Sbjct: 326 SLQKDFK-CALVWGASAKHN 344
>AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical
protein F40G9.1 protein.
Length = 636
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 397 YFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEKISGIFKNWSIC 546
+F+ SLP L +L D R + LTEKI +F N IC
Sbjct: 376 HFAAVGGSLPLLQFAILNDPEMAHKTDDVRVGMWNLTEKIENLFFNRKIC 425
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,560,472
Number of Sequences: 27780
Number of extensions: 297826
Number of successful extensions: 874
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -