Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060455.seq
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    25   2.2  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   5.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.8  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 456 SRVTVRGLYLFYLCFGTDLPSSG 388
           SR+ V G++LFYL F    P +G
Sbjct: 35  SRIRVGGIFLFYLIFLVIPPLTG 57


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 285 EQLESEADGDFDDADMSNLDDDRQAPPPMLNDLAFLMTG-GRY 410
           E  E E +GD  + D  + DD+  A P   +D+  +  G G+Y
Sbjct: 485 EDEEDEYEGDDTEEDEEDEDDELAAGPLGTSDVVTVEDGDGQY 527


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 348 HRPSCSYLHRQNHHPLHSPI 289
           H P     H   HHP H P+
Sbjct: 127 HLPHVQQHHPSVHHPAHHPL 146


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 324 HRQNHHPLHSPIAL*NH*HNM 262
           H  +HHP  + +A  +H HN+
Sbjct: 507 HHHHHHPTAADLAGYHHQHNV 527


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,171
Number of Sequences: 2352
Number of extensions: 13948
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)