Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060459.seq
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.4  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   9.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.4  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 87  LSGQRIKTRKRDEKEKYDPNGFRD 158
           +SG         + EKYDP  F D
Sbjct: 393 ISGLHYDPEYYPDPEKYDPERFSD 416


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 99  RIKTRKRDEKEKY 137
           R K ++RDE+E+Y
Sbjct: 403 RHKQKRRDERERY 415


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 343 VGLGRFAVHRH 311
           VG+G+F VHR+
Sbjct: 88  VGIGQFLVHRN 98


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = -1

Query: 291 RPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXV 166
           R   +    M+S+   SRV++ P      L   ++ P P  +
Sbjct: 117 RNSTLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYEPNPSII 158


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = -1

Query: 291 RPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXV 166
           R   +    M+S+   SRV++ P      L   ++ P P  +
Sbjct: 117 RNSTLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYEPNPSII 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,913
Number of Sequences: 336
Number of extensions: 3683
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)