Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060462.seq
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 213 1e-55
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 213 1e-55
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 212 1e-55
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 212 1e-55
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 212 1e-55
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 212 1e-55
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 212 1e-55
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 212 1e-55
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 212 1e-55
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 212 1e-55
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 207 4e-54
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 149 1e-36
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 123 1e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 123 1e-28
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 123 1e-28
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 122 2e-28
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 122 2e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 102 2e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 88 3e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 39 0.003
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 39 0.003
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 34 0.060
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 30 0.98
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.2
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.9
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 213 bits (519), Expect = 1e-55
Identities = 99/101 (98%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
Score = 122 bits (293), Expect = 2e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 213 bits (519), Expect = 1e-55
Identities = 99/101 (98%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
Score = 120 bits (289), Expect = 7e-28
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 212 bits (518), Expect = 1e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 212 bits (518), Expect = 1e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 212 bits (518), Expect = 1e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 212 bits (518), Expect = 1e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 212 bits (518), Expect = 1e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 212 bits (518), Expect = 1e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 72
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 73 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 113
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 219 MVGMGQKDSYVGMRHRAK 272
MVGMGQKDSYVG ++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 212 bits (518), Expect = 1e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 102
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 103 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 143
Score = 84.6 bits (200), Expect = 4e-17
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +3
Query: 141 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 212 bits (518), Expect = 1e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 207 bits (506), Expect = 4e-54
Identities = 95/101 (94%), Positives = 99/101 (98%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+N
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSN 115
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYV IQAVLSLYASGRTTGIVLD+G
Sbjct: 116 REKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTG 156
Score = 116 bits (280), Expect = 9e-27
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 149 bits (361), Expect = 1e-36
Identities = 64/101 (63%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Frame = +2
Query: 257 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKAN 433
+A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP N
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
RE+ +I FETFN A+Y+ +QAVLSLYA+GRTTG+VLDSG
Sbjct: 120 RERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSG 160
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIG 58
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 123 bits (296), Expect = 1e-28
Identities = 58/115 (50%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
Frame = +2
Query: 215 RDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 391
R G + L+ E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 392 PVLLTEAPLNPKANREKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
+LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA G TG+V+DSG
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSG 160
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKI 343
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKI 343
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 122 bits (293), Expect = 2e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKI 343
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 122 bits (293), Expect = 2e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 60.9 bits (141), Expect = 6e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDM 334
+EAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 102 bits (245), Expect = 2e-22
Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 8/99 (8%)
Frame = +2
Query: 284 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 463
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 464 TFNTXAMYVAIQAVLSLYASGRT--------TGIVLDSG 556
+FN +Y+A+QAVL+L AS + TG+V+DSG
Sbjct: 140 SFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSG 178
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 194
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +2
Query: 299 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTX 478
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 479 AMYVAIQAVLSLYASGRTTGIVLDSG 556
A Y++ VLS +A GRT G+++DSG
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSG 179
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 194
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 475
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 476 XAMYVAIQAVLSLYASGRTT----GIVLDSG 556
++ + L S + +V+DSG
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 475
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 476 XAMYVAIQAVLSLYASGRTT----GIVLDSG 556
++ + L S + +V+DSG
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 34.3 bits (75), Expect = 0.060
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2
Query: 365 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIV 544
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 545 LDSG 556
+D G
Sbjct: 326 VDIG 329
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 191 RGKAPPSGRDGRYGTEGLLCRNEAQSKRG 277
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -1
Query: 348 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASFLHKSPSVPYRPSRPDG 205
CQ+FS QLVT+ SMG +++++ L L AS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 141 KAGFAGDDAPRAVFPSIVGRPRHQG 215
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 166 ASSPAKPALHIPEPLSTTNAATSS 95
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 370 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 471
AC GT SPA GSP PQ D + N Q
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1263
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 166 ASSPAKPALHIPEPLSTTNAATSS 95
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 370 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 471
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 166 ASSPAKPALHIPEPLSTTNAATSS 95
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 370 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 471
AC GT SPA GSP PQ D + N Q
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1264
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 166 ASSPAKPALHIPEPLSTTNAATSS 95
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 370 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 471
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 293 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 394
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 293 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 394
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,908,097
Number of Sequences: 27780
Number of extensions: 320409
Number of successful extensions: 1229
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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