Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060453.seq
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064903-1|AAH64903.1| 304|Homo sapiens zinc finger protein 364... 36 0.10
BC054049-1|AAH54049.1| 304|Homo sapiens zinc finger protein 364... 36 0.10
AL390725-6|CAI13717.1| 304|Homo sapiens zinc finger protein 364... 36 0.10
AL079314-1|CAB45280.1| 232|Homo sapiens hypothetical protein, s... 36 0.10
AF542552-1|AAQ09535.1| 304|Homo sapiens zinc finger protein 364... 36 0.10
AF419857-1|AAP97292.1| 304|Homo sapiens hypothetical protein pr... 36 0.10
BC025374-1|AAH25374.1| 311|Homo sapiens ring finger protein 126... 34 0.41
BC001442-1|AAH01442.1| 326|Homo sapiens ring finger protein 126... 34 0.41
AL360265-1|CAB96178.1| 163|Homo sapiens AK000559 hypothetical p... 34 0.41
AK000559-1|BAA91254.1| 311|Homo sapiens protein ( Homo sapiens ... 34 0.41
AY299089-1|AAP59414.1| 444|Homo sapiens SPRED1 protein. 30 8.9
AK091222-1|BAC03614.1| 444|Homo sapiens protein ( Homo sapiens ... 30 8.9
>BC064903-1|AAH64903.1| 304|Homo sapiens zinc finger protein 364
protein.
Length = 304
Score = 36.3 bits (80), Expect = 0.10
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 514 LSEHLGDYVFGGEGLDAVVTQLLGQ 588
L + GDY +G GLDA+VTQLLGQ
Sbjct: 171 LHSNPGDYAWGQTGLDAIVTQLLGQ 195
>BC054049-1|AAH54049.1| 304|Homo sapiens zinc finger protein 364
protein.
Length = 304
Score = 36.3 bits (80), Expect = 0.10
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 514 LSEHLGDYVFGGEGLDAVVTQLLGQ 588
L + GDY +G GLDA+VTQLLGQ
Sbjct: 171 LHSNPGDYAWGQTGLDAIVTQLLGQ 195
>AL390725-6|CAI13717.1| 304|Homo sapiens zinc finger protein 364
protein.
Length = 304
Score = 36.3 bits (80), Expect = 0.10
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 514 LSEHLGDYVFGGEGLDAVVTQLLGQ 588
L + GDY +G GLDA+VTQLLGQ
Sbjct: 171 LHSNPGDYAWGQTGLDAIVTQLLGQ 195
>AL079314-1|CAB45280.1| 232|Homo sapiens hypothetical protein,
similar to (U06944) PRAJA1 [Mus musculus] protein.
Length = 232
Score = 36.3 bits (80), Expect = 0.10
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 514 LSEHLGDYVFGGEGLDAVVTQLLGQ 588
L + GDY +G GLDA+VTQLLGQ
Sbjct: 99 LHSNPGDYAWGQTGLDAIVTQLLGQ 123
>AF542552-1|AAQ09535.1| 304|Homo sapiens zinc finger protein 364
protein.
Length = 304
Score = 36.3 bits (80), Expect = 0.10
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 514 LSEHLGDYVFGGEGLDAVVTQLLGQ 588
L + GDY +G GLDA+VTQLLGQ
Sbjct: 171 LHSNPGDYAWGQTGLDAIVTQLLGQ 195
>AF419857-1|AAP97292.1| 304|Homo sapiens hypothetical protein
protein.
Length = 304
Score = 36.3 bits (80), Expect = 0.10
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 514 LSEHLGDYVFGGEGLDAVVTQLLGQ 588
L + GDY +G GLDA+VTQLLGQ
Sbjct: 171 LHSNPGDYAWGQTGLDAIVTQLLGQ 195
>BC025374-1|AAH25374.1| 311|Homo sapiens ring finger protein 126
protein.
Length = 311
Score = 34.3 bits (75), Expect = 0.41
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 532 DYVFGGEGLDAVVTQLLGQF 591
DY +G GLDA++TQLL QF
Sbjct: 178 DYAWGANGLDAIITQLLNQF 197
Score = 33.1 bits (72), Expect = 0.95
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 253 FTCPYCASGFIEQLESEAXGDFDDADMSNLDDDRQAPP 366
+ CP C SGFIE+L E + + S D+ PP
Sbjct: 27 YICPRCESGFIEELPEETRSTENGSAPSTAPTDQSRPP 64
>BC001442-1|AAH01442.1| 326|Homo sapiens ring finger protein 126
protein.
Length = 326
Score = 34.3 bits (75), Expect = 0.41
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 532 DYVFGGEGLDAVVTQLLGQF 591
DY +G GLDA++TQLL QF
Sbjct: 178 DYAWGANGLDAIITQLLNQF 197
Score = 33.1 bits (72), Expect = 0.95
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 253 FTCPYCASGFIEQLESEAXGDFDDADMSNLDDDRQAPP 366
+ CP C SGFIE+L E + + S D+ PP
Sbjct: 27 YICPRCESGFIEELPEETRSTENGSAPSTAPTDQSRPP 64
>AL360265-1|CAB96178.1| 163|Homo sapiens AK000559 hypothetical
protein, similar to (U06944) PRAJA1 [Mus musculus]
protein.
Length = 163
Score = 34.3 bits (75), Expect = 0.41
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 532 DYVFGGEGLDAVVTQLLGQF 591
DY +G GLDA++TQLL QF
Sbjct: 30 DYAWGANGLDAIITQLLNQF 49
>AK000559-1|BAA91254.1| 311|Homo sapiens protein ( Homo sapiens
cDNA FLJ20552 fis, clone KAT11732. ).
Length = 311
Score = 34.3 bits (75), Expect = 0.41
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 532 DYVFGGEGLDAVVTQLLGQF 591
DY +G GLDA++TQLL QF
Sbjct: 178 DYAWGANGLDAIITQLLNQF 197
Score = 33.1 bits (72), Expect = 0.95
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 253 FTCPYCASGFIEQLESEAXGDFDDADMSNLDDDRQAPP 366
+ CP C SGFIE+L E + + S D+ PP
Sbjct: 27 YICPRCESGFIEELPEETRSTENGSAPSTAPTDQSRPP 64
>AY299089-1|AAP59414.1| 444|Homo sapiens SPRED1 protein.
Length = 444
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 238 RCFAGFTCPYCASGFIEQLESEAXGDFDDADMSNLDDDR 354
RC +C CA + S++ GDF D + DD+
Sbjct: 361 RCIYQVSCMLCAESMLYHCMSDSEGDFSDPCSCDTSDDK 399
>AK091222-1|BAC03614.1| 444|Homo sapiens protein ( Homo sapiens
cDNA FLJ33903 fis, clone CTONG2008398, weakly similar to
VASODILATOR-STIMULATED PHOSPHOPROTEIN. ).
Length = 444
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 238 RCFAGFTCPYCASGFIEQLESEAXGDFDDADMSNLDDDR 354
RC +C CA + S++ GDF D + DD+
Sbjct: 361 RCIYQVSCMLCAESMLYHCMSDSEGDFSDPCSCDTSDDK 399
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,563,251
Number of Sequences: 237096
Number of extensions: 2068791
Number of successful extensions: 4297
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4297
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -