Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060458.seq
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.1  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   9.3  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 131 LRFSCAFHFFNFHV 90
           L F CAF FFN H+
Sbjct: 180 LLFCCAFIFFNMHL 193


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 576 KRPRVPNNLNLIQLYMNRYQRK 641
           K+P +   LN   LYM   + K
Sbjct: 475 KKPHIKKPLNAFMLYMKEMRAK 496


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 576 KRPRVPNNLNLIQLYMNRYQRK 641
           K+P +   LN   LYM   + K
Sbjct: 367 KKPHIKKPLNAFMLYMKEMRAK 388


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 529 GWRLWKNSISCDHRTKNGQG 588
           GW LWK    C+ +    +G
Sbjct: 1   GWSLWKVRGRCEGKDSKWRG 20


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 634 W*RFIYSWIKFKLFGTLGRF*SYDHMRYCF 545
           W  F  SW    L   LG   S+ H  +C+
Sbjct: 12  WRAFTASWSPDTLAKNLGINSSFVHKEHCY 41



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +3

Query: 576 KRPRVPNNLNLIQLYMNRYQR 638
           K  ++PNN+NL+ +    + +
Sbjct: 54  KLSKIPNNVNLMDVVAREFDK 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,288
Number of Sequences: 336
Number of extensions: 3715
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)