Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060452.seq
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    24   4.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   5.9  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   5.9  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   5.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.8  

>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 103 RYAFIGIQFEHQFQQVDGEWVRAAEHLAE 17
           R AFIG+   +       +WVRA EH+ E
Sbjct: 227 RGAFIGVHLRNGI-----DWVRACEHVKE 250


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -1

Query: 170 QKPARRSGPRTEPSTRARALVLPLCVYR-HPVR 75
           +KP RR+G + +P    RAL    C+ R +P+R
Sbjct: 74  KKPTRRAGVKPQPDRPMRAL---FCLTRTNPLR 103


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 97  HNGRTSARARVLGSVRGPDRRAGFCALRP 183
           + G+ SA  R+L SVR P      CA +P
Sbjct: 151 YEGKWSAVKRMLLSVRLPPEDGAGCATQP 179


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 97  HNGRTSARARVLGSVRGPDRRAGFCALRP 183
           + G+ SA  R+L SVR P      CA +P
Sbjct: 151 YEGKWSAVKRMLLSVRLPPEDGAECATQP 179


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 136  SVRGPDRRAGFCALRPELRRHGAACRQVERAGVE 237
            S R  +RRA   A    LR+     +Q ER GVE
Sbjct: 1080 SPRTSERRANIRARMARLRQRHRQHQQDERRGVE 1113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,164
Number of Sequences: 2352
Number of extensions: 8174
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)