Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060454.seq
(308 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 66 2e-11
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 66 2e-11
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 66 2e-11
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 66 2e-11
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 66 2e-11
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 66 2e-11
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 66 2e-11
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 65 5e-11
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 65 5e-11
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 65 5e-11
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 65 5e-11
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 65 5e-11
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 65 5e-11
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 65 5e-11
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 65 5e-11
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 65 5e-11
BC107880-1|AAI07881.1| 742|Homo sapiens ZMYM6 protein protein. 30 1.6
BC033903-1|AAH33903.1| 975|Homo sapiens ZMYM6 protein protein. 30 1.6
AL607089-1|CAI12897.1| 1325|Homo sapiens zinc finger, MYM-type 6... 30 1.6
AF055470-1|AAD15797.1| 723|Homo sapiens ZNF258 protein. 30 1.6
Z92544-4|CAM26350.1| 373|Homo sapiens rhomboid, veinlet-like 1 ... 28 4.8
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 28 4.8
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 28 4.8
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 28 4.8
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 28 4.8
AJ272344-1|CAC00640.1| 373|Homo sapiens rhomboid-related protei... 28 4.8
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 28 4.8
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQGRRRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQGRRRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQGRRRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQGRRRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQGRRRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQGRRRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQGRRRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +3
Query: 87 NVPKQRRTYCXXXXXXXXXXXXXXXXXXXRHAAQGRRRYDRKQQGYGGQSKPIFKKRQKP 266
NVPK RRT+C AQG+RRYDRKQ GYGGQ+KPIF+K+ K
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 267 LRKL 278
+K+
Sbjct: 63 TKKI 66
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 248 QKEAKTTKKIVLRLECAD 301
+K+AKTTKKIVLRLEC +
Sbjct: 57 RKKAKTTKKIVLRLECVE 74
>BC107880-1|AAI07881.1| 742|Homo sapiens ZMYM6 protein protein.
Length = 742
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 129 IYIFCSTSCAVLVRSXFLSSXGTXSTNV 46
IY FCS+SC V ++ F GT S+ V
Sbjct: 341 IYSFCSSSCVVAFQNVFSKPKGTNSSAV 368
>BC033903-1|AAH33903.1| 975|Homo sapiens ZMYM6 protein protein.
Length = 975
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 129 IYIFCSTSCAVLVRSXFLSSXGTXSTNV 46
IY FCS+SC V ++ F GT S+ V
Sbjct: 341 IYSFCSSSCVVAFQNVFSKPKGTNSSAV 368
>AL607089-1|CAI12897.1| 1325|Homo sapiens zinc finger, MYM-type 6
protein.
Length = 1325
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 129 IYIFCSTSCAVLVRSXFLSSXGTXSTNV 46
IY FCS+SC V ++ F GT S+ V
Sbjct: 341 IYSFCSSSCVVAFQNVFSKPKGTNSSAV 368
>AF055470-1|AAD15797.1| 723|Homo sapiens ZNF258 protein.
Length = 723
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 129 IYIFCSTSCAVLVRSXFLSSXGTXSTNV 46
IY FCS+SC V ++ F GT S+ V
Sbjct: 341 IYSFCSSSCVVAFQNVFSKPKGTNSSAV 368
>Z92544-4|CAM26350.1| 373|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 373
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 276 IFLVVFASF*RWVWTDHRNPAVYDHNVFYPGQRAXPWTFXT 154
+FL A +WV + + V++PG RA W F T
Sbjct: 145 VFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLT 185
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 276 IFLVVFASF*RWVWTDHRNPAVYDHNVFYPGQRAXPWTFXT 154
+FL A +WV + + V++PG RA W F T
Sbjct: 210 VFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLT 250
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 276 IFLVVFASF*RWVWTDHRNPAVYDHNVFYPGQRAXPWTFXT 154
+FL A +WV + + V++PG RA W F T
Sbjct: 210 VFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLT 250
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 276 IFLVVFASF*RWVWTDHRNPAVYDHNVFYPGQRAXPWTFXT 154
+FL A +WV + + V++PG RA W F T
Sbjct: 210 VFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLT 250
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 276 IFLVVFASF*RWVWTDHRNPAVYDHNVFYPGQRAXPWTFXT 154
+FL A +WV + + V++PG RA W F T
Sbjct: 210 VFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLT 250
>AJ272344-1|CAC00640.1| 373|Homo sapiens rhomboid-related protein
protein.
Length = 373
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 276 IFLVVFASF*RWVWTDHRNPAVYDHNVFYPGQRAXPWTFXT 154
+FL A +WV + + V++PG RA W F T
Sbjct: 145 VFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLT 185
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 276 IFLVVFASF*RWVWTDHRNPAVYDHNVFYPGQRAXPWTFXT 154
+FL A +WV + + V++PG RA W F T
Sbjct: 210 VFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLT 250
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,951,579
Number of Sequences: 237096
Number of extensions: 524841
Number of successful extensions: 950
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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