Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060455.seq
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78415-4|CAB01673.2|  281|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    29   3.0  
U40029-12|AAA81131.1|  785|Caenorhabditis elegans Temporarily as...    28   5.3  
Z82266-17|CAJ80813.1|  446|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z82266-16|CAJ80812.1|  423|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z82266-15|CAD36491.1|  608|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z82266-14|CAD36490.1|  467|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z82266-10|CAJ80811.1|  331|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z68213-11|CAJ80817.1|  446|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z68213-10|CAJ80816.1|  423|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z68213-9|CAD37352.1|  608|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z68213-8|CAA92439.3|  467|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z92773-4|CAB07130.2|  584|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z81114-8|CAB97236.1|  584|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z78415-4|CAB01673.2|  281|Caenorhabditis elegans Hypothetical
           protein C17G1.5 protein.
          Length = 281

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 401 RSVPKHR*KRYNPRTVTLDDGSREAGHWCYNC 496
           RS P         ++V + DG  +  HWCY C
Sbjct: 107 RSKPSFEMSSLTRKSVEISDGIDDDDHWCYYC 138


>Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical
           protein W04G3.5 protein.
          Length = 353

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 GDFDDADMSNLDDDRQAPPPMLNDLAFL 392
           G+  D + S L+D RQ+PPP +    FL
Sbjct: 200 GEQKDEEESGLEDGRQSPPPNVTSYDFL 227


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
           protein Y108G3AL.7 protein.
          Length = 1192

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 181 VERRPTLRFFCHRCDIEFEDV 243
           +ER    R F  RCDIE+ED+
Sbjct: 504 IERGTEKRTFAERCDIEYEDI 524


>U40029-12|AAA81131.1|  785|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 151 protein.
          Length = 785

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 294 ESEADGDFDDADMSNLDDDRQAPPPM 371
           E ++D D DD+D   ++DD +   PM
Sbjct: 384 EEDSDEDMDDSDNEEVEDDSEEEEPM 409


>Z82266-17|CAJ80813.1|  446|Caenorhabditis elegans Hypothetical
           protein C01F6.6d protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 424 MKNRKHHLHEMSLNEKYQLV 443


>Z82266-16|CAJ80812.1|  423|Caenorhabditis elegans Hypothetical
           protein C01F6.6c protein.
          Length = 423

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 401 MKNRKHHLHEMSLNEKYQLV 420


>Z82266-15|CAD36491.1|  608|Caenorhabditis elegans Hypothetical
           protein C01F6.6b protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 586 MKNRKHHLHEMSLNEKYQLV 605


>Z82266-14|CAD36490.1|  467|Caenorhabditis elegans Hypothetical
           protein C01F6.6a protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 445 MKNRKHHLHEMSLNEKYQLV 464


>Z82266-10|CAJ80811.1|  331|Caenorhabditis elegans Hypothetical
           protein C01F6.6e protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 309 MKNRKHHLHEMSLNEKYQLV 328


>Z68213-11|CAJ80817.1|  446|Caenorhabditis elegans Hypothetical
           protein C01F6.6d protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 424 MKNRKHHLHEMSLNEKYQLV 443


>Z68213-10|CAJ80816.1|  423|Caenorhabditis elegans Hypothetical
           protein C01F6.6c protein.
          Length = 423

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 401 MKNRKHHLHEMSLNEKYQLV 420


>Z68213-9|CAD37352.1|  608|Caenorhabditis elegans Hypothetical
           protein C01F6.6b protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 586 MKNRKHHLHEMSLNEKYQLV 605


>Z68213-8|CAA92439.3|  467|Caenorhabditis elegans Hypothetical
           protein C01F6.6a protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 84  VENLKHNL*ELSLNNKYLLV 143
           ++N KH+L E+SLN KY LV
Sbjct: 445 MKNRKHHLHEMSLNEKYQLV 464


>Z92773-4|CAB07130.2|  584|Caenorhabditis elegans Hypothetical
           protein W08E3.2 protein.
          Length = 584

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 270 ASGFIEQLESEA--DGDFDDADMSNLDDDRQAPPP 368
           + G  E+ E EA  DG  D  + SNLDDD+    P
Sbjct: 56  SGGDSEEKEDEAAEDGPEDGEEKSNLDDDQNVENP 90


>Z81114-8|CAB97236.1|  584|Caenorhabditis elegans Hypothetical
           protein W08E3.2 protein.
          Length = 584

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 270 ASGFIEQLESEA--DGDFDDADMSNLDDDRQAPPP 368
           + G  E+ E EA  DG  D  + SNLDDD+    P
Sbjct: 56  SGGDSEEKEDEAAEDGPEDGEEKSNLDDDQNVENP 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,788,353
Number of Sequences: 27780
Number of extensions: 291234
Number of successful extensions: 754
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)