Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060458.seq
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 42 6e-04
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 41 8e-04
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 40 0.002
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 39 0.004
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 38 0.010
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 36 0.023
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 36 0.023
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 36 0.030
SB_732| Best HMM Match : AAA (HMM E-Value=0) 36 0.030
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 36 0.040
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 35 0.053
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 34 0.093
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 33 0.28
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 32 0.37
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 32 0.37
SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_34097| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17) 32 0.49
SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 31 1.1
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038) 30 1.5
SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24) 30 2.0
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 29 3.5
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 29 3.5
SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6) 29 3.5
SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 29 4.6
SB_56370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 29 4.6
SB_56551| Best HMM Match : Fe_hyd_lg_C (HMM E-Value=0.0049) 28 6.1
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_58257| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 28 8.0
SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27) 28 8.0
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 28 8.0
SB_16789| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 8.0
SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 89.0 bits (211), Expect = 3e-18
Identities = 56/132 (42%), Positives = 78/132 (59%)
Frame = +2
Query: 254 LIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLME 433
+I+ K+AGRA+L+AG PGTGKTAIA+ +AQ LG PF + GSE++S E+ KTE L +
Sbjct: 161 MIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEALTQ 220
Query: 434 NFRRAIGLRIRETKEVYEGEVTELTLLKQKILAGGYGKTVSHVIIGLKTAKGTKQLKLDP 613
+ L + ET E+ EGEV E+ + + G G V + LKT + L
Sbjct: 221 ---PSESLLVEET-EIIEGEVVEVQIDRP---TTGTGAKVGK--LTLKTTEMETIYDLGT 271
Query: 614 TIYESLPKEKVE 649
+ ESL KEKV+
Sbjct: 272 KMIESLTKEKVQ 283
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +3
Query: 141 AHSHIKGLGLDENGVPIQMAAGLVGQESAREAAGIVVD 254
AHSHI+GLGLD+ Q++ G+VGQ +AR AAGI+++
Sbjct: 123 AHSHIRGLGLDDALEARQVSQGMVGQVTARRAAGIILE 160
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 391
+ +L+GPPGTGKT +A A+A E G VPF + GSE
Sbjct: 82 KGAILSGPPGTGKTLLAKAVAGEAG--VPFLSISGSE 116
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 41.1 bits (92), Expect = 8e-04
Identities = 28/57 (49%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEV-LMENFRRA 448
R +LL GP GTGKT IA A+A E G FC + G EV S +TE L E F A
Sbjct: 291 RGILLYGPSGTGKTMIARAVANETGVHF-FC-INGPEVLSRYYGETEARLREIFTEA 345
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 391
+ LL GPPGTGKT +A A+A E VPF M GS+
Sbjct: 159 KGALLVGPPGTGKTLLAKAVATE--ADVPFLSMAGSD 193
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 448
+LLAGPPG GKT +A AIA E G + F + G E+ + + ++E + + F+RA
Sbjct: 20 ILLAGPPGCGKTLLAKAIANESG--INFISVKGPELLNMYVGESERAVRQVFQRA 72
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGS--EVYSTEIKKTEVLMENFRRAIGLR 460
++L GPPG+GKT +A I + + P + S + + TE++KTE E +R ++
Sbjct: 1252 IILRGPPGSGKTHVAKLIKDKEVSSGAHAPRILSLDDYFLTEVEKTEKDPETGKR---IK 1308
Query: 461 IRETKEVYEGEVTEL 505
+ T+ VYE E+ E+
Sbjct: 1309 KKVTEYVYEPEMEEV 1323
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGT 358
R +L+ GPPGTGKT +A A+A E GT
Sbjct: 284 RGVLMVGPPGTGKTMLAKAVATECGT 309
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 448
LLL GPPGTGKT +A +A+E G + F + G E+ S I +E + + F RA
Sbjct: 704 LLLYGPPGTGKTLLAGVVAKECG--LNFISIKGPELLSKYIGASEQAVRDMFTRA 756
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYS-TEIKKTEVLMENFRRAI 451
LL GPPG GKT +A AIA EL ++PF + +E+ S + E + E F A+
Sbjct: 714 LLHGPPGCGKTLLAHAIAGEL--EMPFLKLAATEIVSGVSGESEEKVRELFTSAV 766
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 394
+LLAGPPG GKT +A AIA E G + F + G E+
Sbjct: 20 ILLAGPPGCGKTLLAKAIANESG--INFISVKGPEL 53
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +2
Query: 266 KKMAGR---ALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 391
K++ G+ +LL G PGTGKT +A A+A E G VPF GSE
Sbjct: 157 KRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAG--VPFFFCSGSE 199
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 391
R +LL GPPG GKT +A A+A T F +VGSE
Sbjct: 199 RGVLLYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 233
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELG 355
+A LL+GPPG GKT A + QELG
Sbjct: 272 KAALLSGPPGVGKTTTATLVCQELG 296
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELG---TKVPFCPMVGSEVYSTEIKKTE 421
R +L GPPGTGKT +A A+A E KV F G++ S + ++E
Sbjct: 919 RGVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESE 968
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLR 460
+ +LL GPPGTGKT +A I L T+ P + G EV + + ++E N R+
Sbjct: 183 KGILLFGPPGTGKTLMARQIGTMLNTREPKI-ISGPEVLNKFVGESEA---NIRKLFAEA 238
Query: 461 IRETKEVYEGEVTELTLLKQ 520
E K + L + +
Sbjct: 239 EEEQKRFGDNSALHLIIFDE 258
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 394
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 212 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 247
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 394
+ +LL GPPGTGKT A A+A T F ++GSE+
Sbjct: 119 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 154
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEV-LMENFRRA 448
+LL GPPGTGKT +A A+A E + F + G E+ + + ++E + E F RA
Sbjct: 847 VLLYGPPGTGKTLMAKAVATE--CSLNFLSVKGPELINMYVGQSEQNVREVFSRA 899
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 35.1 bits (77), Expect = 0.053
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMV 382
LL GPPGTGKT+ LA+A++L F MV
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQLYPDKQFGSMV 44
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 35.1 bits (77), Expect = 0.053
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 394
+ ++L G PGTGKT +A A+A + T F +VGSE+
Sbjct: 415 KGVILYGQPGTGKTLLAKAVANQ--TSATFLRVVGSEL 450
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 260 RSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 394
R+K M R LL GPPGTGKT A ++A+ G + + M G +V
Sbjct: 324 RNKGMY-RNLLFYGPPGTGKTMFAKSLARHSG--MDYAVMTGGDV 365
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 254 LIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTK 361
L+ + A R +LL GP GTGKT++A + Q+L K
Sbjct: 1746 LVYNLIQAKRPVLLTGPVGTGKTSVAQKVLQKLDPK 1781
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQELGTKV 364
+ LL GPPG GKT +A IAQ G V
Sbjct: 381 KVALLCGPPGLGKTTLAHVIAQHAGYNV 408
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 284 ALLLAGPPGTGKTAIALAIAQELGTKV 364
A+L+ GP G GKTA A A ELG KV
Sbjct: 640 AMLVVGPRGAGKTASIYACAGELGYKV 666
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 32.3 bits (70), Expect = 0.37
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTK-VPFCPMVGSEVY----STEIKKTEVLMENFRRAI 451
+LL GPPG GKT + + Q L ++ VP E+ + V ++ R +
Sbjct: 54 VLLTGPPGIGKTTLCSKVKQALASRGVPTQGFYTEEIRGPGGGARVGFDVVTLDGGRGPL 113
Query: 452 GLRIRETKEVYEG-EVTELTLLKQKILAGGYGKTVSHVIIGLKTAKGTK 595
R++ + +EG V +LL+Q G + +S V G ++ K
Sbjct: 114 A-RVKTLRNCWEGRSVRASSLLRQLAKGGCAARRLSWVTPGFSQSRRCK 161
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 239 RDSCRLIRSKKMAGRALLLAGPPGTGKTAIALAIAQELG 355
+++ R++R+ ++ R +LL G PG GKT++ AIA+ G
Sbjct: 1605 QNATRILRALQLP-RPILLEGSPGVGKTSLVSAIAKASG 1642
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 275 AGRALLLAGPPGTGKTAIALAIAQELGTKVP 367
AG +LL GP G+GKT + +A G P
Sbjct: 117 AGSGVLLEGPVGSGKTCLVEHVASMCGRSTP 147
>SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 31.9 bits (69), Expect = 0.49
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +2
Query: 236 CRDSCRLIRSKKMAG-RALLLAGPPGTGKTAIALAIAQELG-TKVPFCPMVGSEVYSTEI 409
C D + K + R + + G PG+GKT +A +A+ G T + ++ E
Sbjct: 89 CDDEIAKTKGKGLLNARVIFVIGGPGSGKTELAKLLAESSGRTHISMGQLLKEEATKDTD 148
Query: 410 KKTEVLMENFRRAIGLRIRETKEVYEGEVTELTLLKQKILAGGY 541
+ EV RAIG+ + E G ++E + +K L GGY
Sbjct: 149 RAREV-----ARAIGMGTLVSPEHALGILSETIVRGEKNL-GGY 186
>SB_34097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 284 ALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 391
A+L+ GP G GKTA A A ELG K C S+
Sbjct: 30 AMLVVGPRGAGKTASIYACAGELGYKDVECDTDASQ 65
>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
Length = 786
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 233 GCRDSCRLIRSKKMAG--RALLLAGPPGTGKTAIALAIAQEL 352
G C+ + +K G + + + GPPG GK+ +A+ +A EL
Sbjct: 110 GRESECQAVFTKLTTGPCQIVTITGPPGFGKSCVAIHVAHEL 151
>SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +2
Query: 293 LAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTE----IKKTEVLMENFRRAI 451
+ GP G+GKTA+ LA+ + L C +V +++++ E + K + L E RA+
Sbjct: 28 IGGPVGSGKTALVLALCKYLRDSCNIC-VVTNDIFTKEDWEFLVKNKALDEKRMRAV 83
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQE 349
+ +L GPPG GKT +A AIA E
Sbjct: 345 KGVLFYGPPGCGKTLLAKAIANE 367
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 275 AGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI 409
+ + +++ GP G GKTA+ +AI +E+ K + G+ + +I
Sbjct: 506 SNQVVMVTGPVGCGKTALLMAILKEIPLKQGSVTLCGTVAFVDQI 550
>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
Length = 1172
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 248 CRLIRSKKMAGRALLLAGPPGTGKTAIALAIAQEL-GTKVPFCPMVGSEVYSTEIKKTEV 424
C ++R++ ++++AGPPGTGK++ A+ + L GS +++ +++K V
Sbjct: 1091 CTVVRNRT----SIIVAGPPGTGKSSCISALIETLTECSATKHKNTGSPMHTHKLQKAIV 1146
Query: 425 LME 433
M+
Sbjct: 1147 YMD 1149
>SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24)
Length = 569
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 254 LIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTE 406
LI + G L + GP G GK+++ +AI EL + G YS++
Sbjct: 147 LIDNSYFKGELLAIVGPVGAGKSSLLMAILGELPFTEGTITVKGKIAYSSQ 197
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 290 LLAGPPGTGKTAIALAIAQEL 352
++ GPPGTGKT I L +A+ L
Sbjct: 875 VIQGPPGTGKTYIGLKVAKVL 895
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 281 RALLLAGPPGTGKTAIALAIAQEL 352
R LL GPPG GK++ A+A EL
Sbjct: 223 RGYLLYGPPGCGKSSFIQALAGEL 246
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 239 RDSCRLIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFC 373
+DS RL +S +LL GP G+GKT +A IA+ L C
Sbjct: 263 QDSIRLDKSN------ILLLGPTGSGKTLLAQTIARCLDVPFAIC 301
>SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +2
Query: 251 RLIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLM 430
R I+ K + +++ GP G GK+++ L+I E+ + G Y +I + +
Sbjct: 174 RGIKLKAVCDDLVIITGPVGGGKSSLLLSILGEIPLISGSISVRGRIAYFPQIPFGKQME 233
Query: 431 ENFRRAIGLRIRETKE 478
E R IG I + ++
Sbjct: 234 EESREKIGQDISQRED 249
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 242 DSCRLIRSKKMAGR-ALLLAGPPGTGKTAIALAIAQELG 355
D C L ++ + GR GP GTGKT A+ Q+LG
Sbjct: 1835 DRCYLTMTQALEGRLGGSPFGPAGTGKTESVKALGQQLG 1873
>SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6)
Length = 486
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 266 KKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPM 379
KK G +L ++G PGTGKTA + +++ +V CP+
Sbjct: 232 KKKPG-SLYISGAPGTGKTACLTMVIRDM-KEVSDCPV 267
>SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTK 361
+L+ G PGTGK+ + +A LG K
Sbjct: 11 ILITGTPGTGKSTTGVELANRLGFK 35
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 293 LAGPPGTGKTAIALAIAQEL 352
L GPPGTGKT L +A+ L
Sbjct: 869 LEGPPGTGKTTSILCLARAL 888
>SB_56370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 505 NTVETENPGWRLWKNSISCDHRTKNGQ 585
N +E ++P W+LWK+ ++ H T +G+
Sbjct: 117 NDIEGDDP-WQLWKDMVTSRHLTPSGK 142
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 239 RDSCRLIRSKKMAGRALLLAGPPGTGKTAIA-LAIAQELGTKVPFCPMVGSEVY 397
R RL + + LLL P G GKT +A L I +E+G + + +E +
Sbjct: 1115 RIQSRLCETALNSDENLLLCAPTGAGKTNVALLTILREIGKHINLDGTINTEEF 1168
>SB_56551| Best HMM Match : Fe_hyd_lg_C (HMM E-Value=0.0049)
Length = 113
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 167 PQAFYMTVSRDPLRFSCAFHFFNFHVESSFTLLN 66
P YM R P R F+FF F + + T LN
Sbjct: 4 PSKAYMQTRRFPKRHISIFNFFTFSCKQAVTFLN 37
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 269 KMAGRALL-LAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI 409
K+ G L+ + GP G+GK+++ LAI E+ + G VY ++
Sbjct: 270 KLKGSRLIGITGPCGSGKSSLLLAILNEMSLISGEAVVQGETVYVPQV 317
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 239 RDSCRLIRSKKMAGRALLLAGPPGTGKTAIALAIA 343
R+ + I K G L L GP G+GKT + +A
Sbjct: 22 REILKTINGKVRPGEMLALMGPSGSGKTTLLNVLA 56
>SB_58257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 269 SYFLSIYNYPCSLTCRLLTHETGCHLNR 186
SY LSI+ Y +LL H+ GC ++R
Sbjct: 216 SYPLSIFGYSRQTQRKLLRHKRGCRVHR 243
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVG 385
++L GP G GK+++ +AI E+ K F +G
Sbjct: 589 VILTGPVGGGKSSLLMAILGEIPLKRGFIKAIG 621
>SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27)
Length = 514
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 272 MAGRALLLAGPPGTGKTAIALAIAQEL 352
++ R ++ GPPG GKT + + I Q L
Sbjct: 388 LSNRLAIVQGPPGCGKTFLGVKIVQLL 414
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 242 DSCRL--IRSKKMAGRALLLAGPPGTGKTAIALAIAQEL 352
DSC L + AG +++ GP G+GK+ + + I EL
Sbjct: 471 DSCTLQGVSFAAGAGDLVIITGPVGSGKSTLLMTIQGEL 509
>SB_16789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 518 QKILAGGYGKTVSHVIIGLKTAKGTKQLKLDPTIYE 625
+ ++A GY S +I L T G + LDP+I E
Sbjct: 154 RNMVAAGYALYGSATVIVLSTGNGVNEFTLDPSIGE 189
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 287 LLLAGPPGTGKTAIALAIAQEL 352
+++AGPPGTGK++ A+ + L
Sbjct: 2 IIVAGPPGTGKSSCISALIETL 23
>SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 166 GWMKMVFLFKWQPVSWV 216
G++K FLF+++P SWV
Sbjct: 9 GYIKAYFLFEYEPTSWV 25
>SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 293 LAGPPGTGKTAIALAIAQELGTKVP 367
+ GPPGTGKT +A+ I + P
Sbjct: 590 VVGPPGTGKTDVAVQIISNIYHNFP 614
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,328,309
Number of Sequences: 59808
Number of extensions: 436836
Number of successful extensions: 1364
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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