Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060462.seq
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 211 3e-55
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 210 4e-55
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 210 4e-55
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 209 1e-54
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 208 1e-54
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 208 1e-54
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 208 1e-54
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 208 2e-54
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 208 2e-54
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 189 9e-49
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 178 2e-45
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 174 4e-44
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 124 4e-29
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 97 9e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 93 1e-19
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 78 3e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 1e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 59 2e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 1e-05
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 38 0.006
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 38 0.006
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.074
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 29 2.8
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.8
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 28 4.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.4
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 8.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.5
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 27 8.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 211 bits (515), Expect = 3e-55
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 210 bits (514), Expect = 4e-55
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 210 bits (514), Expect = 4e-55
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFNT AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 209 bits (510), Expect = 1e-54
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 208 bits (509), Expect = 1e-54
Identities = 95/101 (94%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN+ AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 208 bits (509), Expect = 1e-54
Identities = 95/101 (94%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN+ AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 208 bits (509), Expect = 1e-54
Identities = 95/101 (94%), Positives = 100/101 (99%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN+ AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 208 bits (508), Expect = 2e-54
Identities = 96/101 (95%), Positives = 98/101 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 208 bits (508), Expect = 2e-54
Identities = 96/101 (95%), Positives = 98/101 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFETFN AMYVAIQAVLSLYASGRTTGIVLDSG
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 189 bits (461), Expect = 9e-49
Identities = 83/101 (82%), Positives = 95/101 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK N
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
Query: 434 REKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
REKMTQIMFE+F +MY+ IQAVLSLY+SGRTTGIVLDSG
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSG 159
Score = 94.3 bits (224), Expect = 5e-20
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 178 bits (434), Expect = 2e-45
Identities = 79/105 (75%), Positives = 94/105 (89%)
Frame = +2
Query: 242 LLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 421
L ++A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 422 PKANREKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
PKA+REKMTQIMFETF +MY+ +QA LSL+ASGRTTG VLDSG
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSG 113
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 174 bits (423), Expect = 4e-44
Identities = 82/114 (71%), Positives = 93/114 (81%)
Frame = +2
Query: 215 RDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 394
RDG E + E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
VLLTEAP NPKANREKMTQIMFE+F+ AMYV++Q+VL LY+SGRTTG+VLD G
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLG 147
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVG 46
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 124 bits (299), Expect = 4e-29
Identities = 51/92 (55%), Positives = 68/92 (73%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 460
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 461 ETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
E +N +++ IQAVL+LYA G TG+V+DSG
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSG 157
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVG 254
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVG 56
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 96.7 bits (230), Expect = 9e-21
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
Frame = +2
Query: 287 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 466
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 467 FNTXAMYVAIQAVLSLYASGRT-----TGIVLDSG 556
FN +Y+A+ +VL+L A T TG+V+D G
Sbjct: 146 FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVG 180
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 108 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 194
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/96 (41%), Positives = 63/96 (65%)
Frame = +2
Query: 269 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 448
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 449 QIMFETFNTXAMYVAIQAVLSLYASGRTTGIVLDSG 556
++MFE + A+++A VL+ +A+GR T +V+D G
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCG 180
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 197
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 78.2 bits (184), Expect = 3e-15
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 472
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 473 TXAMYVAIQAVLSLYASGRTTGIVLDSG 556
Y + QAVLSLYA GR +G +D G
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIG 144
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 200
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 269 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 197
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +2
Query: 287 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 466
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 467 FNTXAMYVA-IQAVLSLYASGRTTGIVL 547
F ++Y+A Q+++ LY + R +L
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSIL 148
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 472
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 473 TXAMYVAIQAVLSLYASGRTTGIVLDSG 556
A+ + A S Y + GI G
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGICKKDG 171
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Frame = +2
Query: 353 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTXAMYVAIQA 502
T + ++V P P++++ PL + KA+R ++ +F N A+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 503 VLSLYASGRTTGIVLDSG 556
VL+LYA+ RT+GIV++ G
Sbjct: 241 VLALYAARRTSGIVVNIG 258
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Frame = +2
Query: 353 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTXAMYVAIQA 502
T + ++V P P++++ PL + KA+R ++ +F N A+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 503 VLSLYASGRTTGIVLDSG 556
VL+LYA+ RT+GIV++ G
Sbjct: 241 VLALYAARRTSGIVVNIG 258
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.074
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 232 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 95
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 409 GSPQPQGQQREDDPDHVR---NIQHXRHVRXHPSRAXAVRVRSYHR 537
GSP+ +G + E+D D + NI+H + H + A SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +2
Query: 320 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTXAMYVAIQ 499
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 500 AVLSLYASGRTTGIVL 547
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 208 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 86
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 403 H*GSPQPQGQQREDDPDHVRN 465
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 320 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 469
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 185 LDRGKAPPSGRDGR--YGTEGLLCRNEAQSKRGILTLK 292
L+RG+ S R GR +G G R++AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSG--SRDKAQSRRSKISLK 461
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,342,338
Number of Sequences: 28952
Number of extensions: 304625
Number of successful extensions: 859
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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