Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060461.seq
(554 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical t... 96 2e-20
At3g62560.1 68416.m07028 GTP-binding protein, putative similar t... 96 2e-20
At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical t... 95 4e-20
At1g09180.1 68414.m01025 GTP-binding protein, putative strong si... 92 3e-19
At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identi... 42 3e-04
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 40 8e-04
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 38 0.003
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 38 0.003
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 38 0.003
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 38 0.003
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 38 0.003
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 38 0.003
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 38 0.003
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 38 0.003
At5g67560.1 68418.m08519 ADP-ribosylation factor, putative ident... 38 0.005
At3g49870.1 68416.m05452 ADP-ribosylation factor, putative simil... 38 0.005
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 37 0.010
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 36 0.018
At5g37680.1 68418.m04538 ADP-ribosylation factor, putative ADP-r... 33 0.13
At5g52210.2 68418.m06481 ADP-ribosylation factor, putative simil... 31 0.52
At5g52210.1 68418.m06480 ADP-ribosylation factor, putative simil... 31 0.52
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 30 1.2
At2g26310.1 68415.m03157 expressed protein 29 2.1
At5g05670.2 68418.m00624 expressed protein 27 6.4
At5g05670.1 68418.m00623 expressed protein 27 6.4
At1g77855.1 68414.m09073 hypothetical protein 27 8.4
>At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical to
SP:O04834 GTP-binding protein SAR1A. [Arabidopsis
thaliana]
Length = 193
Score = 95.9 bits (228), Expect = 2e-20
Identities = 58/132 (43%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Frame = +3
Query: 168 LVHWSVGISWXMX---KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIG 338
++ W G+ + K + L G + TLLHMLKD RL QH PT HPTS LSIG
Sbjct: 3 MIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 339 SMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDACXPAXSAGVQG*TRLVAH*TRTSVT 518
++F FDLGGHQ ARR +D + VDA+V+LVDA A + L A + S+
Sbjct: 63 KIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFA--ESKKELDALLSDESLA 120
Query: 519 AL-WLXLGNKID 551
++ +L LGNKID
Sbjct: 121 SVPFLILGNKID 132
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 154 MFILDWFTGVLGFLGLWXKSGKLLFLGLDNAGKT 255
MF++DWF GVL LGLW K K+LFLGLDNAGKT
Sbjct: 1 MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKT 34
>At3g62560.1 68416.m07028 GTP-binding protein, putative similar to
GTP-binding protein SAR1A (SP:O04834) [Arabidopsis
thaliana]; small GTP-binding protein Bsar1a - Brassica
campestris, EMBL:U55035
Length = 193
Score = 95.9 bits (228), Expect = 2e-20
Identities = 60/132 (45%), Positives = 75/132 (56%), Gaps = 4/132 (3%)
Frame = +3
Query: 168 LVHWSVGISWXMX---KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIG 338
LV W G+ + K + L G + TLLHMLKD RL QH PT HPTS LSIG
Sbjct: 3 LVDWFYGVLATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 339 SMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDACXPAXSAGVQG*TRLVAH*TRTSVT 518
++F FDLGGHQ ARR +D + VDA+V+LVDA A + L A + S+
Sbjct: 63 KIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFA--ESKKELDALLSDESLA 120
Query: 519 AL-WLXLGNKID 551
+ +L LGNKID
Sbjct: 121 NVPFLILGNKID 132
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 154 MFILDWFTGVLGFLGLWXKSGKLLFLGLDNAGKT 255
MF++DWF GVL LGLW K K+LFLGLDNAGKT
Sbjct: 1 MFLVDWFYGVLATLGLWQKEAKILFLGLDNAGKT 34
>At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical to
GTP-binding protein (SAR1B) [Arabidopsis thaliana]
SP:Q01474
Length = 193
Score = 94.7 bits (225), Expect = 4e-20
Identities = 54/115 (46%), Positives = 65/115 (56%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L G + TLLHMLKD RL QH PT HPTS LSIG ++F FDLGGHQ AR
Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIAR 78
Query: 387 RXXRDXFPAVDAIVFLVDACXPAXSAGVQG*TRLVAH*TRTSVTALWLXLGNKID 551
R +D + VDA+V+LVDA A + + T +L LGNKID
Sbjct: 79 RVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLS-DEALATVPFLILGNKID 132
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +1
Query: 154 MFILDWFTGVLGFLGLWXKSGKLLFLGLDNAGKT 255
MF+ DWF G+L LGLW K K+LFLGLDNAGKT
Sbjct: 1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKT 34
>At1g09180.1 68414.m01025 GTP-binding protein, putative strong
similarity to SP:Q01474 GTP-binding protein SAR1B and
SP:O04834 GTP-binding protein SAR1A [Arabidopsis
thaliana]
Length = 193
Score = 91.9 bits (218), Expect = 3e-19
Identities = 45/79 (56%), Positives = 52/79 (65%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L G + TLLHMLKD RL QH PT HPTS LSIG + F FDLGGHQ AR
Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIAR 78
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R +D + VDA+V+LVDA
Sbjct: 79 RVWKDCYAKVDAVVYLVDA 97
Score = 54.0 bits (124), Expect = 6e-08
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +1
Query: 154 MFILDWFTGVLGFLGLWXKSGKLLFLGLDNAGKT 255
MF+ DWF G+L LGL K K+LFLGLDNAGKT
Sbjct: 1 MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKT 34
>At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identical
to GP:453191 ADP-ribosylation factor 3 {Arabidopsis
thaliana}; contains domain PF00025: ADP-ribosylation
factor family
Length = 182
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + LV G + T+L+ L+ + +PT+ + +++F +DLGG R
Sbjct: 16 KEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R FP A++++VD+
Sbjct: 76 PYWRCYFPNTQAVIYVVDS 94
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
KVR +V G + T+L+ LK + VPT+ + + FT +D+GG ++ R
Sbjct: 17 KVRILMV-GLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
+ R F ++F+VD+
Sbjct: 76 KLWRHYFQNAQGLIFVVDS 94
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R F ++F+VD+
Sbjct: 76 PLWRHYFQNTQGLIFVVDS 94
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R F ++F+VD+
Sbjct: 76 PLWRHYFQNTQGLIFVVDS 94
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R F ++F+VD+
Sbjct: 76 PLWRHYFQNTQGLIFVVDS 94
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R F ++F+VD+
Sbjct: 76 PLWRHYFQNTQGLIFVVDS 94
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R F ++F+VD+
Sbjct: 76 PLWRHYFQNTQGLIFVVDS 94
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R F ++F+VD+
Sbjct: 76 PLWRHYFQNTQGLIFVVDS 94
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R F ++F+VD+
Sbjct: 76 PLWRHYFQNTQGLIFVVDS 94
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + L+ G + T+L+ LK + +PT+ + ++ FT +D+GG + R
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
R F ++F+VD+
Sbjct: 76 PLWRHYFQNTQGLIFVVDS 94
>At5g67560.1 68418.m08519 ADP-ribosylation factor, putative
identical to GP:15450888 ADP-ribosylation factor-like
protein {Arabidopsis thaliana]
Length = 184
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 VPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDACXPAXSAGVQG 476
+PT+ ++ GS+ +DLGG + R +V AIV++VDA P + +
Sbjct: 49 IPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRSVSAIVYVVDAADPDNLSVSK- 107
Query: 477 *TRLVAH*TRTSVTAL-WLXLGNKIDK 554
+ L ++TS+ + L LGNKIDK
Sbjct: 108 -SELHDLLSKTSLNGIPLLVLGNKIDK 133
>At3g49870.1 68416.m05452 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor-like protein 1 (SP:P40616)
[Homo sapiens]; ARF3 ADP-RIBOSYLATION FACTOR,GP:453191
Arabidopsis thaliana; contains domain PF00025:
ADP-ribosylation factor family
Length = 184
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 VPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDACXPAXSAGVQG 476
+PT+ ++ G++ +DLGG + R AV AIV++VDA P + +
Sbjct: 49 IPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSK- 107
Query: 477 *TRLVAH*TRTSVTAL-WLXLGNKIDK 554
+ L ++TS+ + L LGNKIDK
Sbjct: 108 -SELHDLLSKTSLNGIPLLVLGNKIDK 133
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 36.7 bits (81), Expect = 0.010
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 255 TLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
T+L+ L + VPT+ + ++ FT +D+GG ++ R R F D ++++
Sbjct: 32 TILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYV 91
Query: 435 VDA 443
VD+
Sbjct: 92 VDS 94
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 255 TLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFL 434
T+L+ L + VPT+ + ++ FT +D+GG ++ R R F D ++++
Sbjct: 32 TILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYV 91
Query: 435 VDA 443
VD+
Sbjct: 92 VDS 94
>At5g37680.1 68418.m04538 ADP-ribosylation factor, putative
ADP-ribosylation factor, Leishmania major, EMBL:LMFP1421
and ADP-ribosylation factor-like protein 1 (ARL1)
(SP:P40616) Homo sapiens; contains PF00025:
ADP-ribosylation factor family
Length = 184
Score = 33.1 bits (72), Expect = 0.13
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 VPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDACXPAXSAGVQG 476
+PT+ ++ G++ +DLGG ++ R V AIV+++DA S +
Sbjct: 49 IPTVGFNMRKVTKGNVTIKIWDLGGQRRFRTMWERYCRGVSAIVYVIDAA-DRDSVPISR 107
Query: 477 *TRLVAH*TRTSVTAL-WLXLGNKIDK 554
+ L T+ S+ + L LGNKIDK
Sbjct: 108 -SELNDLLTKPSLNGIPLLILGNKIDK 133
>At5g52210.2 68418.m06481 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 31.1 bits (67), Expect = 0.52
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 297 VPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDACXP 452
VPT+ + + + + +DLGG R + A+++L+DA P
Sbjct: 53 VPTVGLNIGRIEVSNAKIVFWDLGGQPGLRSIWEKYYEEAHALIYLIDAACP 104
>At5g52210.1 68418.m06480 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 31.1 bits (67), Expect = 0.52
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 297 VPTLHPTSXXLSIGSMRFTTFDLGGHQQARRXXRDXFPAVDAIVFLVDACXP 452
VPT+ + + + + +DLGG R + A+++L+DA P
Sbjct: 53 VPTVGLNIGRIEVSNAKIVFWDLGGQPGLRSIWEKYYEEAHALIYLIDAACP 104
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +3
Query: 207 KVRQALVSGX*QCREDTLLHMLKDXRLAQHVPTLHPTSXXLSIGSMRFTTFDLGGHQQAR 386
K + +V G + T L+ L + PT+ L ++RF +DLGG + R
Sbjct: 16 KEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLR 75
Query: 387 RXXRDXFPAVDAIVFLVDA 443
+ A++ ++D+
Sbjct: 76 TSWATYYRGTHAVIVVIDS 94
>At2g26310.1 68415.m03157 expressed protein
Length = 398
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 155 CLSS-TGSLECWDFLXYGKSQASSCFWXLTMQGRHTLTHV 271
C+S TG+L CW + + S W LT + R +L HV
Sbjct: 37 CISKFTGALLCWFSHGNLQKEVSKHQWGLTCKSRDSLKHV 76
>At5g05670.2 68418.m00624 expressed protein
Length = 260
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 360 DLGGHQQARRXXRDXFPAVDAIVFLVDA 443
D+ GH + R + P AIVF+VDA
Sbjct: 115 DVPGHSRLRPKLEEFLPQAAAIVFVVDA 142
>At5g05670.1 68418.m00623 expressed protein
Length = 260
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 360 DLGGHQQARRXXRDXFPAVDAIVFLVDA 443
D+ GH + R + P AIVF+VDA
Sbjct: 115 DVPGHSRLRPKLEEFLPQAAAIVFVVDA 142
>At1g77855.1 68414.m09073 hypothetical protein
Length = 317
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 95 EFSRLFVICYVVKWIISLANDYCDETVNL 9
E S+L+ +C+V+K IS +C +++
Sbjct: 74 ETSKLWDVCHVIKSAISTIESFCSSAISI 102
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,749,004
Number of Sequences: 28952
Number of extensions: 162008
Number of successful extensions: 349
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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