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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060459.seq
         (684 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ...    33   0.14 
Z74043-7|CAA98539.2|  705|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ...    29   3.1  
AL023835-4|CAD56254.1|  564|Caenorhabditis elegans Hypothetical ...    29   3.1  
AL023835-3|CAD56253.1|  566|Caenorhabditis elegans Hypothetical ...    29   3.1  
AL023835-2|CAA19487.2|  592|Caenorhabditis elegans Hypothetical ...    29   3.1  
AL023835-1|CAA19486.1|  164|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z78540-6|CAD30431.1|  887|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z78540-5|CAB01738.2|  793|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z72501-3|CAD30430.1|  887|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AL032648-6|CAC35867.1|  244|Caenorhabditis elegans Hypothetical ...    28   5.4  
AJ133838-1|CAB44432.1|  793|Caenorhabditis elegans DYC-1 protein...    28   5.4  
AF303259-1|AAG50217.1|  244|Caenorhabditis elegans 2O16 protein.       28   5.4  
U80453-11|AAN63452.2|  503|Caenorhabditis elegans Hypothetical p...    27   9.4  
U80453-10|AAN63453.1|  489|Caenorhabditis elegans Hypothetical p...    27   9.4  
U80453-9|AAT81206.1|  432|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AF106582-7|ABD94096.1|  806|Caenorhabditis elegans Hypothetical ...    27   9.4  
AF106582-6|ABD94095.1|  834|Caenorhabditis elegans Hypothetical ...    27   9.4  

>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
            protein Y54E10A.11 protein.
          Length = 1446

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +2

Query: 362  NEDMDTMRNFEQVFVKLXRRYKYLEKMFEEEMKKVLVYLKGFDPEQRIKWRA 517
            +EDMDT    E +++K     +Y+EK+FE    +    L  FD  ++ +W A
Sbjct: 878  SEDMDT--KIETIYLKTDTPLEYVEKVFEASQSENSFPLFQFDQSKKYEWLA 927


>Z74043-7|CAA98539.2|  705|Caenorhabditis elegans Hypothetical
           protein T19B10.5 protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 94  VNGSRPEKEMRKRSMTRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTTDAMRSH 264
           V+ S  +KEMR   + R+ + T    V   P+   + PTS  T P + ++TD+ + H
Sbjct: 324 VSDSDDDKEMRYHPLFRSNTLT---HVHFNPLGTISTPTSIATTPQRCTSTDSKQKH 377


>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
           protein Y53F4B.9 protein.
          Length = 1168

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
 Frame = -1

Query: 411 SFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVL 232
           SF ++ S+  M  +    +  ++  L  +P    +PP   R  A       S  VG RV 
Sbjct: 49  SFISSGSEDVMSPVQKRVQPKRMAQLKIAPLPLVQPPPPPRTRACQRPIRYSFDVGERVA 108

Query: 231 IRPSLGTCRLRRDRHRPAPD-XVPERR 154
           ++P L +      R RPA    +P R+
Sbjct: 109 VKPCLKSATKTPIRVRPADGAMIPPRK 135


>AL023835-4|CAD56254.1|  564|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2d protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -1

Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160
           PP SS PPA S+         S V   PS G     +  H+P P  VPE
Sbjct: 73  PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116


>AL023835-3|CAD56253.1|  566|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2c protein.
          Length = 566

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -1

Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160
           PP SS PPA S+         S V   PS G     +  H+P P  VPE
Sbjct: 73  PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116


>AL023835-2|CAA19487.2|  592|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2b protein.
          Length = 592

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -1

Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160
           PP SS PPA S+         S V   PS G     +  H+P P  VPE
Sbjct: 99  PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 142


>AL023835-1|CAA19486.1|  164|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2a protein.
          Length = 164

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -1

Query: 306 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDXVPE 160
           PP SS PPA S+         S V   PS G     +  H+P P  VPE
Sbjct: 73  PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116


>Z78540-6|CAD30431.1|  887|Caenorhabditis elegans Hypothetical
           protein C33G3.1b protein.
          Length = 887

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
 Frame = -1

Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271
           +SN+  K  +     +N      + S ++++ +M+   +GD+P   + PP   + P   +
Sbjct: 607 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 662

Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115
           S +      SR+   P LG  + R  +           +P  +P    +++ +T++  LF
Sbjct: 663 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722


>Z78540-5|CAB01738.2|  793|Caenorhabditis elegans Hypothetical
           protein C33G3.1a protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
 Frame = -1

Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271
           +SN+  K  +     +N      + S ++++ +M+   +GD+P   + PP   + P   +
Sbjct: 513 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 568

Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115
           S +      SR+   P LG  + R  +           +P  +P    +++ +T++  LF
Sbjct: 569 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628


>Z72501-3|CAD30430.1|  887|Caenorhabditis elegans Hypothetical
           protein C33G3.1b protein.
          Length = 887

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
 Frame = -1

Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271
           +SN+  K  +     +N      + S ++++ +M+   +GD+P   + PP   + P   +
Sbjct: 607 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 662

Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115
           S +      SR+   P LG  + R  +           +P  +P    +++ +T++  LF
Sbjct: 663 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722


>AL032648-6|CAC35867.1|  244|Caenorhabditis elegans Hypothetical
           protein Y54G9A.7 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +2

Query: 383 RNFEQVFVKLXR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 508
           R +++ F K  +  R K L  E+ F++ MK +L  L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172


>AJ133838-1|CAB44432.1|  793|Caenorhabditis elegans DYC-1 protein
           protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
 Frame = -1

Query: 450 SSNIFSKYLYLRXSFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMST 271
           +SN+  K  +     +N      + S ++++ +M+   +GD+P   + PP   + P   +
Sbjct: 513 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 568

Query: 270 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDXVPERRGNRSGHTSLSHLF 115
           S +      SR+   P LG  + R  +           +P  +P    +++ +T++  LF
Sbjct: 569 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628


>AF303259-1|AAG50217.1|  244|Caenorhabditis elegans 2O16 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +2

Query: 383 RNFEQVFVKLXR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 508
           R +++ F K  +  R K L  E+ F++ MK +L  L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172


>U80453-11|AAN63452.2|  503|Caenorhabditis elegans Hypothetical
           protein C23H3.9a protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246
           T T +AT        P   +TQPT+T T P   +TT
Sbjct: 212 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 247


>U80453-10|AAN63453.1|  489|Caenorhabditis elegans Hypothetical
           protein C23H3.9b protein.
          Length = 489

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246
           T T +AT        P   +TQPT+T T P   +TT
Sbjct: 208 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 243


>U80453-9|AAT81206.1|  432|Caenorhabditis elegans Hypothetical
           protein C23H3.9d protein.
          Length = 432

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 139 TRTVSATLWYXVWSGPVAISTQPTST*TRPDQNSTT 246
           T T +AT        P   +TQPT+T T P   +TT
Sbjct: 151 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 186


>AF106582-7|ABD94096.1|  806|Caenorhabditis elegans Hypothetical
           protein W05F2.4b protein.
          Length = 806

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 300 GSSRPPAMSTSNMTSHSVGSRVLIRP 223
           GSSRPP  + S M+ + + +  +I+P
Sbjct: 727 GSSRPPGSAASLMSLNKIANETIIKP 752


>AF106582-6|ABD94095.1|  834|Caenorhabditis elegans Hypothetical
           protein W05F2.4a protein.
          Length = 834

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 300 GSSRPPAMSTSNMTSHSVGSRVLIRP 223
           GSSRPP  + S M+ + + +  +I+P
Sbjct: 755 GSSRPPGSAASLMSLNKIANETIIKP 780


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,052,561
Number of Sequences: 27780
Number of extensions: 358536
Number of successful extensions: 1305
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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