Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060453.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    25   2.2  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   6.8  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   6.8  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   6.8  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    23   9.0  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 457 SRVTVRGLYLFYLCFGTDLPSSG 389
           SR+ V G++LFYL F    P +G
Sbjct: 35  SRIRVGGIFLFYLIFLVIPPLTG 57


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +1

Query: 598 LRGLLLYHGDQLXAFTTGGYSPEDSMAA 681
           L  +LLYH      FT  GY   D M A
Sbjct: 542 LAAILLYHIATYETFTFNGYVYPDGMYA 569


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +1

Query: 598 LRGLLLYHGDQLXAFTTGGYSPEDSMAA 681
           L  +LLYH      FT  GY   D M A
Sbjct: 542 LAAILLYHIATYETFTFNGYVYPDGMYA 569


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 508 LYLSEHLGDYVFGGEGLDAVVTQLLGQFGELRGLL 612
           L+L EH G    G + +D+ ++ LLG    + G+L
Sbjct: 461 LWLQEHPGAIQTGNQTVDSTLSVLLGMTILVGGVL 495


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 508 LYLSEHLGDYVFGGEGLDAVVTQLLG 585
           L+L EH G    G + +D+ ++ LLG
Sbjct: 47  LWLQEHPGAIQTGNQTVDSTLSVLLG 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,660
Number of Sequences: 2352
Number of extensions: 13910
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)