Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060463.seq
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052086-1|AAK93510.1|  589|Drosophila melanogaster SD03863p pro...   107   1e-23
AE014297-3508|AAF56268.1|  589|Drosophila melanogaster CG5706-PA...   107   1e-23
BT023113-1|AAY55529.1|  423|Drosophila melanogaster IP03677p pro...    29   4.4  
AY231149-1|AAP69665.1|  584|Drosophila melanogaster CCK-like rec...    29   4.4  
AE014298-2762|AAF48879.2|  598|Drosophila melanogaster CG32540-P...    29   4.4  

>AY052086-1|AAK93510.1|  589|Drosophila melanogaster SD03863p
           protein.
          Length = 589

 Score =  107 bits (257), Expect = 1e-23
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +1

Query: 40  LLSMPPIINSDHSKITLNTKNVFIECTATDLTKAIVVLDTVVSMFSKYCTNEYEVQQCKV 219
           +LS+PPIIN DHSKITL TKNVFIECTATD TKA VVLDT+V +FS++C  ++ V+ C V
Sbjct: 230 VLSLPPIINGDHSKITLKTKNVFIECTATDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDV 289

Query: 220 FSPDGTYELYPNFNIEKNLLMLIKPTTILG 309
             PDG+   YP   + +  + + +    +G
Sbjct: 290 VQPDGSVISYPELEVREERISVKRANAYIG 319



 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = +3

Query: 252 QLQYREELINVDKANNYIGISEEGDKLASLLSRMCLQTAHEGSVLRVRVPPTRHDVIHA 428
           +L+ REE I+V +AN YIGI E  +KLA +L+RM L+   +G  L V++PPTRHDVIHA
Sbjct: 301 ELEVREERISVKRANAYIGIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPTRHDVIHA 359



 Score = 33.1 bits (72), Expect = 0.35
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +2

Query: 431 DLYEDIAIAYGYNRIAR 481
           D+YED+AIAYGYN I +
Sbjct: 361 DIYEDVAIAYGYNNIKK 377


>AE014297-3508|AAF56268.1|  589|Drosophila melanogaster CG5706-PA
           protein.
          Length = 589

 Score =  107 bits (257), Expect = 1e-23
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +1

Query: 40  LLSMPPIINSDHSKITLNTKNVFIECTATDLTKAIVVLDTVVSMFSKYCTNEYEVQQCKV 219
           +LS+PPIIN DHSKITL TKNVFIECTATD TKA VVLDT+V +FS++C  ++ V+ C V
Sbjct: 230 VLSLPPIINGDHSKITLKTKNVFIECTATDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDV 289

Query: 220 FSPDGTYELYPNFNIEKNLLMLIKPTTILG 309
             PDG+   YP   + +  + + +    +G
Sbjct: 290 VQPDGSVISYPELEVREERISVKRANAYIG 319



 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = +3

Query: 252 QLQYREELINVDKANNYIGISEEGDKLASLLSRMCLQTAHEGSVLRVRVPPTRHDVIHA 428
           +L+ REE I+V +AN YIGI E  +KLA +L+RM L+   +G  L V++PPTRHDVIHA
Sbjct: 301 ELEVREERISVKRANAYIGIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPTRHDVIHA 359



 Score = 33.1 bits (72), Expect = 0.35
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +2

Query: 431 DLYEDIAIAYGYNRIAR 481
           D+YED+AIAYGYN I +
Sbjct: 361 DIYEDVAIAYGYNNIKK 377


>BT023113-1|AAY55529.1|  423|Drosophila melanogaster IP03677p
           protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 157 TVVSMFSKYC-TNEYEVQQCKVFSPDGTYELYPNFNIEKNLLMLIKPTTIL 306
           T +++FS+   T+     +C+ F PD  YEL+  +NI  + L+L+ P  +L
Sbjct: 137 TPIAVFSQLIPTSRPGYCKCREFWPDQGYELF--YNILLDFLLLVLPLLVL 185


>AY231149-1|AAP69665.1|  584|Drosophila melanogaster CCK-like
           receptor protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 157 TVVSMFSKYC-TNEYEVQQCKVFSPDGTYELYPNFNIEKNLLMLIKPTTIL 306
           T +++FS+   T+     +C+ F PD  YEL+  +NI  + L+L+ P  +L
Sbjct: 244 TPIAVFSQLIPTSRPGYCKCREFWPDQGYELF--YNILLDFLLLVLPLLVL 292


>AE014298-2762|AAF48879.2|  598|Drosophila melanogaster CG32540-PA
           protein.
          Length = 598

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 157 TVVSMFSKYC-TNEYEVQQCKVFSPDGTYELYPNFNIEKNLLMLIKPTTIL 306
           T +++FS+   T+     +C+ F PD  YEL+  +NI  + L+L+ P  +L
Sbjct: 244 TPIAVFSQLIPTSRPGYCKCREFWPDQGYELF--YNILLDFLLLVLPLLVL 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,460,389
Number of Sequences: 53049
Number of extensions: 491504
Number of successful extensions: 1183
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)