Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060452.seq
(620 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0391 - 2805999-2806168,2806782-2806962,2807294-2807626,280... 62 3e-10
10_08_0741 + 20235463-20235497,20237624-20237753,20238748-202389... 58 7e-09
08_01_0374 + 3301301-3301521,3301723-3301852,3301895-3301903,330... 56 3e-08
03_02_0608 - 9818020-9818192,9818723-9818906,9818991-9819323,981... 54 1e-07
06_03_1271 + 28883904-28884326,28885556-28886242 49 3e-06
06_03_1337 + 29434240-29434449,29434504-29434675,29435067-294351... 48 5e-06
05_07_0224 + 28500745-28500978,28501933-28502332,28502416-285024... 46 2e-05
02_01_0368 - 2643310-2643999,2645043-2645468,2645694-2645759 46 3e-05
01_05_0782 - 25148733-25149166,25149252-25149415,25149636-251496... 45 4e-05
02_01_0278 - 1851338-1851412,1851579-1851819,1851946-1852047,185... 44 7e-05
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 42 3e-04
01_06_0168 + 27165323-27165373,27166659-27167067,27167666-271677... 41 7e-04
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 40 0.002
05_07_0262 + 28769335-28769391,28769732-28769855,28770175-287702... 40 0.002
04_04_0786 - 28052981-28053040,28053123-28053222,28053447-280535... 31 0.56
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 31 0.97
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 30 1.3
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 30 1.7
05_04_0193 + 18939869-18939988,18940714-18941012,18941078-189411... 30 1.7
10_01_0319 - 3504800-3505315,3505575-3505769 29 2.3
03_01_0125 + 977572-977879,978155-978275,979673-979846,979985-98... 29 3.9
08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271 28 5.2
07_03_0043 - 12741661-12741816,12741980-12742153,12742870-127429... 28 6.9
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 28 6.9
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 28 6.9
04_03_0211 - 12694217-12694318,12695119-12695256,12695470-12695628 28 6.9
03_01_0061 + 490037-490045,490121-490302,490551-490671,491933-49... 28 6.9
02_03_0347 - 17999780-18000592,18000656-18003019 28 6.9
05_02_0114 + 6753868-6754126,6754225-6754592,6754704-6754992,675... 27 9.1
03_06_0148 + 31982976-31984097 27 9.1
>06_01_0391 -
2805999-2806168,2806782-2806962,2807294-2807626,
2808686-2808823,2811381-2811510,2811598-2811842
Length = 398
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 8 RRDFREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPV-SAPYDQ 184
R+ F E F +PLAI+ D +RIT E ALAH YLA D +DEPV S+P+
Sbjct: 311 RQSFPEKFPHVHPLAIDLVEKMLTFDPRQRITVEGALAHPYLASLHDISDEPVCSSPFSF 370
Query: 185 SFEDMELPVDKWKELVWKEVVEFS 256
FE L ++ K+L+++E + F+
Sbjct: 371 DFEQHALSEEQMKDLIYQEGLAFN 394
>10_08_0741 +
20235463-20235497,20237624-20237753,20238748-20238915,
20239097-20239429,20239647-20239830,20239904-20240076
Length = 340
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 8 RRDFREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPV-SAPYDQ 184
R+DFR FR + A++ D +RIT ++AL H YLA D +EP AP+
Sbjct: 252 RQDFRLRFRNMSAGAVDLLEKMLVFDPSRRITVDEALHHPYLASLHDINEEPTCPAPFSF 311
Query: 185 SFEDMELPVDKWKELVWKEVVEFS 256
FE + KEL+W+E + F+
Sbjct: 312 DFEQPSFTEEHIKELIWRESLAFN 335
>08_01_0374 +
3301301-3301521,3301723-3301852,3301895-3301903,
3302349-3302486,3302616-3302948,3303280-3303463,
3303647-3303819
Length = 395
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 8 RRDFREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPV-SAPYDQ 184
++ FR F + A++ D KRIT ++AL H YLA + DEPV AP+
Sbjct: 307 KQQFRARFPTMSSGAMDLLERMLVFDPSKRITVDEALCHPYLASLHEIYDEPVCPAPFSF 366
Query: 185 SFEDMELPVDKWKELVWKEVVEFS 256
FE L + KE++W+E ++F+
Sbjct: 367 DFEQPSLTEEDIKEIIWREALKFN 390
>03_02_0608 -
9818020-9818192,9818723-9818906,9818991-9819323,
9819455-9819592,9819707-9819836,9820151-9820266
Length = 357
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 8 RRDFREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVS-APYDQ 184
RR F +F P A++ + +RIT E+AL H YL + D DEP+ P+
Sbjct: 269 RRTFASMFPRVQPAALDLIERMLTFNPLQRITVEEALDHPYLERLHDIADEPICLEPFSF 328
Query: 185 SFEDMELPVDKWKELVWKEVVEFS 256
FE L D+ K+L++ E +E +
Sbjct: 329 DFEQKALNEDQMKQLIFNEAIEMN 352
>06_03_1271 + 28883904-28884326,28885556-28886242
Length = 369
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 ANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPT-DEPVSAPYDQSFEDMELPVD 214
A+PLAI+ D KRI+ +AL H Y++ DP+ + P P D D L VD
Sbjct: 288 AHPLAIDLLQKMLVFDPSKRISVTEALEHPYMSPLYDPSANPPAQVPIDLDI-DENLGVD 346
Query: 215 KWKELVWKEVVEF 253
+E++W+E++ +
Sbjct: 347 MIREMMWQEMLHY 359
>06_03_1337 +
29434240-29434449,29434504-29434675,29435067-29435152,
29435351-29435759,29435893-29436020,29436094-29436153,
29436501-29436650,29436771-29436926,29437045-29437182,
29437270-29437343,29437752-29437853,29437951-29438191,
29438651-29438668
Length = 647
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAPYDQ---S 187
F + FR +PLA+ D R +AE+ALA Y A A+ EP P +
Sbjct: 426 FSQKFRNTDPLALRLLERLLAFDPKDRSSAEEALADPYFASLANVEREPSRHPISKLEFE 485
Query: 188 FEDMELPVDKWKELVWKEVVEF 253
FE +L D +EL+++E++E+
Sbjct: 486 FERRKLTKDDVRELIYREILEY 507
>05_07_0224 +
28500745-28500978,28501933-28502332,28502416-28502480,
28502633-28502692,28502865-28503014,28503386-28503541,
28503648-28503785,28503874-28503947,28504172-28504273,
28505415-28505604,28505756-28505830
Length = 547
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +2
Query: 8 RRDFREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAPYDQ- 184
R F + F G +P+A++ D R +AE+AL Y A+ EP++ P +
Sbjct: 321 RVPFTKKFPGVDPMALHLLERLLAFDPKDRPSAEEALTDPYFNGLANSEREPIAQPISKL 380
Query: 185 --SFEDMELPVDKWKELVWKEVVEF 253
FE +L D +EL+++E++E+
Sbjct: 381 EFEFEKRKLAKDDVRELIYREILEY 405
>02_01_0368 - 2643310-2643999,2645043-2645468,2645694-2645759
Length = 393
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 ANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPT-DEPVSAPYDQSFEDMELPVD 214
A+PLAI+ D KRI+ +AL H Y++ DP+ + P P D D + D
Sbjct: 311 AHPLAIDLLQKMLIFDPTKRISVTEALEHPYMSPLYDPSANPPAQVPIDLDI-DENISAD 369
Query: 215 KWKELVWKEVVEF 253
+E++W E++ +
Sbjct: 370 MIREMMWHEMLHY 382
>01_05_0782 -
25148733-25149166,25149252-25149415,25149636-25149664,
25150049-25150109,25150264-25150475,25150587-25150742,
25150837-25150986,25151486-25151545,25151653-25151780,
25152399-25152807,25153087-25153106,25153916-25154048
Length = 651
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAPYDQ---S 187
F + F A+PLA++ D R TAE+ALAH Y A EP P +
Sbjct: 321 FSQKFPSADPLALDLLQKLLAFDPKDRPTAEEALAHPYFKGLAKVEREPSCQPITKMEFE 380
Query: 188 FEDMELPVDKWKELVWKEVVEF 253
FE + + +EL+++E++E+
Sbjct: 381 FERRRVTKEDIRELIFREILEY 402
>02_01_0278 -
1851338-1851412,1851579-1851819,1851946-1852047,
1852291-1852364,1852455-1852592,1852848-1853003,
1853364-1853513,1853808-1853867,1853946-1854073,
1854209-1854617,1855571-1855628,1856435-1856493,
1857478-1857606,1857765-1857774,1858134-1858183,
1858633-1858854
Length = 686
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAP---YDQS 187
F F A+PLA+ D R TAE+ALA Y + + EP P ++
Sbjct: 446 FSHKFHNADPLALRLLERLLAFDPKDRPTAEEALADPYFRGISKLSREPSRLPVSKFEFE 505
Query: 188 FEDMELPVDKWKELVWKEVVEF 253
FE +L D +E++++E++E+
Sbjct: 506 FERRKLTKDDVREMIYREILEY 527
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAPYDQ---S 187
F + F A+PLA+ D R +AE+ALA Y A+ EP + P +
Sbjct: 251 FTQKFPNADPLAMRLLERMLAFDPKDRPSAEEALADPYFKNIANVDREPSAQPITKLEFE 310
Query: 188 FEDMELPVDKWKELVWKEVVEF 253
FE + + +EL+++E++E+
Sbjct: 311 FERRRITKEDIRELIYREILEY 332
>01_06_0168 +
27165323-27165373,27166659-27167067,27167666-27167793,
27167905-27167964,27169126-27169275,27169358-27169513,
27169643-27169854,27169983-27170084,27170351-27170430,
27170515-27170939
Length = 590
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAPYDQ---S 187
F E F A+P A+ D R TAE+ALA Y A EP P +
Sbjct: 287 FSERFPKADPAALKLLQRLLAFDPKDRPTAEEALADPYFKGLAKAEREPSCQPITKMEFE 346
Query: 188 FEDMELPVDKWKELVWKEVVEF 253
FE ++ + KEL+++E++E+
Sbjct: 347 FERRKVTKEDVKELIFREILEY 368
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAPYDQ---S 187
F + F A+PLA+ + R AE+ALA Y A+ EP + P +
Sbjct: 156 FTQKFPNADPLALRLLERMLSFEPKDRPNAEEALADPYFRNIANVDREPSAQPVTKLEFE 215
Query: 188 FEDMELPVDKWKELVWKEVVEF 253
FE + + +EL++++++E+
Sbjct: 216 FERRRITKEDIRELIYRDILEY 237
>05_07_0262 +
28769335-28769391,28769732-28769855,28770175-28770266,
28770673-28771078,28772057-28772184,28772273-28772332,
28772814-28772963,28772999-28773061,28773062-28773217,
28773361-28773572,28773698-28773796,28774343-28774512,
28774592-28775040
Length = 721
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAP---YDQS 187
F + F A+PLA+ D R TAE+AL Y + EP P +
Sbjct: 381 FSQKFPNADPLALKLLQRLLAFDPKDRPTAEEALTDPYFKGLSKIDREPSCQPIRKLEFE 440
Query: 188 FEDMELPVDKWKELVWKEVVEF 253
FE +L + +EL+++E++E+
Sbjct: 441 FEQKKLSKEDIRELIFQEILEY 462
>04_04_0786 -
28052981-28053040,28053123-28053222,28053447-28053574,
28053654-28053821,28053901-28054013,28054135-28054287,
28054385-28054528,28054794-28055529
Length = 533
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 83 DADKRITAEQALAHEYLAQYADPTDEPVSAPYDQSFEDMELPVDKWKELVWKEVVE 250
D KRITA QAL H +L + +D P+ + + + ++K K+L K + E
Sbjct: 333 DPQKRITASQALEHRWLKE-GGASDRPIDSAVLSRMKQFK-AMNKLKQLALKVIAE 386
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 30.7 bits (66), Expect = 0.97
Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 25 GVPRREPTRHQPAGTDARTGCR*THNGRTSARARVLGSVRGPDRRAGFCALRPE-LRRHG 201
G +R R A AR CR GR + A V R P R G RPE RR G
Sbjct: 657 GAGQRRGRRGAGARPAARGRCRRGRRGRAAGGATVSAEARAP-RDGGAATRRPEQQRRIG 715
Query: 202 AACRQVERAGVERS 243
+ GV RS
Sbjct: 716 RRGGWIVGGGVRRS 729
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 8 RRDFREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTD-EPVSAP-YD 181
+R +E F+ + LA++ D +RI+A+ AL EY ++DP +P S P Y+
Sbjct: 274 KRRVKEYFKHFDRLALDLLEKMLTLDPAQRISAQDALDAEYF--WSDPLPCDPKSLPKYE 331
Query: 182 QSFE 193
S E
Sbjct: 332 SSHE 335
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 110 VLPLCVYRHPVRASVPAG*WRVGSRRGTPRGSRVSC 3
++PLC +R +R+ P+ R GSR +P SR C
Sbjct: 353 IVPLCRHRRAMRSRSPSKRRRHGSRGRSPPSSRHGC 388
>05_04_0193 +
18939869-18939988,18940714-18941012,18941078-18941186,
18941874-18941999,18942178-18942218,18942614-18942744,
18943218-18943291,18944215-18944450,18944543-18944863,
18945023-18945086
Length = 506
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 20 REVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAP 175
R +F A+ A++ D RITA+QAL H Y PT +P P
Sbjct: 344 RSLFPMASDDALDLLSRMFTYDPKARITAQQALEHRYFLSVPAPT-KPSQLP 394
>10_01_0319 - 3504800-3505315,3505575-3505769
Length = 236
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 83 DADKRITAEQALAHEYLAQYAD 148
D DKR+TAE AL H + + AD
Sbjct: 202 DGDKRMTAEAALEHRWFTEEAD 223
>03_01_0125 +
977572-977879,978155-978275,979673-979846,979985-980148,
980245-980332,980426-980479,980571-980651,980895-981068
Length = 387
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 11 RDFREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEY 130
+D + +P ++ + +KRITA QAL HEY
Sbjct: 285 QDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEY 324
>08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271
Length = 450
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/57 (21%), Positives = 29/57 (50%)
Frame = +2
Query: 143 ADPTDEPVSAPYDQSFEDMELPVDKWKELVWKEVVEFSRIRST*IPWSR*TXRNLQQ 313
+D + E + D S E++ + ++W E+ KE E +++ T + W + +++
Sbjct: 64 SDYSIEDILKILDMSEEELAVVKEEWAEMEAKEKEEAPKVKETMVEWEARVKKRIEE 120
>07_03_0043 -
12741661-12741816,12741980-12742153,12742870-12742932,
12744107-12744214,12744303-12744418,12745188-12745314,
12746423-12746592,12747409-12747487,12747558-12747669,
12748064-12748154,12748425-12748534,12748536-12748666,
12749557-12749817
Length = 565
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 14 DFR-EVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPV 166
DFR + + P A + D R+TA QAL+HE++ + +D P+
Sbjct: 325 DFRRKPWPNITPCAKDFVQKLLVKDPRARLTAAQALSHEWVREGGQASDIPL 376
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 191 RSSGRRAQKPARRSGPRTEPSTRARALV 108
RSS RA+KP RR PR + R R+ V
Sbjct: 402 RSSSVRAEKPLRRPSPRRDAVHRHRSPV 429
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 83 DADKRITAEQALAHEYLAQYADPTDEPVSAPYDQSFEDMELPVDKWKEL 229
DAD R + EQ L+H ++ +Y + T + V+ Y +S D P ++ K++
Sbjct: 373 DADARPSCEQLLSHPFIKRYENTTVDLVA--YVKSIVD---PTERLKQI 416
>04_03_0211 - 12694217-12694318,12695119-12695256,12695470-12695628
Length = 132
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 200 PCLRSSGRRAQKPARRSGPRTEPSTR 123
P LRS + KPAR +GPR+ + R
Sbjct: 25 PALRSLNQDPPKPARHTGPRSHIAVR 50
>03_01_0061 +
490037-490045,490121-490302,490551-490671,491933-492106,
492246-492409,492506-492593,492687-492740,492837-492917,
493075-493083
Length = 293
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 41 NPLAINXXXXXXXXDADKRITAEQALAHEY 130
+P ++ + +KRITA QAL HEY
Sbjct: 256 DPAGLDLLSKMLRYEPNKRITARQALEHEY 285
>02_03_0347 - 17999780-18000592,18000656-18003019
Length = 1058
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Frame = +1
Query: 10 TRLPRGVPRREPTRHQPA--GTDARTGCR*THNGRTSARARVLGSVRGPDRRAGFCALRP 183
TR +P P + G DAR NGR +A A S G ++G P
Sbjct: 153 TRRSSAIPSSTPPTKEDVRGGPDARLNIERRRNGRRAAHATKGASSSGAPLQSGHGGQPP 212
Query: 184 ELRRHGAACR 213
GA CR
Sbjct: 213 MSPVGGAGCR 222
>05_02_0114 +
6753868-6754126,6754225-6754592,6754704-6754992,
6755838-6755909,6757440-6757666
Length = 404
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Frame = -1
Query: 449 LTNFISRKXGKXPNXGFI--NYIKTLA--INTPATA*RHECNRAIIIXN-----TVANYX 297
L + R GK P + ++ K +A + PA RH + I + TVA Y
Sbjct: 270 LREAVERMRGKYPTTKLVYADFYKPVASLVRRPAKFDRHRSAIVVAIAHKCECATVAMYT 329
Query: 296 GFTSTTVFMCCGCG 255
FT + CCG G
Sbjct: 330 RFTQQPLKACCGGG 343
>03_06_0148 + 31982976-31984097
Length = 373
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 55 QPAGTDARTGCR*THNGRTSARARVLGSVRGPDR 156
+PAG D G R R + + R+L VRG +R
Sbjct: 313 EPAGGDHEAGDRPERGSRENVQQRLLRGVRGEER 346
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,942,878
Number of Sequences: 37544
Number of extensions: 224008
Number of successful extensions: 707
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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