Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060460.seq
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   0.67 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   4.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   8.2  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 613 NWLAKFWVQNWGW 651
           NWL+ FW   W W
Sbjct: 163 NWLSVFWGSAWQW 175


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 307 LYNFFRSVFFRIEH 266
           +Y+FF+   FRI+H
Sbjct: 337 IYDFFKDSSFRIQH 350


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 61  IHENKLS-T*VTQNLI*RLK*DSILIGISCFLY*NS*QQRRHMTSQSS 201
           +HE +   T + QN+I  +K D +L     +LY N+       T  S+
Sbjct: 348 VHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSA 395


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 61  IHENKLS-T*VTQNLI*RLK*DSILIGISCFLY*NS*QQRRHMTSQSS 201
           +HE +   T + QN+I  +K D +L     +LY N+       T  S+
Sbjct: 386 VHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSA 433


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 545 YLYFWSTGDVAN*QELFVGSLG 610
           +L+ W   D+A   E F+G +G
Sbjct: 35  HLFEWKWNDIAKECEQFLGPVG 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,963
Number of Sequences: 438
Number of extensions: 3869
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)