BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060459.seq (684 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 33 0.14 Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 29 2.3 AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 29 3.1 AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 29 3.1 AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 29 3.1 AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 29 3.1 AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 29 3.1 Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 28 5.4 Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 28 5.4 Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 28 5.4 AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical ... 28 5.4 AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 28 5.4 AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein. 28 5.4 U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 9.4 U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 9.4 U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 9.4 AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 27 9.4 AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 27 9.4 >AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical protein Y54E10A.11 protein. Length = 1446 Score = 33.5 bits (73), Expect = 0.14 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = +2 Query: 362 NEDMDTMRNFEQVFVKLXRRYKYLEKMFEEEMKKVLVYLKGFDPEQRIKWRA 517 +EDMDT E +++K +Y+EK+FE + L FD ++ +W A Sbjct: 878 SEDMDT--KIETIYLKTDTPLEYVEKVFEASQSENSFPLFQFDQSKKYEWLA 927 >Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical protein T19B10.5 protein. Length = 705 Score = 29.5 bits (63), Expect = 2.3 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = +1 Query: 94 VNGSRPEKEMRKRSMTRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTTDAMRSH 264 V+ S +KEMR + R+ + T V P+ + PTS T P + ++TD+ + H Sbjct: 324 VSDSDDDKEMRYHPLFRSNTLT---HVHFNPLGTISTPTSIATTPQRCTSTDSKQKH 377 >AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical protein Y53F4B.9 protein. Length = 1168 Score = 29.1 bits (62), Expect = 3.1 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Frame = -1 Query: 411 SFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVL 232 SF ++ S+ M + + ++ L +P +PP R A S VG RV Sbjct: 49 SFISSGSEDVMSPVQKRVQPKRMAQLKIAPLPLVQPPPPPRTRACQRPIRYSFDVGERVA 108 Query: 231 IRPSLGTCRLRRDRHRPAPD-XVPERR 154 ++P L + R RPA +P R+ Sbjct: 109 VKPCLKSATKTPIRVRPADGAMIPPRK 135 >AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical protein Y37A1B.2d protein. Length = 564 Score = 29.1 bits (62), Expect = 3.1 Identities = 19/49 (38%), Positives = 22/49 (44%) Frame = -1 Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160 PP SS PPA S+ S V PS G + H+P P VPE Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116 >AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical protein Y37A1B.2c protein. Length = 566 Score = 29.1 bits (62), Expect = 3.1 Identities = 19/49 (38%), Positives = 22/49 (44%) Frame = -1 Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160 PP SS PPA S+ S V PS G + H+P P VPE Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116 >AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical protein Y37A1B.2b protein. Length = 592 Score = 29.1 bits (62), Expect = 3.1 Identities = 19/49 (38%), Positives = 22/49 (44%) Frame = -1 Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160 PP SS PPA S+ S V PS G + H+P P VPE Sbjct: 99 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 142 >AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical protein Y37A1B.2a protein. Length = 164 Score = 29.1 bits (62), Expect = 3.1 Identities = 19/49 (38%), Positives = 22/49 (44%) Frame = -1 Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160 PP SS PPA S+ S V PS G + H+P P VPE Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116 >Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical protein C33G3.1b protein. Length = 887 Score = 28.3 bits (60), Expect = 5.4 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%) Frame = -1 Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271 +SN+ K + +N + S ++++ +M+ +GD+P + PP + P + Sbjct: 607 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 662 Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115 S + SR+ P LG + R + +P +P +++ +T++ LF Sbjct: 663 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722 >Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical protein C33G3.1a protein. Length = 793 Score = 28.3 bits (60), Expect = 5.4 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%) Frame = -1 Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271 +SN+ K + +N + S ++++ +M+ +GD+P + PP + P + Sbjct: 513 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 568 Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115 S + SR+ P LG + R + +P +P +++ +T++ LF Sbjct: 569 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628 >Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical protein C33G3.1b protein. Length = 887 Score = 28.3 bits (60), Expect = 5.4 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%) Frame = -1 Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271 +SN+ K + +N + S ++++ +M+ +GD+P + PP + P + Sbjct: 607 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 662 Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115 S + SR+ P LG + R + +P +P +++ +T++ LF Sbjct: 663 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722 >AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical protein Y54G9A.7 protein. Length = 244 Score = 28.3 bits (60), Expect = 5.4 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%) Frame = +2 Query: 383 RNFEQVFVKLXR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 508 R +++ F K + R K L E+ F++ MK +L L+ F+PE+ +K Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172 >AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein protein. Length = 793 Score = 28.3 bits (60), Expect = 5.4 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%) Frame = -1 Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271 +SN+ K + +N + S ++++ +M+ +GD+P + PP + P + Sbjct: 513 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 568 Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115 S + SR+ P LG + R + +P +P +++ +T++ LF Sbjct: 569 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628 >AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein. Length = 244 Score = 28.3 bits (60), Expect = 5.4 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%) Frame = +2 Query: 383 RNFEQVFVKLXR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 508 R +++ F K + R K L E+ F++ MK +L L+ F+PE+ +K Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172 >U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical protein C23H3.9a protein. Length = 503 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246 T T +AT P +TQPT+T T P +TT Sbjct: 212 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 247 >U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical protein C23H3.9b protein. Length = 489 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246 T T +AT P +TQPT+T T P +TT Sbjct: 208 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 243 >U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical protein C23H3.9d protein. Length = 432 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246 T T +AT P +TQPT+T T P +TT Sbjct: 151 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 186 >AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical protein W05F2.4b protein. Length = 806 Score = 27.5 bits (58), Expect = 9.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = -1 Query: 300 GSSRPPAMSTSNMTSHSVGSRVLIRP 223 GSSRPP + S M+ + + + +I+P Sbjct: 727 GSSRPPGSAASLMSLNKIANETIIKP 752 >AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical protein W05F2.4a protein. Length = 834 Score = 27.5 bits (58), Expect = 9.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = -1 Query: 300 GSSRPPAMSTSNMTSHSVGSRVLIRP 223 GSSRPP + S M+ + + + +I+P Sbjct: 755 GSSRPPGSAASLMSLNKIANETIIKP 780 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,052,561 Number of Sequences: 27780 Number of extensions: 358536 Number of successful extensions: 1305 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1244 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1301 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1560745544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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