Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060453.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -2

Query: 118 SIPKDCALNFQ--QKFNNRHFFEHSQSMD 38
           +IPKDC +N Q     +N + F   +  D
Sbjct: 380 TIPKDCMVNLQIYDMHHNPNVFPDPEKFD 408


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -2

Query: 118 SIPKDCALNFQ--QKFNNRHFFEHSQSMD 38
           +IPKDC +N Q     +N + F   +  D
Sbjct: 380 TIPKDCMVNLQIYDMHHNPNVFPDPEKFD 408


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 479 ALVLQLLVHHCTCRSTWETMFLE 547
           +L   +LVH  T RST+   F++
Sbjct: 84  SLCKAILVHAITIRSTFSWTFID 106


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 372 HWWWCLAIIVQVAHICIVKITXRFTLQLLY 283
           H  +C A I    H+  +     FTL LL+
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCLDYFTLHLLF 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,688
Number of Sequences: 336
Number of extensions: 3523
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)