Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060459.seq
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 33 0.14
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 29 3.1
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 29 3.1
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 29 3.1
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 29 3.1
AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 29 3.1
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical ... 28 5.4
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 28 5.4
AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein. 28 5.4
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 9.4
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 9.4
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 27 9.4
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 27 9.4
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 362 NEDMDTMRNFEQVFVKLXRRYKYLEKMFEEEMKKVLVYLKGFDPEQRIKWRA 517
+EDMDT E +++K +Y+EK+FE + L FD ++ +W A
Sbjct: 878 SEDMDT--KIETIYLKTDTPLEYVEKVFEASQSENSFPLFQFDQSKKYEWLA 927
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 94 VNGSRPEKEMRKRSMTRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTTDAMRSH 264
V+ S +KEMR + R+ + T V P+ + PTS T P + ++TD+ + H
Sbjct: 324 VSDSDDDKEMRYHPLFRSNTLT---HVHFNPLGTISTPTSIATTPQRCTSTDSKQKH 377
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -1
Query: 411 SFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVL 232
SF ++ S+ M + + ++ L +P +PP R A S VG RV
Sbjct: 49 SFISSGSEDVMSPVQKRVQPKRMAQLKIAPLPLVQPPPPPRTRACQRPIRYSFDVGERVA 108
Query: 231 IRPSLGTCRLRRDRHRPAPD-XVPERR 154
++P L + R RPA +P R+
Sbjct: 109 VKPCLKSATKTPIRVRPADGAMIPPRK 135
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -1
Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -1
Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -1
Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 99 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 142
>AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical
protein Y37A1B.2a protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -1
Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Frame = -1
Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271
+SN+ K + +N + S ++++ +M+ +GD+P + PP + P +
Sbjct: 607 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 662
Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115
S + SR+ P LG + R + +P +P +++ +T++ LF
Sbjct: 663 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Frame = -1
Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271
+SN+ K + +N + S ++++ +M+ +GD+P + PP + P +
Sbjct: 513 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 568
Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115
S + SR+ P LG + R + +P +P +++ +T++ LF
Sbjct: 569 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Frame = -1
Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271
+SN+ K + +N + S ++++ +M+ +GD+P + PP + P +
Sbjct: 607 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 662
Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115
S + SR+ P LG + R + +P +P +++ +T++ LF
Sbjct: 663 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722
>AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical
protein Y54G9A.7 protein.
Length = 244
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +2
Query: 383 RNFEQVFVKLXR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 508
R +++ F K + R K L E+ F++ MK +L L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Frame = -1
Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271
+SN+ K + +N + S ++++ +M+ +GD+P + PP + P +
Sbjct: 513 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 568
Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115
S + SR+ P LG + R + +P +P +++ +T++ LF
Sbjct: 569 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628
>AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein.
Length = 244
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +2
Query: 383 RNFEQVFVKLXR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 508
R +++ F K + R K L E+ F++ MK +L L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246
T T +AT P +TQPT+T T P +TT
Sbjct: 212 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 247
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246
T T +AT P +TQPT+T T P +TT
Sbjct: 208 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 243
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246
T T +AT P +TQPT+T T P +TT
Sbjct: 151 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 186
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 300 GSSRPPAMSTSNMTSHSVGSRVLIRP 223
GSSRPP + S M+ + + + +I+P
Sbjct: 727 GSSRPPGSAASLMSLNKIANETIIKP 752
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 300 GSSRPPAMSTSNMTSHSVGSRVLIRP 223
GSSRPP + S M+ + + + +I+P
Sbjct: 755 GSSRPPGSAASLMSLNKIANETIIKP 780
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,052,561
Number of Sequences: 27780
Number of extensions: 358536
Number of successful extensions: 1305
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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