Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060461.seq
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 38 0.006
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 38 0.006
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 38 0.006
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 38 0.006
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 37 0.008
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 37 0.011
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 34 0.079
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 33 0.18
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 33 0.18
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 31 0.56
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 31 0.56
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 31 0.74
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 31 0.74
Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical pr... 29 1.7
AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein. 29 1.7
AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeri... 29 1.7
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 29 1.7
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 29 1.7
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 29 1.7
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 29 1.7
Z75537-6|CAA99838.2| 348|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z75527-9|CAA99780.2| 348|Caenorhabditis elegans Hypothetical pr... 29 2.2
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 29 2.2
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 29 2.2
AY008135-1|AAG32088.1| 348|Caenorhabditis elegans heterotrimeri... 29 2.2
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 29 2.2
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 29 3.0
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 29 3.0
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 28 5.2
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 28 5.2
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 28 5.2
AF003145-8|AAB57721.2| 700|Caenorhabditis elegans Hypothetical ... 28 5.2
Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 27 6.9
U67955-3|AAO91745.1| 655|Caenorhabditis elegans Hypothetical pr... 27 6.9
U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical pr... 27 6.9
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 27 6.9
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 27 6.9
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 27 9.1
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 27 9.1
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 27 9.1
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 27 9.1
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 27 9.1
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 27 9.1
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 27 9.1
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 27 9.1
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 105 bits (252), Expect = 2e-23
Identities = 53/100 (53%), Positives = 66/100 (66%)
Frame = +3
Query: 255 TLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
TLLHMLKD R+AQHVPTLHPTS +S+G + FTT+DLGGH QARR +D FPAVDA+VFL
Sbjct: 36 TLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFL 95
Query: 435 VDACXPAXSAGVQG*TRLVAH*TRTSVTALWLXLGNKIDK 554
+D + + + + + L LGNKIDK
Sbjct: 96 IDVADAERMQESRVELESLLQDEQIASVPV-LILGNKIDK 134
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +1
Query: 157 FILDWFTGVLGFLGLWXKSGKLLFLGLDNAGKT 255
F+ DWF GVL LGL K GKL+FLGLDNAGKT
Sbjct: 3 FLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKT 35
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +3
Query: 222 LVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRD 401
L+ G + T+L+ L+ + +PT+ + +++F +DLGG R R
Sbjct: 20 LILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRC 79
Query: 402 XFPAVDAIVFLVDA 443
+ DAI+++VD+
Sbjct: 80 YYANTDAIIYVVDS 93
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 222 LVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRD 401
L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R R
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH 80
Query: 402 XFPAVDAIVFLVDA 443
F ++F+VD+
Sbjct: 81 YFQNTQGLIFVVDS 94
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 222 LVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRD 401
L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R R
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH 80
Query: 402 XFPAVDAIVFLVDA 443
F ++F+VD+
Sbjct: 81 YFQNTQGLIFVVDS 94
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 222 LVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRD 401
L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R R
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH 80
Query: 402 XFPAVDAIVFLVDA 443
F ++F+VD+
Sbjct: 81 YFQNTQGLIFVVDS 94
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ ++ +++F +D+GG + R
Sbjct: 12 KELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQDKIR 71
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R + A++F++DA
Sbjct: 72 PLWRHYYTGTQALIFVMDA 90
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 216 QALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXX 395
+ L+ G + T+L+ LK +PT+ ++ + T +D+GG ++ R
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALW 78
Query: 396 RDXFPAVDAIVFLVDA 443
+ FP +VF+VD+
Sbjct: 79 KYYFPNTTTLVFVVDS 94
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/84 (20%), Positives = 38/84 (45%)
Frame = +3
Query: 192 SWXMXKVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGG 371
SW + K + +V G + T+L+ + PT+ +S ++ F +D+GG
Sbjct: 11 SWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGG 70
Query: 372 HQQARRXXRDXFPAVDAIVFLVDA 443
+ R+ + D ++ ++D+
Sbjct: 71 QESLRKSWSTYYVQTDVVIVVIDS 94
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 33.9 bits (74), Expect = 0.079
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 222 LVSGX*QCREDTLLHMLK--DXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXX 395
+V G + T+L+ LK + R Q VPT+ S ++ F FD+ G + R
Sbjct: 21 VVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTW 80
Query: 396 RDXFPAVDAIVFLVDA 443
F + ++F++D+
Sbjct: 81 ESYFHSSQGVIFVLDS 96
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 163 LDWFTGVLGFLGLWXKSGKLLFLGLDNAGKT 255
+ +F+ + GL K ++ +GLDN+GKT
Sbjct: 1 MGFFSSLSSLFGLGKKDVNIVVVGLDNSGKT 31
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 276 DXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
D L +PT+ + I +F +D+GG + RR F V+A +F+
Sbjct: 174 DDMLRIRIPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFI 226
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 276 DXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
D L +PT+ + I +F +D+GG + RR F V+A +F+
Sbjct: 174 DDMLRIRIPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFI 226
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L VPT + + + F FD+GG + RR F V A++F+
Sbjct: 186 LKSRVPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFI 235
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L VPT + + + F FD+GG + RR F V A++F+
Sbjct: 186 LKSRVPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFI 235
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 30.7 bits (66), Expect = 0.74
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 165 RLVHWSVGISWXMXKVRQALVSGX*QCREDTLLHMLKDXRLAQH-VPTLHPTSXXLSIGS 341
+++ W + W ++ LV G + T ++++ + + +PT+ ++ G+
Sbjct: 7 KVLDWIRSLFWK-EEMELTLV-GLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGN 64
Query: 342 MRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDA 443
+ +D+GG + R V+AIVF+VDA
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDA 98
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +3
Query: 222 LVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRD 401
L+ G + TL+ D PTL + + +D+GG + R ++
Sbjct: 20 LILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKN 79
Query: 402 XFPAVDAIVFLVDA 443
F + DA++++VD+
Sbjct: 80 YFESTDALIWVVDS 93
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 30.7 bits (66), Expect = 0.74
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 165 RLVHWSVGISWXMXKVRQALVSGX*QCREDTLLHMLKDXRLAQH-VPTLHPTSXXLSIGS 341
+++ W + W ++ LV G + T ++++ + + +PT+ ++ G+
Sbjct: 7 KVLDWIRSLFWK-EEMELTLV-GLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGN 64
Query: 342 MRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDA 443
+ +D+GG + R V+AIVF+VDA
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDA 98
>Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical
protein C34D1.3 protein.
Length = 356
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein.
Length = 350
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein.
Length = 342
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L V T I + F FD+GG + RR F V++I+F+
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 333 IGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
+ +RF FD+GG + RR F V AI+F+
Sbjct: 195 VDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFV 228
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 333 IGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
+ +RF FD+GG + RR F V AI+F+
Sbjct: 195 VDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFV 228
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 333 IGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
+ +RF FD+GG + RR F V AI+F+
Sbjct: 195 VDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFV 228
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 333 IGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
+ +RF FD+GG + RR F V AI+F+
Sbjct: 195 VDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFV 228
>Z75537-6|CAA99838.2| 348|Caenorhabditis elegans Hypothetical
protein F18E2.5 protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 294 HVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
+VPT + + + F FD+GG + RR + +DAI F +
Sbjct: 179 YVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCI 226
>Z75527-9|CAA99780.2| 348|Caenorhabditis elegans Hypothetical
protein F18E2.5 protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 294 HVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
+VPT + + + F FD+GG + RR + +DAI F +
Sbjct: 179 YVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCI 226
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 333 IGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
I ++F FD+GG + R+ F V+AI+F+
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFI 227
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 333 IGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
I ++F FD+GG + R+ F V+AI+F+
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFI 227
>AY008135-1|AAG32088.1| 348|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 294 HVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
+VPT + + + F FD+GG + RR + +DAI F +
Sbjct: 179 YVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCI 226
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 333 IGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
I ++F FD+GG + R+ F V+AI+F+
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFI 227
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L + T + S+ F FD+GG + R+ F V+AI+F+
Sbjct: 176 LLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFEDVNAIIFI 225
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L + T + S+ F FD+GG + R+ F V+AI+F+
Sbjct: 176 LLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFEDVNAIIFI 225
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
L V T + ++ F FD+GG + R+ F V AI+F V
Sbjct: 176 LRTRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
L V T + ++ F FD+GG + R+ F V AI+F V
Sbjct: 176 LRTRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
L V T + ++ F FD+GG + R+ F V AI+F V
Sbjct: 176 LRTRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>AF003145-8|AAB57721.2| 700|Caenorhabditis elegans Hypothetical
protein B0414.8a protein.
Length = 700
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 210 VRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIG 338
V QAL S +C++ L+H + +L + P P+S S+G
Sbjct: 657 VDQALSSALKRCQDPVLVHPSRLAQLCEQPPANRPSSQASSLG 699
>Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L + T T + + F D+GG + R+ F V+AI+F+
Sbjct: 174 LRTRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDNVNAIIFI 223
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 305 SRYMLSKSXIFQHV*ECVFPALSXPRNKSLPDFXHXPRNPNTP 177
+ Y+ SKS HV E VF KS PD + TP
Sbjct: 188 NNYIQSKSFSHSHVVEIVFSIEPKTSKKSAPDIMEIASSSQTP 230
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 305 SRYMLSKSXIFQHV*ECVFPALSXPRNKSLPDFXHXPRNPNTP 177
+ Y+ SKS HV E VF KS PD + TP
Sbjct: 188 NNYIQSKSFSHSHVVEIVFSIEPKTSKKSAPDIMEIASSSQTP 230
>U67955-3|AAO91745.1| 655|Caenorhabditis elegans Hypothetical
protein C16H3.3b protein.
Length = 655
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 435 PGTLWRPPRGXSRATXDAPAD 373
PG +W PPRG +AT + D
Sbjct: 321 PGRVWCPPRGQCQATCEQVVD 341
>U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical
protein C16H3.3a protein.
Length = 791
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 435 PGTLWRPPRGXSRATXDAPAD 373
PG +W PPRG +AT + D
Sbjct: 457 PGRVWCPPRGQCQATCEQVVD 477
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
L + T T + + F D+GG + R+ F V+AI+F+
Sbjct: 174 LRTRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDNVNAIIFI 223
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +3
Query: 249 EDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTT-----FDLGGHQQARRXXRDXFPA 413
E T H +KD + P+ + L+ G++ +DLGG + R +
Sbjct: 35 EQTKSHFVKDYGVLN--PSKITATVGLNTGNVELNNTCLHFWDLGGQESLRELWATYYDD 92
Query: 414 VDAIVFLVDA 443
+A++F+VDA
Sbjct: 93 ANAMIFVVDA 102
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 342 MRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
M F D+GG + RR F VD I+F+V
Sbjct: 205 MDFKMVDVGGQRSERRKWIHCFDNVDMILFIV 236
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
L VPT + + F D+GG + RR F V +I+FLV
Sbjct: 176 LRVRVPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLV 226
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
L VPT + + F D+GG + RR F V +I+FLV
Sbjct: 176 LRVRVPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLV 226
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 342 MRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
M F D+GG + RR F VD I+F+V
Sbjct: 205 MDFKMVDVGGQRSERRKWIHCFDNVDMILFIV 236
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 348 FTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
F FD+GG + R+ F +V A++F V
Sbjct: 199 FKMFDVGGQRSERKKWIHCFDSVTAVIFCV 228
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 348 FTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
F FD+GG + R+ F +V A++F V
Sbjct: 199 FKMFDVGGQRSERKKWIHCFDSVTAVIFCV 228
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
L VPT + + F D+GG + RR F V +I+FLV
Sbjct: 124 LRVRVPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLV 174
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 285 LAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLV 437
L VPT + + F D+GG + RR F V +I+FLV
Sbjct: 176 LRVRVPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLV 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,398,170
Number of Sequences: 27780
Number of extensions: 178133
Number of successful extensions: 397
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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