Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060463.seq
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.3  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 58  IINSDHSKITLNTKNVFIECTATDLTKAIVVLDTVVS 168
           I  ++++ + +N + +FIEC        IV L T ++
Sbjct: 76  IATNENNSLVINKRLIFIECFVMMALTLIVTLFTFLA 112


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 58  IINSDHSKITLNTKNVFIECTATDLTKAIVVLDTVVS 168
           I  ++++ + +N + +FIEC        IV L T ++
Sbjct: 76  IATNENNSLVINKRLIFIECFVMMALTLIVTLFTFLA 112


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 72  ITINYWRHRQ 43
           +T+NY+RH+Q
Sbjct: 397 VTVNYYRHKQ 406


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 667 GKHLAIFKHPNFPXEYV 617
           G H  IF  PNF  EYV
Sbjct: 156 GWHTYIFDVPNFVNEYV 172


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 203 YNNVKFSLLMELTNCIPTSI 262
           Y NVK  +L +L   IPT +
Sbjct: 256 YGNVKIPVLCKLIQSIPTHL 275


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 220 FSPDGTYELYPN 255
           +SPD  +E YPN
Sbjct: 78  YSPDNHFEQYPN 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,464
Number of Sequences: 336
Number of extensions: 2701
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)