Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060459.seq
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNE2 Cluster: Protein extra bases; n=13; Neoptera|Rep... 136 5e-31
UniRef50_Q7L1Q6 Cluster: Basic leucine zipper and W2 domain-cont... 103 5e-21
UniRef50_UPI000155D2EC Cluster: PREDICTED: similar to MSTP017; n... 99 9e-20
UniRef50_UPI0000504803 Cluster: similar to basic leucine zipper ... 93 4e-18
UniRef50_A2YZC2 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q5KI79 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A7PV62 Cluster: Chromosome chr4 scaffold_32, whole geno... 47 4e-04
UniRef50_Q9FG63 Cluster: Gb|AAD26879.1; n=10; Magnoliophyta|Rep:... 44 0.003
UniRef50_A2FU78 Cluster: Dynein heavy chain family protein; n=1;... 38 0.23
UniRef50_Q2J707 Cluster: Phage integrase; n=4; Actinomycetales|R... 36 0.92
UniRef50_UPI0000E47FEE Cluster: PREDICTED: similar to guanine nu... 35 1.6
UniRef50_Q7QYE0 Cluster: GLP_162_45192_43960; n=1; Giardia lambl... 35 1.6
UniRef50_UPI0000EBE1D4 Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_Q9JMW6 Cluster: Putative uncharacterized protein orf235... 33 4.9
UniRef50_A1FXQ0 Cluster: Beta-lactamase-like; n=11; Gammaproteob... 33 4.9
UniRef50_Q5ZC39 Cluster: CRK1 protein-like; n=2; Oryza sativa (j... 33 4.9
UniRef50_Q65XX2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q5B1T9 Cluster: Autophagy-related protein 2; n=1; Emeri... 33 4.9
UniRef50_A2BDP0 Cluster: Cofactor required for Sp1 transcription... 33 6.5
UniRef50_Q0J4K5 Cluster: Os08g0508500 protein; n=7; Oryza sativa... 33 6.5
UniRef50_A2E241 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q83FY7 Cluster: 50S ribosomal protein L4; n=2; Trophery... 33 6.5
UniRef50_UPI0000E471B7 Cluster: PREDICTED: similar to topoisomer... 33 8.6
UniRef50_Q9W0L2 Cluster: CG13908-PA; n=4; Sophophora|Rep: CG1390... 33 8.6
UniRef50_Q9VCS4 Cluster: CG6688-PA; n=2; Sophophora|Rep: CG6688-... 33 8.6
>UniRef50_Q9VNE2 Cluster: Protein extra bases; n=13; Neoptera|Rep:
Protein extra bases - Drosophila melanogaster (Fruit
fly)
Length = 422
Score = 136 bits (329), Expect = 5e-31
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +2
Query: 257 EVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLXRRYKYLE 436
EV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL RRYKYLE
Sbjct: 67 EVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIRRYKYLE 126
Query: 437 KMFEEEMKKVLVYLKGFDPEQRIK 508
KMFEEEM KVL+++KGF P +RIK
Sbjct: 127 KMFEEEMGKVLLFVKGFTPSERIK 150
Score = 112 bits (269), Expect = 9e-24
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = +3
Query: 60 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVXGLERAGGDLDAAYKYLDSAGSKL 239
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 240 DYRRYAK 260
DYRRY +
Sbjct: 61 DYRRYGE 67
>UniRef50_Q7L1Q6 Cluster: Basic leucine zipper and W2
domain-containing protein 1; n=78; Eumetazoa|Rep: Basic
leucine zipper and W2 domain-containing protein 1 - Homo
sapiens (Human)
Length = 419
Score = 103 bits (246), Expect = 5e-21
Identities = 46/84 (54%), Positives = 66/84 (78%)
Frame = +2
Query: 257 EVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLXRRYKYLE 436
E +FD+L+AGG+L PGG+++ D +T+ C+F+A ED++TM+ F QVF KL RRYKYLE
Sbjct: 68 ETLFDILVAGGMLAPGGTLADD--MMRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLE 125
Query: 437 KMFEEEMKKVLVYLKGFDPEQRIK 508
K FE+E+KK+L++LKGF +R K
Sbjct: 126 KGFEDEVKKLLLFLKGFSESERNK 149
Score = 94.7 bits (225), Expect = 2e-18
Identities = 40/67 (59%), Positives = 54/67 (80%)
Frame = +3
Query: 63 SQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVXGLERAGGDLDAAYKYLDSAGSKLD 242
+QK +KP LSGQR KTRKRDEKE++DP F+D ++ GL G DL+A K+LD++G+KLD
Sbjct: 3 NQKQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLD 62
Query: 243 YRRYAKS 263
YRRYA++
Sbjct: 63 YRRYAET 69
>UniRef50_UPI000155D2EC Cluster: PREDICTED: similar to MSTP017; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
MSTP017 - Ornithorhynchus anatinus
Length = 349
Score = 99.1 bits (236), Expect = 9e-20
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +3
Query: 69 KVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVXGLERAGGDLDAAYKYLDSAGSKLDYR 248
K +KPVL+GQR KTRKRDEKEK++P FRD+LV GL AGGDL+A K+LDS GS+LDYR
Sbjct: 3 KHQKPVLTGQRFKTRKRDEKEKFEPTVFRDSLVQGLNDAGGDLEAVAKFLDSTGSRLDYR 62
Query: 249 RYA 257
RYA
Sbjct: 63 RYA 65
Score = 98.3 bits (234), Expect = 2e-19
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = +2
Query: 257 EVIFDVLIAGGLLLPGGSVSMDGESPK-TNTCIFSANEDMDTMRNFEQVFVKLXRRYKYL 433
+ +FDVL+AG +L PGG+ DG+ K T C+FSA+ED D +RN+ QVF KL RRYKYL
Sbjct: 66 DTLFDVLVAGSMLAPGGTRIDDGDKTKMTKHCVFSADEDHDAIRNYAQVFNKLIRRYKYL 125
Query: 434 EKMFEEEMKKVLVYLKGF-DPEQ 499
EK FE+E+KK+L+Y F D EQ
Sbjct: 126 EKAFEDEIKKLLLYFNAFSDTEQ 148
>UniRef50_UPI0000504803 Cluster: similar to basic leucine zipper and
W2 domains 1 (LOC501543), mRNA; n=1; Rattus
norvegicus|Rep: similar to basic leucine zipper and W2
domains 1 (LOC501543), mRNA - Rattus norvegicus
Length = 346
Score = 93.5 bits (222), Expect = 4e-18
Identities = 45/86 (52%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 EVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLXRRYKYLE 436
E +FD+L+AGG++ PGG+++ D P T+ C+F+A ED++TM+ F QVF KL R YKYLE
Sbjct: 68 ETLFDILVAGGMVAPGGTLA-DDMMP-TDVCVFAAQEDLETMQAFAQVFNKLFRCYKYLE 125
Query: 437 KMFEEEMKK-VLVYLKGFDPEQRIKW 511
K F++E+KK +LV+LKGF +R K+
Sbjct: 126 KGFDDEVKKLLLVFLKGFSVSERNKF 151
Score = 81.4 bits (192), Expect = 2e-14
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = +3
Query: 66 QKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVXGLERAGGDLDAAYKYLDSAGSKLDY 245
QK +KP+L+GQR K RKRDEKE +DP F+D ++ GL G D +A K+LD++G+KLD+
Sbjct: 4 QKQQKPMLAGQRFKIRKRDEKETFDPTHFQDCIIEGLAETGTDFEAVAKFLDASGAKLDH 63
Query: 246 RRYAKS 263
YA++
Sbjct: 64 SSYAET 69
>UniRef50_A2YZC2 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 403
Score = 54.4 bits (125), Expect = 2e-06
Identities = 32/79 (40%), Positives = 44/79 (55%)
Frame = +3
Query: 30 LHNLLISIYCMSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVXGLERAGGDLDAAY 209
L +L +S+ C EKP L GQRIKTRKR+ DP F DA+V GDL+
Sbjct: 57 LSDLFVSLKCSK---EKPTLGGQRIKTRKRNIAAPLDPASFSDAIVQIYLDNAGDLELVA 113
Query: 210 KYLDSAGSKLDYRRYAKSY 266
K ++S S L++ RY ++
Sbjct: 114 KSIES--SDLNFSRYGDTF 130
>UniRef50_Q5KI79 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 432
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 EVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDM-DTMRNFEQVFVKLXRRYKYL 433
E +F++L GGLL PGGS D SP A + D ++ +V ++ +RYKYL
Sbjct: 83 EQLFELLFVGGLLQPGGSYLDDKRSPVYILQPDDAPDAFKDGVKGMIEVLKRVMQRYKYL 142
Query: 434 EKMFEEE-MKKVLVYLKGFDPEQRIK 508
+K EE + VL YL +D + R K
Sbjct: 143 QKPLEENFLPGVLSYLPKWDVKSREK 168
Score = 41.1 bits (92), Expect = 0.024
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 75 EKPVLSGQRIKTRKRDEK--EKYDPNGFRDALVXGLERAGGDL--DAAYKYLDSAGSKLD 242
+KP L+G RIK RK K K++P FRDAL+ L + DA L AGS L+
Sbjct: 18 KKPSLTGVRIKQRKGQAKATAKFEPEAFRDALLLHLALLPHPITKDALVAKLVQAGSTLE 77
Query: 243 YRRYAK 260
+ +Y++
Sbjct: 78 FLKYSE 83
>UniRef50_A7PV62 Cluster: Chromosome chr4 scaffold_32, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_32, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 237
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = +3
Query: 60 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVXGLERAGGDLDAAYKYLDSAGSKL 239
MS K E+P L G RIKTRKR+ DP F DA+V GDL+ K ++S S L
Sbjct: 164 MSSK-ERPTLGGTRIKTRKRNIAAPLDPATFADAVVQIYLDNAGDLELIAKSIES--SDL 220
Query: 240 DYRRYAKSY 266
++ RY ++
Sbjct: 221 NFSRYGDTF 229
>UniRef50_Q9FG63 Cluster: Gb|AAD26879.1; n=10; Magnoliophyta|Rep:
Gb|AAD26879.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 429
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = +3
Query: 57 CMSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVXGLERAGGDLDAAYKYLDSAGSK 236
C + + P LSG RIKTRKR+ DP F DA+V GDL+ K ++S S
Sbjct: 18 CSAARRRNP-LSGTRIKTRKRNIAAPLDPAAFSDAVVQIYHDNAGDLELVAKSIES--SD 74
Query: 237 LDYRRY 254
L++ RY
Sbjct: 75 LNFTRY 80
>UniRef50_A2FU78 Cluster: Dynein heavy chain family protein; n=1;
Trichomonas vaginalis G3|Rep: Dynein heavy chain family
protein - Trichomonas vaginalis G3
Length = 4012
Score = 37.9 bits (84), Expect = 0.23
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -1
Query: 435 SKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTS 256
+K L+ F NT ++ +V + EK + L+ SP++ G+SRP STS T+
Sbjct: 37 TKSLFATKLFDNTAEEYEIVK--PINEKEENLLHAQSPALLAFRKGTSRPATKSTSRATT 94
Query: 255 HSVGSRVLIRPSL 217
V S + PSL
Sbjct: 95 SLVPSAAQMMPSL 107
>UniRef50_Q2J707 Cluster: Phage integrase; n=4; Actinomycetales|Rep:
Phage integrase - Frankia sp. (strain CcI3)
Length = 385
Score = 35.9 bits (79), Expect = 0.92
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = -1
Query: 504 MRCSGSKPFK*TRTFFISSSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLV---- 337
MR +G+ P R S + +FS Y R F +T R+V ++ +VL
Sbjct: 126 MRAAGAAPASLARR--ASMARVFSSYA-ARHGFLDTDVAARLVGNRTVRRVPEVLTAAAA 182
Query: 336 --LGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVL 232
L ++PS D PPG+S+P + S S V R +
Sbjct: 183 RQLLENPSPDVSPPGTSQPSGLPDSTADSERVVRRAV 219
>UniRef50_UPI0000E47FEE Cluster: PREDICTED: similar to guanine
nucleotide exchange factor Lbc; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to guanine nucleotide
exchange factor Lbc - Strongylocentrotus purpuratus
Length = 1982
Score = 35.1 bits (77), Expect = 1.6
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -3
Query: 661 RPXSCLMIAKHFQPRKSQRPGCPSADVRSPGPAARME 551
RP S L K FQP Q PG S+DVRSPG A +E
Sbjct: 944 RPNSILNSTKPFQPMSFQPPG-SSSDVRSPGGNAGIE 979
>UniRef50_Q7QYE0 Cluster: GLP_162_45192_43960; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_162_45192_43960 - Giardia lamblia
ATCC 50803
Length = 410
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 87 LSGQRIKTRKRDEKEKYDPNGFRDALVXGLERAGGDLDAAYKYLDSAGSKLDYRRY 254
L+ +I+TRKR+ + DP F +AL G L+ +K LDSA + +DY+ Y
Sbjct: 9 LADTKIRTRKRNIVVQKDPESFLEALEHLF--VGDSLEEVFKNLDSA-TDIDYKTY 61
>UniRef50_UPI0000EBE1D4 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 534
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 100 GSRPEKEMRKRSMTRTVSATLWYXVWS-GPV-AISTQPTST*TRPDQNSTTDAMRSHIRC 273
G R R RS + T A +W W+ GP A S+ P T T + + +R+ R
Sbjct: 445 GERATAPPRPRSGSETSEARIWQRQWAGGPASAYSSPPVGTETSGSRVPAPEWLRTRSRT 504
Query: 274 THCWRP-AAAGRFGV 315
W P A RFG+
Sbjct: 505 GLWWWPQAPESRFGL 519
>UniRef50_Q9JMW6 Cluster: Putative uncharacterized protein orf235;
n=1; Bradyrhizobium japonicum|Rep: Putative
uncharacterized protein orf235 - Bradyrhizobium
japonicum
Length = 235
Score = 33.5 bits (73), Expect = 4.9
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 315 DTEPPGSSRPPAMSTSNMTSHSVGSRV-LIRPSLGTCRLRRDRHRPAPDXVPERRGNRSG 139
D +P G + + + + H R+ L+R + CR RR R RPAPD E G G
Sbjct: 62 DADPRGRAAGSTPAPARVDLHQERRRLGLLRGARRACRARR-RDRPAPDRSREAEGTARG 120
Query: 138 HT 133
T
Sbjct: 121 GT 122
>UniRef50_A1FXQ0 Cluster: Beta-lactamase-like; n=11;
Gammaproteobacteria|Rep: Beta-lactamase-like -
Stenotrophomonas maltophilia R551-3
Length = 493
Score = 33.5 bits (73), Expect = 4.9
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2
Query: 488 RSLSSRPEPFS--FPLRTFFPSTCTYAXVSRIPVRNFAWCPYPHWRRRCRCWSWAIRRPS 315
R+ S P P + +P+ T T A +R P +W PH R CR WSW++ +
Sbjct: 3 RTRWSPPSPATTCWPVPTARARAMTSAASARSPR---SWL-LPHARPACRAWSWSVAPAA 58
Query: 314 TPNRPAAA 291
+RPA +
Sbjct: 59 WKSRPACS 66
>UniRef50_Q5ZC39 Cluster: CRK1 protein-like; n=2; Oryza sativa
(japonica cultivar-group)|Rep: CRK1 protein-like - Oryza
sativa subsp. japonica (Rice)
Length = 374
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 433 GKNVRRGNEKGSGLLERLRSRTAHQVARMTALWIGNGCVPPS 558
G + R G ++G G +R R AHQ+ R A G G PS
Sbjct: 252 GGDARDGEDEGGGWAKREREAVAHQIWRRPATSTGGGTAAPS 293
>UniRef50_Q65XX2 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 1446
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 362 NEDMDTMRNFEQVFVKLXRRYKYLEKMFEEEMKKVLVYLKGFDPEQRIKWRA 517
+EDMDT E +++K +Y+EK+FE + L FD ++ +W A
Sbjct: 878 SEDMDT--KIETIYLKTDTPLEYVEKVFEASQSENSFPLFQFDQSKKYEWLA 927
>UniRef50_Q5B1T9 Cluster: Autophagy-related protein 2; n=1;
Emericella nidulans|Rep: Autophagy-related protein 2 -
Emericella nidulans (Aspergillus nidulans)
Length = 2102
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 327 SPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRH 187
S S + P SS PPA S+++ ++H++ + + PS T + D H
Sbjct: 294 SKSSQSSSPASSVPPAPSSASSSTHAMMASTIFEPSQPTVDIPEDEH 340
>UniRef50_A2BDP0 Cluster: Cofactor required for Sp1 transcriptional
activation, subunit 2; n=23; Euteleostomi|Rep: Cofactor
required for Sp1 transcriptional activation, subunit 2 -
Mus musculus (Mouse)
Length = 798
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -1
Query: 327 SPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPERRGN 148
SP + P ++R P MS +N + HS V P GT + P P +P+R
Sbjct: 478 SPQVSGPSP-ATRLPGMSPANPSLHSPVPDVSHSPRAGTSSQTMPTNMPPPRKLPQRSWA 536
Query: 147 RSGHTSLSH 121
S T L+H
Sbjct: 537 ASIPTILTH 545
>UniRef50_Q0J4K5 Cluster: Os08g0508500 protein; n=7; Oryza sativa|Rep:
Os08g0508500 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1407
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 324 ANRP-RPTPASSPPMRIWTPCEISNRYS*NXCVGTSTWKKCSKRK 455
AN P RP P SS + W P +R+S C+G + K S++K
Sbjct: 1149 ANPPKRPDPQSSDTKKAWCPIHKMDRHSLEDCLGAAPKMKWSEQK 1193
>UniRef50_A2E241 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 227
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -1
Query: 345 VLVLGDSPSIDTEPPGSSRPP------AMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHR 184
+ +L D+P PP SS+PP + ST++ H GS +P+ R+ H
Sbjct: 38 IAILLDTPENTPPPPESSKPPSHASAKSSSTTSTHHHHTGSHTAAKPAQSHHSSRKQSHV 97
Query: 183 PAPDXV 166
P D +
Sbjct: 98 PKLDHI 103
>UniRef50_Q83FY7 Cluster: 50S ribosomal protein L4; n=2; Tropheryma
whipplei|Rep: 50S ribosomal protein L4 - Tropheryma
whipplei (strain Twist) (Whipple's bacillus)
Length = 248
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 295 AAGRFGVDGRRIAQDQHLHLLRQ*GYGHHAKFRTGIRETXA*VQVLGKNVRRGNEKGSG 471
A G + G D +LHL+ Q A FR G +T + +V G + +KG+G
Sbjct: 14 AVGTLQLVGHLFDSDPNLHLIHQVVVAQQAAFRQGTHKTKSRAEVSGSGRKPFRQKGTG 72
>UniRef50_UPI0000E471B7 Cluster: PREDICTED: similar to topoisomerase
I beta; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to topoisomerase I beta -
Strongylocentrotus purpuratus
Length = 879
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -1
Query: 372 ISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRD 193
I ++ + ++ V+ D +PP SS P + S+ +S G +PS + R +
Sbjct: 62 IKTMPDGSKIKVMPDGRKFKMKPPTSSMAPKQNNSSHSSKPKGGSPPPKPSSNSARPEKP 121
Query: 192 RHRPA 178
H+P+
Sbjct: 122 PHKPS 126
>UniRef50_Q9W0L2 Cluster: CG13908-PA; n=4; Sophophora|Rep:
CG13908-PA - Drosophila melanogaster (Fruit fly)
Length = 841
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 636 RNTSSHESPSA--QVVXQQMFVHQDQQHGWRHASVTDPQCSHARHLMRCSGSKP 481
R+TS E P QV QQ VH QQH R+A+ CS+ + ++ C + P
Sbjct: 77 RSTSRAEEPHQPQQVHHQQQQVHHQQQHQSRYATHEYVHCSYEKEVV-CDQANP 129
>UniRef50_Q9VCS4 Cluster: CG6688-PA; n=2; Sophophora|Rep: CG6688-PA
- Drosophila melanogaster (Fruit fly)
Length = 424
Score = 32.7 bits (71), Expect = 8.6
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -1
Query: 339 VLGDSPSIDTEP-PGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVP 163
V GDS I P ++ PP +T + T + + PSL T L+++ +P + V
Sbjct: 278 VAGDSSEIPARTSPVTATPPERTTMHATLDANAAH----PSLSTNDLQQEGVKPNAEGVD 333
Query: 162 ERRGNRSGHTSLSHL 118
E G S H S + L
Sbjct: 334 EESGTNSSHISATSL 348
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,509,335
Number of Sequences: 1657284
Number of extensions: 15766029
Number of successful extensions: 59445
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 55538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59386
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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