Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060452.seq
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5853| Best HMM Match : Pkinase (HMM E-Value=3.6e-05) 92 3e-19
SB_45756| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15) 55 4e-08
SB_51866| Best HMM Match : Pkinase (HMM E-Value=0) 50 2e-06
SB_20713| Best HMM Match : Pkinase (HMM E-Value=0) 48 8e-06
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_27803| Best HMM Match : Pkinase (HMM E-Value=2.1e-08) 28 5.3
SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_5853| Best HMM Match : Pkinase (HMM E-Value=3.6e-05)
Length = 229
Score = 92.3 bits (219), Expect = 3e-19
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVSAPYDQSFED 196
F E F GANPLA++ D D RITA +AL+H YLA YADP DEP + +D SF++
Sbjct: 131 FDEYFVGANPLAVDLLEKMLNLDTDHRITAVEALSHPYLASYADPNDEPTCSTFDDSFDE 190
Query: 197 MELPVDKWKELVWKEVVEFSRIRS 268
EL ++ W+ LV++E+++F + RS
Sbjct: 191 KELSIEGWRALVYQEILDFQQKRS 214
>SB_45756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVS-APYDQSFE 193
F ++F A+ A++ + +KRIT E+ALAH YL QY DP DEPV+ P+ E
Sbjct: 16 FIKLFSNADAKALDLIENLLAFNPNKRITVEEALAHPYLEQYYDPADEPVAETPFKFQME 75
Query: 194 DMELPVDKWK 223
+LP +K K
Sbjct: 76 LDDLPKEKLK 85
>SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15)
Length = 280
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVS-APYDQSFE 193
F ++F A+ A++ + +KRIT E+ALAH YL QY DP DEPV+ P+ E
Sbjct: 118 FIKLFSNADAKALDLIENLLAFNPNKRITVEEALAHPYLEQYYDPADEPVAETPFKFQME 177
Query: 194 DMELPVDKWK 223
+LP +K K
Sbjct: 178 LDDLPKEKLK 187
>SB_51866| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 948
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 17 FREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVS-APYDQSFE 193
F + F ++P AIN D +RIT E AL H +L +Y DEP +P D F+
Sbjct: 245 FEKFFPKSHPEAINLLSQMLQLDPKERITVENALQHPFLKEYHSEEDEPTCYSPLDFKFD 304
Query: 194 DMELPVDKWKELVWKEVVEFSR 259
+ + + KE + E+ +F +
Sbjct: 305 TVLMTKEALKEAIVNEIKDFQK 326
>SB_20713| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 492
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 GTRRDFREVFRGANPLAINXXXXXXXXDADKRITAEQALAHEYLAQYADPTDEPVS-APY 178
G + F+ +P A++ + RITAE AL H YL Y+ P DEP+S AP
Sbjct: 269 GPKEPLYSKFQDLDPKALDLLKQMLRFSPESRITAEDALTHPYLGLYSFPEDEPISLAPL 328
Query: 179 DQSFEDMELPVDKWKELVWKEVVEF 253
E + D +EL+ E++ +
Sbjct: 329 HIEDEVDDFSEDILRELMLDEIIRW 353
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 83 DADKRITAEQALAHEYLAQYADPTDEPVSAPYDQSFEDMELP 208
D KRITAE AL +Y + P D + + E ++P
Sbjct: 727 DPKKRITAETALKEDYFLEAPKPIDPSLFPTWPAKSEMQKMP 768
>SB_27803| Best HMM Match : Pkinase (HMM E-Value=2.1e-08)
Length = 318
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 38 ANPLAINXXXXXXXXDADKRITAEQALAHEY 130
A+ + I D D+RI+A+QAL HEY
Sbjct: 159 ASNMCIELIELLCTYDPDERISAKQALRHEY 189
>SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 83 DADKRITAEQALAHEYLAQYADPTDEPVSAPYDQSFEDMEL 205
D +KRIT E+AL+H+++ + D S + S ++ME+
Sbjct: 323 DQEKRITPEEALSHQFVT-LSHLVDFAHSNVFKSSVKNMEI 362
>SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 92 KRITAEQALAHEYLAQYADPTDEPVSAPYDQSFEDMELPVDKWKE 226
++ + L + L YAD +PV A + SF + +LP WK+
Sbjct: 439 RKASGPDGLPNWVLQNYADFLADPVCAILNSSFAEQKLP-PSWKD 482
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,026,108
Number of Sequences: 59808
Number of extensions: 257105
Number of successful extensions: 677
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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