Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060462.seq
(558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 210 6e-55
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 210 6e-55
SB_56| Best HMM Match : Actin (HMM E-Value=0) 210 6e-55
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 210 6e-55
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 210 6e-55
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 1e-27
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_54| Best HMM Match : Actin (HMM E-Value=0) 107 6e-24
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 93 1e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 81 8e-16
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 63 2e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 47 1e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.001
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.48
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.48
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 30 1.1
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 1.5
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.5
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.5
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 1.9
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 1.9
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 1.9
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.6
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 29 3.4
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 4.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 210 bits (513), Expect = 6e-55
Identities = 97/101 (96%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN+ AMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Score = 117 bits (282), Expect = 6e-27
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 210 bits (513), Expect = 6e-55
Identities = 97/101 (96%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN+ AMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
Score = 114 bits (275), Expect = 4e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 210 bits (513), Expect = 6e-55
Identities = 97/101 (96%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN+ AMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
Score = 116 bits (278), Expect = 2e-26
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 210 bits (513), Expect = 6e-55
Identities = 97/101 (96%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN+ AMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Score = 122 bits (293), Expect = 3e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 210 bits (513), Expect = 6e-55
Identities = 97/101 (96%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN+ AMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Score = 117 bits (282), Expect = 6e-27
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 119 bits (287), Expect = 1e-27
Identities = 55/117 (47%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Frame = +2
Query: 209 SGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 385
S + G + L+ +EA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 386 EHPVLLTEAPLNPKANREKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSG
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSG 160
Score = 44.4 bits (100), Expect = 6e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 105 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 116 bits (278), Expect = 2e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +2
Query: 431 NREKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
N + M +IMFETFN+ AMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 119
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 358
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 107 bits (257), Expect = 6e-24
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = +2
Query: 338 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTXAMYVAIQAVLSLY 517
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 518 ASGRTTGIVLDSG 556
ASGRTTG V D G
Sbjct: 2189 ASGRTTGTVFDCG 2201
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 93.5 bits (222), Expect = 1e-19
Identities = 39/57 (68%), Positives = 51/57 (89%)
Frame = +2
Query: 386 EHPVLLTEAPLNPKANREKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
+HPVLLTEAPLNP+ NREK ++ FETFN A+++++QAVLSLYA+GRTTG+VLD+G
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAG 182
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 80.6 bits (190), Expect = 8e-16
Identities = 33/87 (37%), Positives = 58/87 (66%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 475
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 476 XAMYVAIQAVLSLYASGRTTGIVLDSG 556
A ++ +VL+ +A+GR+ G+V+DSG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +2
Query: 452 IMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
IMFE FN+ A+YVAIQAVLSLYASGRTTG+V DSG
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSG 35
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 81 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 227
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2
Query: 497 QAVLSLYASGRTTGIVLDSG 556
Q LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 403
+EA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 209 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 93
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 341 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTXAMYVAIQAVLSLYA 520
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 521 SGRTTGIV 544
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.3 bits (80), Expect = 0.017
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 382
GR G + GL N+ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 383 EEHPVLLTEAPLNPKANRE 439
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 428 ANREKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIV 544
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = -1
Query: 516 YSXSTAWMATYMAXVLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATRSSL*KV*CQIF 337
Y S +W+ VL N ++++F +LGL A + T C T +L + +
Sbjct: 31 YKTSGSWIRI-CDIVLLAPNAMFMVFLFYSLGLAHAKLVGTRCPIVKTIYTLLLLYGIHY 89
Query: 336 SMSSQLVTIPCSMGYLRVRIPLLLCASFL 250
+++SQ+ + C + R +LL ASF+
Sbjct: 90 TLNSQVFAV-CVVSVARCFASMLLTASFI 117
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 179 VPLDRGKAPPSGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 352
V L + +GR+ G+ +CR +A ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 353 TFYN 364
T N
Sbjct: 497 TCPN 500
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNE 367
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 99 EVAALVVDNGSGMCKAGFAGDDAPRAV 179
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1644
Score = 29.1 bits (62), Expect = 2.6
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 221 GRYGTEGLLCRNEA-QSKRGILTLKYPIEHGIVTNWDDMEK-IWHHTFYNELRVAPEEHP 394
G T+ ++ RNEA Q + L L +P H WD++ K ++ + E+ + P P
Sbjct: 112 GIQDTDAVIGRNEALQQTKQYLQL-FPNLHNREQYWDELAKEVYRYIGNKEVPLLPVHRP 170
Query: 395 VLLTEAPLNPKANREKMTQIMFETF 469
V E+ K E+ +++ E F
Sbjct: 171 V-EDESASEKKEKDEQASRVKIEWF 194
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 318 VTIPCSMGYLRVRIPLLLCASFLHKSPSVP 229
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 391 PSPAH*GSPQPQGQ---QREDDPDHVRNIQHXRHVRXHPSRAXAVRVRSYHRYRAGLRA 558
P A +P+PQ + Q +PDHVR + V SR+ V R+Y R +RA
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPRTYEQVRA 762
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 390 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASFL--HKSPSVPYRPS 217
CS + + C + ++V CS + V + ++C+ H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 216 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 124
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 412 SPQPQGQQREDDPDHVRNIQHXRHVRXHPSR 504
SP P+ R D+P V HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 199 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 89
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 255 FLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 91
+L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 133 YLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -1
Query: 330 SSQLVTI--PCSMGYLRV-RIPLLLCASFLHKSPSVPYRP 220
S LV++ P S Y + RIP LC L PS PY+P
Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,764,455
Number of Sequences: 59808
Number of extensions: 469552
Number of successful extensions: 1370
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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