Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060451.seq
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0138 + 17093196-17093325,17095704-17095804,17096224-170962... 37 0.017
07_01_0479 + 3606663-3607448 36 0.023
07_03_1067 + 23728642-23728690,23728832-23729010 36 0.030
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132... 36 0.030
01_02_0007 + 10132380-10133201 35 0.069
04_03_0689 + 18746735-18748296,18748401-18748485 34 0.12
03_06_0471 + 34169562-34169892,34170121-34170347 34 0.12
05_05_0173 + 22956927-22958615 33 0.16
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 33 0.21
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 33 0.28
08_01_0178 - 1509100-1511214 32 0.37
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 32 0.49
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 32 0.49
05_01_0142 - 940421-940701,941262-941574 32 0.49
11_06_0610 - 25449085-25453284 31 0.64
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 31 0.64
05_04_0035 + 17378541-17381276 31 0.64
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 31 0.85
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 31 0.85
12_02_0297 + 17029850-17030047,17030814-17030973,17031666-170317... 31 1.1
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 31 1.1
04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600 31 1.1
12_02_1174 - 26696869-26698191 30 1.5
12_02_0046 + 12830974-12832386 30 1.5
09_04_0506 - 18188785-18190599 30 1.5
07_03_1160 - 24430240-24431268 30 1.5
05_02_0124 + 6849034-6851502 30 1.5
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803... 30 1.5
02_05_0700 + 31018480-31019832 30 1.5
08_02_0163 + 13470178-13470335,13470635-13470656,13470885-134710... 30 2.0
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 30 2.0
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 29 2.6
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 2.6
12_02_0702 - 22278513-22278751,22279054-22279889,22279932-222799... 29 3.4
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474... 29 3.4
09_04_0192 + 15478270-15480257,15480358-15480640,15480727-15481116 29 3.4
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 29 3.4
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 3.4
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 29 3.4
11_01_0566 + 4466318-4466695,4466736-4466909,4466941-4467038,446... 29 4.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 4.5
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 29 4.5
06_03_1089 - 27521291-27522124 29 4.5
02_05_0256 + 27201483-27202499,27203297-27203375,27204617-272049... 29 4.5
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 4.5
07_03_1176 + 24567720-24570932 28 6.0
06_03_0112 + 16781770-16782020,16782032-16782764 28 6.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 6.0
03_05_1125 + 30576951-30577010,30577163-30577285,30577393-305775... 28 6.0
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 28 6.0
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 7.9
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 28 7.9
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 28 7.9
06_02_0120 + 12055076-12055175,12055322-12055725 28 7.9
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 28 7.9
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 28 7.9
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 28 7.9
01_03_0145 - 13116302-13116958,13117365-13117430,13117786-131180... 28 7.9
01_01_0387 + 2999222-2999495,2999834-2999934 28 7.9
>06_03_0138 +
17093196-17093325,17095704-17095804,17096224-17096292,
17096403-17097650,17097763-17097871,17099459-17099655,
17099732-17099842,17099927-17100079
Length = 705
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 304 AQPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLQQ 477
+ P+P +G P Y PGF Y PSG+P +QQP P + +PQ LQQ
Sbjct: 198 SSPMPSSANGAGLTMPPMYWPGF---YTPPSGFPH--LQQPPFLRPPHGLTIPQALQQ 250
>07_01_0479 + 3606663-3607448
Length = 261
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +1
Query: 337 QPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQ 465
+PG G PG PG P P P PGPQ PG N PQ
Sbjct: 221 RPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPG--QNPPQ 261
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGY-QPGFAPGYPQPSGYPVPVMQQPGPQAP 441
Q PGM G PG +PG P F PG P P P QQPG P
Sbjct: 219 QVRPGMPGGPPPGMRPGMPPPPFRPGMPPPP----PGPQQPGQNPP 260
>07_03_1067 + 23728642-23728690,23728832-23729010
Length = 75
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQP-GYQP--GFAP-GYPQPSGYPVPVMQQPGPQ 435
Q PG PG+ P GY P G+ P GYP GYP P Q P Q
Sbjct: 16 QGYPGKDGYPPPGYPPAGYPPAQGYPPAGYPPQQGYPPPYAQPPPQQ 62
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +1
Query: 331 GFQP-GFQP--GYQP-GFAP--GYPQPSGYPVPVMQQ--PGPQAPGGW 450
G+ P G+ P GY P G+ P GYP P P P QQ GP GW
Sbjct: 28 GYPPAGYPPAQGYPPAGYPPQQGYPPPYAQPPPQQQQHSSGPSFMEGW 75
>03_01_0164 -
1326002-1326409,1326410-1326428,1326523-1326647,
1327482-1327530,1328834-1328855,1328969-1329071
Length = 241
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQP--GYQPGFAP--GYPQPSGYPVP-VMQQPGPQAPGGWMNMPQG 468
QP G +G P P GY P P GYPQ YP P PG P G PQG
Sbjct: 179 QPAYGQPYGGYPPAPPAQGYPPAAYPPAGYPQGGAYPPPGSYPPPGSYPPQGSYPPPQG 237
>01_02_0007 + 10132380-10133201
Length = 273
Score = 34.7 bits (76), Expect = 0.069
Identities = 21/44 (47%), Positives = 23/44 (52%)
Frame = +1
Query: 310 PLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 441
PLPG Q QPG QP P P P P+ P+P QP P AP
Sbjct: 98 PLPGPQPLPQPGPQPNPNPQPLP-QPNPNPQPLP---QPDPNAP 137
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/44 (50%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQ-QPGPQ 435
QPLP Q QP PG QP PG PQP+ P P+ Q P PQ
Sbjct: 85 QPLPQPQPQPQPLPLPGPQPLPQPG-PQPNPNPQPLPQPNPNPQ 127
>04_03_0689 + 18746735-18748296,18748401-18748485
Length = 548
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 379 GYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLQQLPSRFGIPF 504
G P P+ P P + P PQ GG P G + PS G PF
Sbjct: 5 GNPNPNSTPTPQPRPPQPQQQGGSPATPLGHLRPPSLAGSPF 46
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +1
Query: 343 GFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLQQLPSRFGIP 501
GF Y G+ YP GYP Q P PGG+ + P G Q P G P
Sbjct: 16 GFHGAYPSGYPGAYPLMQGYPNSPGQYP---TPGGYPSAPPG--QYPPAGGYP 63
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = +1
Query: 316 PGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGW 450
PG Q + P P Q G+ PG PSGYP QQPG P G+
Sbjct: 63 PGAQ--YPPSGYPPSQGGYPPGAYPPSGYP----QQPG-YPPAGY 100
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +1
Query: 328 HGFQPGFQPGYQP---GF--APG-YPQPSGYP-VPVMQQPGPQAPGGWMNMPQGLQQLPS 486
HG P PG P G+ +PG YP P GYP P Q P G P G PS
Sbjct: 18 HGAYPSGYPGAYPLMQGYPNSPGQYPTPGGYPSAPPGQYPPAGGYPGAQYPPSGYP--PS 75
Query: 487 RFGIP 501
+ G P
Sbjct: 76 QGGYP 80
>05_05_0173 + 22956927-22958615
Length = 562
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 152 PTPYSPNFPASH-GYVPPPEGEKPNESYP-MHPQSGFLAHHPLLCHTPAYILG 304
P PY P+ P +H YVPPP P E+ P + F HP L P+ +LG
Sbjct: 83 PEPYDPSAPEAHPPYVPPP--VPPPEAIPELADDLEFGFSHPPLLLRPSELLG 133
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +1
Query: 316 PGMQHGFQPGFQPGYQPGFAPGYP----QPSGYPVPVMQQPGPQA 438
PG + + P + P Y P + P YP PS +P + P A
Sbjct: 337 PGPGYAYPPPYPPSYPPPYQPSYPPYPSHPSHHPSQIFSDENPNA 381
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 316 PGMQHGFQPGFQPGYQPGFAPGYPQP--SGYPVPVMQQPGPQAPGGWMNMPQG 468
PG Q G PG+ G P + G P P +G PV PG Q GG + QG
Sbjct: 326 PGYQGG-GPGYHGGNPPPYQAGNPPPYQAGNPVFAGGAPGYQGQGGNPSYQQG 377
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 313 LPGMQHGFQPGFQPGYQPGFAPGYPQPSGYP--VPVMQQPGPQAPGG 447
+PG Q G PG+Q G Q P P PS Y P Q GP GG
Sbjct: 293 VPGYQ-GRAPGYQGGNQEYRGPPPPPPSAYQGNNPGYQGGGPGYHGG 338
>08_01_0178 - 1509100-1511214
Length = 704
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 252 ASWPTTHSYATPRPTSWGTTPSGHAAWVPARISTWLSTRIC 374
A W S P+P TTP G P R+ W S C
Sbjct: 47 ARWTNAPSNPPPQPAGGSTTPFGQTTGFPMRVRPWSSCDKC 87
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 316 PGMQHGFQPGFQPGYQPGFAPGYPQPSGYP 405
PG Q G P +Q G PG+APGY G P
Sbjct: 342 PGYQGGNPPPYQGG-NPGYAPGYHGQGGNP 370
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 31.9 bits (69), Expect = 0.49
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 307 QPLPGM---QHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQ-PGPQAPGGWMNMPQGLQ 474
QP P Q GF GFQ PG PG + +P++QQ PQ P G G+Q
Sbjct: 445 QPPPAFINTQPGF--GFQQPLMPGMRPGAGPMPNFIMPMVQQGQQPQRPAGRRAGAGGMQ 502
Query: 475 Q 477
Q
Sbjct: 503 Q 503
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 304 AQPLPGMQHGFQPGFQPGYQPGFAP--GYPQPSGYPVP-VMQQPGPQAPGGW 450
A P P + PG P + P GYPQP GYP P Q G P G+
Sbjct: 46 AYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGGYPQHGGYPPAGY 97
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +1
Query: 328 HGFQP--GFQP-GYQPGFAPG-YPQPSG-YPVPVMQQPGPQAPGGW 450
HG+ P G+ P GY P PG YP P G YP P P P PG +
Sbjct: 27 HGYPPHQGYPPQGYPP--PPGAYPPPPGAYPPPPGAYPPP--PGAY 68
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 131 ELTMSHKPTPYSPNFPASHGYVPPPEGEKPNE 226
E + +++ P +P+ P SHG PPPE E P E
Sbjct: 440 EKSPAYEEPPAAPSTPTSHGP-PPPEEESPEE 470
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 164 SPNFPASHGYVP-PPEGEKPNESYPMHPQS 250
SP PA G+ P PPE P+E P P+S
Sbjct: 627 SPPPPAPEGHTPSPPESTPPSEKSPPTPES 656
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 152 PTPYSPNFPASHGYVPPPEGEKP 220
PT YSP PA+ PPPEG+ P
Sbjct: 536 PTEYSP--PATPESSPPPEGKSP 556
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +2
Query: 152 PTPYSPNFPASHG---YVPPPEGEKPNESYPMHPQSGFLAHHPLLCH-TPAYILGHNP 313
P Y+P P ++G Y PPP +P Y HP F P H P Y G+ P
Sbjct: 121 PEAYAPPPPPAYGHQAYPPPPPNREPGHGY--HPAPAFYPPQPPPSHDEPGY--GYRP 174
>05_04_0035 + 17378541-17381276
Length = 911
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 361 QPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLQQLPSRFGIP 501
QPG+ +P +G+ P +QQP P + Q ++FG P
Sbjct: 746 QPGYGTSHPWHTGFNAPQVQQPSYGGPQSSQHAVGSTQPPQAQFGAP 792
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 161 YSPN-FPASHGYVPPPEGEKPNESYPMHP 244
Y P +P+SHG PPP+G P P P
Sbjct: 60 YPPQGYPSSHGVYPPPQGPYPPPHQPPPP 88
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +1
Query: 328 HGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGG 447
HG P QPGY GY QP YP Q PQ P G
Sbjct: 394 HGGAPMQQPGY------GYMQPGAYPGAPPQYGAPQQPYG 427
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Frame = +1
Query: 310 PLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYP---VPVMQQPGP-QAPGGWMNMPQGLQQ 477
P P +G QP Q GY G PQ P P Q P P APGG+ G Q
Sbjct: 610 PPPQTGYGTQPQPQGGYSQGSYGAPPQGQKAPPNTSPYGQAPPPGSAPGGYGQ--YGYSQ 667
Query: 478 LPSRFGIP 501
+G P
Sbjct: 668 NQQGYGAP 675
>12_02_0297 +
17029850-17030047,17030814-17030973,17031666-17031782,
17032145-17032575
Length = 301
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 215 KPNESYPMHPQSGFLAHHPLLCHTPAYILGHNPFRACSMGSS 340
KP +S P +PQ+ H CH PA++ FRA + S+
Sbjct: 42 KPTKSLPKNPQTFQRPIHTTQCHVPAFV--RTGFRAMRVSSA 81
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +1
Query: 325 QHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 441
Q GF GFQ PG PG Y VPV+QQ G Q P
Sbjct: 466 QPGF--GFQQQLVPGMRPGGAHMPNYFVPVVQQ-GQQGP 501
>04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600
Length = 585
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +1
Query: 319 GMQHGFQPGFQPGYQPGFAP-GYPQPSGYPVPVMQQPGPQ----APGGWMNMPQG 468
G GF PGF G Q G AP G + G P +PGP+ GGW N G
Sbjct: 19 GFARGFHPGFVVGNQHGGAPGGRGRGRGRGRPT-GRPGPRHEFSHAGGWNNFGGG 72
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 441
QP P +Q P P P P QP P P + P P P
Sbjct: 180 QPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPP 224
>12_02_0046 + 12830974-12832386
Length = 470
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 155 TPYSPNFPASHGYVPPPEGEKPNESYPMHP 244
TP SP+ P + PPP + P +SY + P
Sbjct: 342 TPPSPHAPRHDPFEPPPSPDPPIQSYAIDP 371
>09_04_0506 - 18188785-18190599
Length = 604
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 343 GF-QPGYQPGFAPGYPQPSGYPVPVMQQPGP-QAPGGWMNMPQGLQQLPSRFGIP 501
GF Q + P P PQ P P+ QQP P QAP Q QQL + +P
Sbjct: 43 GFLQSSHPPPQPPPPPQQQQQPPPISQQPPPLQAPPPPPQQQQQQQQLQAPPSLP 97
>07_03_1160 - 24430240-24431268
Length = 342
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 441
QP PG+ P P +P P P+P G P+P + QP P P
Sbjct: 67 QPTPGVPPLPNPDVPPMNKPDVPP-MPKPDGPPIPPV-QPCPDQP 109
>05_02_0124 + 6849034-6851502
Length = 822
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 197 PPPEGEKPNESYPMHPQSGFLAHHPLL 277
PPP PN ++P +P+S LA HP L
Sbjct: 19 PPPPPSPPNSTFPRYPKS--LAAHPAL 43
>02_05_0970 -
33179180-33179210,33179297-33179441,33180307-33180362,
33180650-33180691,33180814-33180866,33181059-33181490,
33181630-33181707,33181785-33181870,33183588-33183689,
33183754-33183960,33184976-33185336,33185463-33185626,
33185709-33185817,33186468-33186485
Length = 627
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 352 PGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWM--NMPQGLQQLP 483
P F+ SG P +QQPG PG + N+P G+ Q+P
Sbjct: 54 PNMPGSFSQRNAAMSGLPSSGVQQPGGSMPGRFASNNLPVGMSQIP 99
>02_05_0700 + 31018480-31019832
Length = 450
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGYQ-PGFA-PGYP----QPSGYPVPVMQQPGPQAPG 444
QPLPG QP PG PG + PG P +P G P+P PG PG
Sbjct: 54 QPLPGQSLPGQP--LPGQPLPGQSLPGQPLVGEKPPGQPLPGQPLPGQSLPG 103
>08_02_0163 +
13470178-13470335,13470635-13470656,13470885-13471055,
13471157-13471363,13471458-13471700
Length = 266
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQ-PGPQAPGGWMNMPQGLQQ 477
QP+PG GFQ PG P + +P++QQ PQ P G G+QQ
Sbjct: 58 QPMPGF------GFQQHLIPGMRPSVGPIPNFVMPMVQQGQQPQRPAGRRAGTGGIQQ 109
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 107 IYEKGYETELTMSHKPTPYSPNFPASHGYVPPPEGEKPNESYPMHPQSGFLAHHPLLCHT 286
++++ E P Y PN YVPPP G P P A P
Sbjct: 381 VHQQPEEVAAPYGPPPQSYPPNVRLPSPYVPPPSGPAPPFYGPNPGMYEPPAVRPNSGPP 440
Query: 287 PAYILGHNP 313
P+Y G+ P
Sbjct: 441 PSYNTGYKP 449
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 331 GFQPGFQPGYQPGFAPGYPQPSGY 402
G P + GY+P G+P+P GY
Sbjct: 438 GPPPSYNTGYKPQGGGGFPEPYGY 461
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +2
Query: 146 HKPTPYSPNFPASHGY---VPPPEGEKPNESYPMHPQSGFLAHHPLLCHTP 289
H P PY+ P Y +PPP+ ++ P H Q A H + +P
Sbjct: 28 HHPPPYAAPLPQYAPYARGMPPPQAQQLYSHLPPHQQPPHFAAHAMPSPSP 78
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/65 (43%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Frame = +1
Query: 304 AQPLPGMQHGFQ----PGFQPGYQPGFAPGYPQPS------GYPVPVMQQPGPQAP-GGW 450
A PL G HG Q PG PG QP PG P PS MQQ PQ P
Sbjct: 488 AMPLDGSDHGEQRPSIPGLPPG-QPPLPPG-PHPSLLAGGQQQQYQQMQQQHPQFPRPPP 545
Query: 451 MNMPQ 465
NMPQ
Sbjct: 546 PNMPQ 550
>12_02_0702 -
22278513-22278751,22279054-22279889,22279932-22279975,
22280350-22280463
Length = 410
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 222 MKVTPCILKAASWPTTHSYATPRPTSWGT-TPSGHAAWVPARIS 350
++ T ILKA+S PT + P PT T P+ + WV A S
Sbjct: 133 IRTTTAILKASSSPTPMAPPPPTPTKCLTKCPNNNFTWVMANSS 176
>09_04_0424 +
17444261-17444665,17445974-17446367,17447367-17447425,
17447507-17447637,17447737-17447833,17447936-17448100
Length = 416
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +1
Query: 334 FQPGFQPGYQPGFAPGYPQPSGYPVPV---MQQPGPQAPGG 447
F P F P + G P PQP P PV M P P A GG
Sbjct: 63 FAPHFVPFHAVG-PPPPPQPRAAPPPVAVAMGSPAPHAQGG 102
>09_04_0192 + 15478270-15480257,15480358-15480640,15480727-15481116
Length = 886
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = -2
Query: 382 IQEQILVDSQVEILAGTHAACPEG-----VVPQDVGRGVA*EWVVGQEAALRMHGVTFI 221
+Q + L+D +LA A G V+PQ V +GVA E +V AA R + F+
Sbjct: 725 LQAKELLDHLATVLASEPVAVRSGYKIVEVIPQGVSKGVAAECIVSAMAARRGGALGFV 783
>07_03_1546 + 27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +1
Query: 334 FQPGFQPGY--QPGFAPGYP----QPSGYPVPVMQQPGPQA 438
F P PG+ +PG +P P Q G P PV+ P P A
Sbjct: 951 FMPSNNPGFVQRPGLSPVQPSSPTQAQGQPQPVVAPPAPPA 991
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Frame = +1
Query: 343 GFQPGYQPG-FAP---GYPQP-SGYPVPV----MQQPGPQAPGGWMNMPQGLQQLPSRFG 495
G P PG +AP G P P + YP P M P P APG P G+Q P
Sbjct: 421 GAPPPPPPGSYAPVPWGQPPPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPPPAP 480
Query: 496 IP 501
IP
Sbjct: 481 IP 482
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +1
Query: 307 QPLPGMQHGFQ--PGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLQQL 480
QP+P +G P P Y P P Y S YP QP P P + Q L
Sbjct: 510 QPVPAPVYGTSGAPNAPPMYPP---PPYGYASYYPSVTPVQPPPPPPPAGADPSQSLANA 566
Query: 481 PSRFGI 498
P + +
Sbjct: 567 PGQLTV 572
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 313 LPGMQHGFQPGFQPGYQPGFAP--GYPQPSGYP-VPVMQQPGPQAPGGWMNMPQGLQQLP 483
+PGMQ PG QP PG P Y QP P + P P+ G M+ + +QQ
Sbjct: 578 MPGMQF---PGMQPSPMPGAQPVMMYAQPMMMPGMQFAAMPQPRMYGPQMSQYRLVQQQA 634
Query: 484 SRF 492
+++
Sbjct: 635 AQY 637
>11_01_0566 +
4466318-4466695,4466736-4466909,4466941-4467038,
4467211-4467346
Length = 261
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 225 KVTPCILKAASWPTTHSYATPRPTSWGTTPSGHAAWVPARISTWLS 362
K T ILKAAS PT + P PT T S A ++T ++
Sbjct: 51 KATSTILKAASSPTPMAPPPPTPTKCSTICSSSDAKADITVATMVT 96
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPG 444
QP P +G P QP Y P P G P P + P P PG
Sbjct: 21 QPPPMNPYGPPPPQQPAYGH-----MPPPQGAPPPFLAPPPPPPPG 61
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +2
Query: 146 HKPTPY--SPNFPASHG--YVPPPEGEKPNESYPMHP 244
H P P+ P+ P HG Y PP PN +Y + P
Sbjct: 1174 HPPGPHFSGPSVPPHHGNNYHQPPSVPPPNNAYHLQP 1210
>06_03_1089 - 27521291-27522124
Length = 277
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 164 SPNFPA-SHGYVPPPEGEKPNESYPMHPQSGFLAHHPLLCH 283
SP PA S PPP E+ + PM P+ F HP H
Sbjct: 171 SPASPAASPTPPPPPPTERSADVRPMPPEGHFFIPHPHFMH 211
>02_05_0256 +
27201483-27202499,27203297-27203375,27204617-27204946,
27205029-27205198
Length = 531
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 219 QMKVTPCILKAASWPTTHSYATPRPTSWGTTPSGHAAWVPARISTWLS 362
++ TPC + + + TT S ATPR T PS W A + W+S
Sbjct: 223 EVAATPCWMPSPARFTTPS-ATPRHHIITTKPSSLRIWWVADLMRWMS 269
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 334 FQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQ 435
F G +PG +P P P+P P P +PGP+
Sbjct: 153 FHHGPKPGPKPKPKPSPPKPKPGPKPKPPKPGPK 186
>07_03_1176 + 24567720-24570932
Length = 1070
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 683 LKXSRSKFFWCQQSLSLNPHNKTFXTQHCSINCVICCLS-RPXQKLLIIQL 534
L+ R++ F+ + PH+ T H ++ C + LS RP K ++ +L
Sbjct: 1009 LRQGRAREFFIDGLWDVGPHDDLVETLHLAVMCTVDSLSVRPTMKQVVQRL 1059
>06_03_0112 + 16781770-16782020,16782032-16782764
Length = 327
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 131 ELTMSHKPTPYSPNFP--ASHGYVPPPEGEKPNESYPMHPQSGFLAHHP 271
+L++ P + P F AS PPP G PN + HPQ + P
Sbjct: 191 QLSIPRAPQVHQPIFDQGASTSAAPPPHGYDPNTFF--HPQYAYFRIQP 237
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 PLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMP--QGLQQLP 483
P P G P P G G P P G P P M P PGG P +GL P
Sbjct: 1174 PPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMP---PGVPGGPPPPPGGRGLPAPP 1230
Query: 484 SRFGIPFH 507
G+ H
Sbjct: 1231 GGRGVVGH 1238
>03_05_1125 +
30576951-30577010,30577163-30577285,30577393-30577552,
30577635-30577702,30577928-30578473,30578725-30579312,
30579392-30579604,30580227-30580388
Length = 639
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 358 YQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLQQLPS 486
Y G+AP P PSG PVP + G P Q P+
Sbjct: 145 YGYGYAPYGPYPSGSPVPTVGHDGQSYGAQHYQYPGQYYQQPA 187
>03_02_0786 -
11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +1
Query: 337 QPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGL 471
+PGF P P P P PVPVM G P W +PQ L
Sbjct: 23 RPGFPVAPPPPMGPPPPPPMP-PVPVMYLRGVPPPPPW--LPQHL 64
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 152 PTPYSPNFPASHGYVPPPEGEKPNESYPMH 241
PTP +PN S PPP P + PMH
Sbjct: 43 PTPLTPNPNPSPTLPPPPMSTPPVVAPPMH 72
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPV--PVMQQPGPQAPGGWMNMPQGLQQ 477
QP G Q G+ P P +P PG P G P Q P P + G P Q
Sbjct: 477 QPPAGPQQGYPPQQDPYARPYGGPGQWAPRGAPAGDGTYQAPPPTSYGPPSQQPPAYGQ 535
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = +1
Query: 307 QPLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLQQLPS 486
QP P + + P QP QP P PQ YP QP P P G P Q
Sbjct: 251 QPQP-QRETYPP--QPQVQP--YPPKPQGQPYPPQPQGQPYPPQPYGQTYPPPPKGQPTY 305
Query: 487 RFGIPFHVXQLI 522
G P + QLI
Sbjct: 306 PPGYPAFIIQLI 317
>06_02_0120 + 12055076-12055175,12055322-12055725
Length = 167
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +1
Query: 319 GMQHG---FQPGFQPGY-QPGFAPGYPQPSGY 402
G +HG QP + GY QPG+ GY QP GY
Sbjct: 58 GYEHGGGYSQPRYGGGYGQPGYGGGYGQP-GY 88
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = +1
Query: 304 AQPLPGMQHGFQPGF-----QPGYQPGFAPGY 384
+QP G +G QPG+ QPGY G+ PGY
Sbjct: 66 SQPRYGGGYG-QPGYGGGYGQPGYGSGYGPGY 96
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 340 PGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGLQQLP 483
PG P G P P P P P Q P P P M MP + P
Sbjct: 254 PGTLPNGSGG--PPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPP 299
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 346 FQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAP 441
F P P PG+P SG P P QP P
Sbjct: 113 FPPSAHPQHYPGWPGVSGRPHPCGLQPAMPTP 144
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 GYETELTMSHKPTPYSPNFPASHGY-VPPPEGEKPNESYPMHPQSGFLAHHPLLCHT 286
G+ E + P P P P+S Y PP + +P+H S P HT
Sbjct: 176 GWHPEADVPPPPPPLEPPVPSSSDYHAKPPLQAVKSSLFPIHSGSPAATARPPSSHT 232
>01_03_0145 -
13116302-13116958,13117365-13117430,13117786-13118065,
13118283-13119028
Length = 582
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 98 RQLIYEKGYETELTMSHKPTPYSPNFPASHGYVPP 202
R+LI ++ + S +PYSPNFP+S + P
Sbjct: 280 RELIIFGNNQSPSSSSPALSPYSPNFPSSPNPISP 314
>01_01_0387 + 2999222-2999495,2999834-2999934
Length = 124
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/66 (28%), Positives = 23/66 (34%)
Frame = +2
Query: 110 YEKGYETELTMSHKPTPYSPNFPASHGYVPPPEGEKPNESYPMHPQSGFLAHHPLLCHTP 289
YE+GY H + +P HG PP G P Y A H H
Sbjct: 39 YEQGYGGHGYPPHAGAAHGA-YPPQHGAYPPQHGAYPGHGYVPGAYPSNAAPHG--GHMG 95
Query: 290 AYILGH 307
+Y GH
Sbjct: 96 SYHTGH 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,754,067
Number of Sequences: 37544
Number of extensions: 398116
Number of successful extensions: 1964
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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