Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060458.seq
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.13 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   4.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 286 SSPGHFLTSYQSTTIPAASRADS*PTRPAAI 194
           S+P    T+  +TT+PAAS   + P  P+A+
Sbjct: 214 STPATVTTTGATTTLPAASATGTGPATPSAV 244


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 527 GFSVSTVLTQLLHPHILLWF 468
           GFS S+V   LL P ++L+F
Sbjct: 8   GFSASSVFLSLLIPALILYF 27


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 470 TKEVYEGEVTELTLLKQKILAGGYGKTVSHVII 568
           TKEV  G  +E+T +++  L    G  V  +I+
Sbjct: 213 TKEVATGTASEITQIQEATLVYKDGTNVMGMIV 245


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 139 EILCVLAVLFTSSIFMLKAALLF 71
           EILC +AVLF +  + L +   F
Sbjct: 6   EILCGIAVLFLALYYYLTSTFDF 28


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 428 LIPLFS*SLCCKLHYQPLDRKEP*FQVPERWQ 333
           LI  FS     K HY   D K   FQV  +W+
Sbjct: 8   LILYFSIVCQAKAHYSLRDFKANIFQVKYQWK 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,951
Number of Sequences: 438
Number of extensions: 4293
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)