Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060448.seq
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 50 3e-07
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 49 7e-07
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 49 7e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 48 1e-06
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 46 5e-06
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 45 1e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 44 2e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 41 1e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 40 2e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 40 3e-04
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 40 4e-04
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 35 0.009
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 31 0.15
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 31 0.15
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 31 0.15
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 29 0.46
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 29 0.61
SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex ... 27 1.9
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 27 1.9
SPAC14C4.08 |mug5||meiotically upregulated gene Mug5|Schizosacch... 27 2.5
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 2.5
SPAC10F6.15 |||S. pombe specific UPF0300 family protein 1|Schizo... 27 3.3
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 27 3.3
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 27 3.3
SPAC26H5.09c |||GFO/IDH/MocA family oxidoreductase|Schizosacchar... 26 4.3
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 26 4.3
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 7.5
SPCC1753.02c |git3||G-protein coupled receptor Git3|Schizosaccha... 25 9.9
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 25 9.9
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 50.0 bits (114), Expect = 3e-07
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Frame = +2
Query: 254 KRNFRCEY--CEKSYPRLKSLQYHIRTHTNDRRYRCHV--CGQAFIQNASLKSHIKSH-- 415
K+ F C Y C K Y R L+ H+RTH+N+R + C C +AF + + LK H + H
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTN 79
Query: 416 -HP-ECDIEGC 442
P C +GC
Sbjct: 80 VKPFSCHYDGC 90
Score = 45.6 bits (103), Expect = 7e-06
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +3
Query: 21 CDECFMSYALKNKHLTEAHGQKRTYPCNL--CDKVYNRQKTLTEHQRRNHQKVLKHQC-- 188
CDECF + H++ H YPC C+ + ++ L H R H+K++ + C
Sbjct: 120 CDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPH 179
Query: 189 EYC--DQRFYLPSRLKEHM 239
E C + F S+L+ H+
Sbjct: 180 ESCVGHEGFEKWSQLQNHI 198
Score = 44.0 bits (99), Expect = 2e-05
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = +3
Query: 12 CPRCDECFMSYA---LKNKHLTEAHGQKRTYPCNL--CDKVYNRQKTLTEHQRRNHQKVL 176
CP +EC Y+ L +HL H +R + C+ C K + R+ L H +R H V
Sbjct: 25 CPY-EECGKKYSRPSLLEQHL-RTHSNERPFVCDYTGCSKAFYRKSHLKIH-KRCHTNVK 81
Query: 177 KHQCEY--CDQRFYLPSRLKEHMATH 248
C Y CD +FY L+ H+ H
Sbjct: 82 PFSCHYDGCDAQFYTQQHLERHIEVH 107
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +3
Query: 36 MSYALKNKHLTEAHGQKRTYPCNL--CDKVYNRQKTLTEHQRRNHQKVLKHQCEY--CDQ 203
+S +++K+L A K+ + C C K Y+R L +H R H C+Y C +
Sbjct: 7 LSIEIESKNLRSA---KKIFHCPYEECGKKYSRPSLLEQHLR-THSNERPFVCDYTGCSK 62
Query: 204 RFYLPSRLKEHMATHT 251
FY S LK H HT
Sbjct: 63 AFYRKSHLKIHKRCHT 78
Score = 35.9 bits (79), Expect = 0.005
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 263 FRCEY--CEKSYPRLKSLQYHIRTHTNDRRYRC--HVCGQAFIQNASLKSHIKSHH 418
F C Y C+ + + L+ HI H + Y C C + F ++ L+SHI + H
Sbjct: 83 FSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
Score = 34.3 bits (75), Expect = 0.016
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Frame = +2
Query: 254 KRNFRC--EYCEKSYPRLKSLQYHIRT-HTNDRRYRCHVCGQAFIQNASLKSHI------ 406
++ + C E C+KS+ R +L+ HI H + + C CG F L+ H+
Sbjct: 233 RKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCK 292
Query: 407 KSHHP---ECDIE 436
K+H P EC I+
Sbjct: 293 KAHKPYINECGIK 305
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 48.8 bits (111), Expect = 7e-07
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 224 SKGTHGYTHGKRNFRCEY--CEKSYPRLKSLQYHIRTHTNDRRYRCHVCGQAFIQNASLK 397
+K + Y G ++C++ C KS+ R + + H R+HTN + + C C +F ++ L
Sbjct: 4 AKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLN 63
Query: 398 SHIKSHH 418
H+ H
Sbjct: 64 RHVNQKH 70
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 48.8 bits (111), Expect = 7e-07
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 278 CEKSYPRLKSLQYHIRTHTNDRRYRCHVCGQAFIQNASLKSHIKSH 415
C K R +++ HI+TH +DR YRC +C F+++ LK H++ H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Score = 39.1 bits (87), Expect = 6e-04
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 233 THGYTH-GKRNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHVCGQAFIQNASLKSH 403
+H TH R +RC+ C+ + R L+ H+R H N R Y C C + F + +L H
Sbjct: 462 SHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 32.7 bits (71), Expect = 0.050
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 9 RCPRCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRN 161
RC C F+ + +HL H R Y C C K +NR L H++RN
Sbjct: 474 RCDLCKAGFVRHHDLKRHL-RIHENGRPYVCE-CLKRFNRLDALNRHKQRN 522
Score = 29.5 bits (63), Expect = 0.46
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 69 EAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYCDQRFYLPSRLKEH 236
+ H R Y C+LC + R L H R H+ + CE C +RF L H
Sbjct: 465 QTHLSDRPYRCDLCKAGFVRHHDLKRH-LRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 93 YPC--NLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYCDQRFYLPSRLKEHMATH 248
Y C N C+K R+ + H + H ++C+ C F LK H+ H
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQ-THLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 48.0 bits (109), Expect = 1e-06
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 227 KGTHGYTHGKRNFRCEY--CEKSYPRLKSLQYHIRTHTNDRRYRCHVCGQAFIQNASLKS 400
K + + G F C Y C KS+ R + L+ H RTH N + + C C +AF ++ L
Sbjct: 14 KRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNR 73
Query: 401 HIKSHH 418
H++ H
Sbjct: 74 HVQQMH 79
Score = 36.3 bits (80), Expect = 0.004
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 24 DECFMSYALKNKHLTEAHGQKRTYPCNL--CDKVYNRQKTLTEHQRRNHQKVLKHQCEYC 197
+E F LK + G R Y C C K + R++ L H+R H+ V C +C
Sbjct: 4 EESFTEKPLKKRSRAHRLGDPRFY-CTYPDCPKSFTRKEHLRRHER-THENVKAFSCSFC 61
Query: 198 DQRFYLPSRLKEHM 239
++ F L H+
Sbjct: 62 NRAFARSDVLNRHV 75
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.0 bits (104), Expect = 5e-06
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 251 GKRNFRCEYCEKSYPRLKSLQYHIRT-HTNDRRYRCHVCGQAFIQNASLKSHIKSHHPEC 427
G ++F C C K + R + L+ HIR+ HT+++ + C +CG+ F + +L+ H + H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Query: 428 DIEGCYF 448
C+F
Sbjct: 478 PRLACFF 484
Score = 35.5 bits (78), Expect = 0.007
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +3
Query: 12 CPRCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCE 191
CP C + F +H+ H ++ + C +C K ++R+ L +H+R + + C
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLACF 483
Query: 192 YCDQRFY 212
+ +Y
Sbjct: 484 FQPSGYY 490
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 44.8 bits (101), Expect = 1e-05
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 233 THGYTHGK-RNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHVCGQAFIQNASLKSHIK 409
+H TH R F+C C+KS+ R + H + HT + + C C Q F + +L H K
Sbjct: 589 SHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Query: 410 S 412
S
Sbjct: 649 S 649
Score = 43.2 bits (97), Expect = 4e-05
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 260 NFRCEY--CEKSYPRLKSLQYHIRTHTNDRRYRCHVCGQAFIQNASLKSHIKSH 415
N+ C + C K + R +L+ H+ THTN R ++C +C ++F + + H + H
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH 622
Score = 39.5 bits (88), Expect = 4e-04
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 CDECFM-SYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYC 197
C++ F +Y LK+ H+ H R + C++C K + RQ H++ H + C C
Sbjct: 577 CNKRFTRAYNLKS-HMN-THTNYRPFQCSICKKSFARQHDKRRHEQL-HTGIKAFACVTC 633
Query: 198 DQRFYLPSRLKEHMATHTGR 257
+QRF L H + G+
Sbjct: 634 NQRFARMDALNRHYKSEVGQ 653
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2
Query: 197 RPEVLFTVASKGTHGYTHGKRNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHV----- 361
+P T A K + + + CE C +++ RL+ L+ HIR+HTN++ + C
Sbjct: 48 KPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLP 107
Query: 362 --CGQAFIQNASLKSHIKSHH 418
CG+ F + L H + H
Sbjct: 108 TGCGRQFSRRDLLLRHQQKIH 128
Score = 29.9 bits (64), Expect = 0.35
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 341 RRYRCHVCGQAFIQNASLKSHIKSHHPE 424
++Y C C +AF + LK HI+SH E
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNE 95
Score = 29.5 bits (63), Expect = 0.46
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 165 QKVLKHQCEYCDQRFYLPSRLKEHMATHT 251
QKV ++ CE C + F LK H+ +HT
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHT 93
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 257 RNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHV--CGQAFIQNASLKSHIKSH 415
R ++C C K++ RL+ HIRTHT ++ + C C + F ++ L H + H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 35.9 bits (79), Expect = 0.005
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Frame = +3
Query: 87 RTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEY--CDQRFYLPSRLKEHMATHTGRG 260
R Y C LC K + R + T H R H H C + C +RF L H HT
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRH-IRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNAN 82
Query: 261 ISAVNTAKRATRG*SRCS 314
A A +R S
Sbjct: 83 SRRNAAAAAAANNSARSS 100
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 9 RCPRCDECFMSYALKNKHLTEAHGQKRTYPCNL--CDKVYNRQKTLTEHQR 155
+CP C + F + +H+ H ++ + C C K ++R LT H R
Sbjct: 27 KCPLCTKAFYRLEHQTRHI-RTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +2
Query: 341 RRYRCHVCGQAFIQNASLKSHIKSHHPE----CDIEGC 442
R Y+C +C +AF + HI++H E C GC
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGC 61
Score = 25.4 bits (53), Expect = 7.5
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 236 HGYTH-GKRNFRCEY--CEKSYPRLKSLQYHIRTHTNDRRYRCHVCGQAFIQNASLKSH 403
H TH G++ C + C K + R L H R HTN R + A N++ S+
Sbjct: 44 HIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR-NAAAAAAANNSARSSN 101
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 263 FRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHV--CGQAFIQNASLKSHIKSH 415
+RC C + + R SL+ H +HT +R + C CG+AF ++++ H + H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 34.7 bits (76), Expect = 0.012
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 344 RYRCHVCGQAFIQNASLKSHIKSHHPE----CDIEGC 442
RYRC C Q F + +SLK H SH E CD GC
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGC 503
Score = 29.5 bits (63), Expect = 0.46
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 174 LKHQCEYCDQRFYLPSRLKEHMATHTG 254
++++C C Q F PS LK H +HTG
Sbjct: 466 VRYRCTECLQGFSRPSSLKIHTYSHTG 492
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 84 KRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYCDQRFYLPSRLKEHM 239
KR +PC+ C K + R + LT H + H K C YC+ + LK H+
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCEIKCKRKDLLKRHI 78
Score = 33.5 bits (73), Expect = 0.028
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 254 KRNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHVCGQAFIQNASLKSHIKSHH 418
KR F C+ C K + R ++L H H+ C C + LK HI+ H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 39.5 bits (88), Expect = 4e-04
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 257 RNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHV--CGQAFIQNASLKSHIKSH 415
+++ C +C++ + R + HIR+HT ++ + C C + F + L H+++H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 35.1 bits (77), Expect = 0.009
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 239 GYTHGKRNFRCEYCEKSYPRLKSLQYHIRTHTN 337
G+ + +RCE C K Y L L+YH RTH++
Sbjct: 391 GFVVENKPYRCEVCSKRYKNLNGLKYH-RTHSH 422
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +3
Query: 81 QKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCE 191
+ + Y C +C K Y L H+ +H +V Q +
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQ 431
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 31.1 bits (67), Expect = 0.15
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 295 EVKVAAVSHKDAHKRPSVP-VPRVRSGLYTERESEVAHKE 411
EV + ++ D K P P VP +SGL ++ SEVA+K+
Sbjct: 629 EVSSSKMAGLDIRKEPFTPAVPSAKSGLKKDQSSEVANKD 668
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 31.1 bits (67), Expect = 0.15
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +2
Query: 305 SLQYHIRTHTNDRRYRCHV--CGQAFIQNASLKSHIKSHH 418
+L H+R+HT ++ + C V C ++F ++ +L H+++ H
Sbjct: 92 ALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 26.2 bits (55), Expect = 4.3
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 12 CPRCDECFMSYALKNKHLTEAHGQKRTYPCNL--CDKVYNRQKTLTEHQRRNHQ 167
CPR S HL G+K + C++ CD+ + R L +H R H+
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEK-PFICSVPECDRSFTRSDALAKHMRTVHE 132
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 31.1 bits (67), Expect = 0.15
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 90 TYPCNLCDKVYNRQKTLTEHQRRNHQ 167
T+ C+ CD ++ +Q LT H+R HQ
Sbjct: 138 TFRCDKCDMMFVKQSGLTNHKRTYHQ 163
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 29.5 bits (63), Expect = 0.46
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 9 RCPRCDE--CFMSYALKNKHLTEAHGQK 86
RCPRCD C + L++K LT+ G++
Sbjct: 20 RCPRCDSRFCCLECNLEHKRLTKCSGER 47
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 29.1 bits (62), Expect = 0.61
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +3
Query: 105 LCDKVYNRQKTLTEHQRRNHQKVLK-HQCEYC-DQR-FYLPSRLKEHMATHTGR 257
+C+ V++R L HQ H K +CE C DQR F L H+ GR
Sbjct: 584 ICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKHGR 637
>SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex
subunit Orp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 102 NLCDKVYNRQKTLTEHQR-RNHQKVLKHQCEYCDQ 203
NLC KV N + +T H ++ +VL+ CE+ +
Sbjct: 52 NLCTKVLNELEEITTHTTYDSNARVLRQLCEHASE 86
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Frame = +2
Query: 275 YCEKSYPRLKSLQYHIRT---HTNDRRYRCHVCGQAFIQNASLKSHIKSHHPECD 430
+CE S R L H R N RY + +I + KS ++H CD
Sbjct: 479 HCEHSAHRAPHLALHFRNTDRRMNSHRYPFLYYPEVYILHGGYKSFYENHKNRCD 533
>SPAC14C4.08 |mug5||meiotically upregulated gene
Mug5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 179
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 102 NLCDKVYNRQKTLTEHQRRNHQKVLKH 182
NLC+++YN QK L +R VL+H
Sbjct: 156 NLCERIYNIQKLL---NKREKASVLRH 179
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 278 CEKSYPRLKSLQYHIRTHTNDRRYRCHV--CGQAFIQNASLKSHIKSHH 418
C+ P + + H+R H N+ R C V C + F + H++ H
Sbjct: 1040 CDMVLPS-EEFEMHLRGHLNNIRLNCEVSNCKKCFSNYEDMFKHLQHSH 1087
>SPAC10F6.15 |||S. pombe specific UPF0300 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 432
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 132 KTLTEHQRRNHQKVLKHQCEY 194
+T H RNHQ + K+ C+Y
Sbjct: 142 QTAVSHLLRNHQALFKYLCDY 162
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 26.6 bits (56), Expect = 3.3
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Frame = +2
Query: 38 VLRSEEQTPD*GPRTEANVSLQSV-----RQSVQPSENTDRXXXXXXXXXXXXXVRVLRP 202
V++ E++ PD GPR A ++ SV ++ + P + +V
Sbjct: 160 VVKHEKRLPD-GPRVLALRAISSVDEENRKERLSPDSDPVETESVYVDNGELSNQKVETV 218
Query: 203 EVLFTVASKGTHGYTHGKRNFRCEYCEKSYPRLKSLQYHIRTHTND 340
E+ + GY+ F+ C+K P L+S++ + T +D
Sbjct: 219 EISEKEQNDDPAGYSQYLLEFKKSKCQKKVPTLESIEENEGTEPHD 264
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +1
Query: 214 YRRV*RNTWLHTREEEFPL*ILRKELPEVKVAAVSHKDAHKRPSVPVPRVRSGLY 378
+RRV WL EE +RK L ++ V+ K+P +P +Y
Sbjct: 694 FRRVSLYKWLFNNEERPVHKFIRKRLHQIPVSNKVQPRDQKQPDFKIPNTDINVY 748
>SPAC26H5.09c |||GFO/IDH/MocA family
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 369
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -2
Query: 179 LQDFLMIPPLMLGQCFLTVVHFVAQ-------IAGIRSLLSVGLSQVFVLQSVR 39
L+ IPPL + CF V+H++ Q + S +S GL ++++ R
Sbjct: 203 LESQRQIPPLEVEDCFRIVLHYLPQEGRLPLDVIVCSSSISCGLDMRYIIKGTR 256
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 114 KVYNRQKTLTEHQRRNHQKVLKHQCEYCDQRFYLPSRLKEHMATHTGR 257
K+ + QK E Q++ CE C+++FY HMA+ R
Sbjct: 51 KILSIQKQNEEVQKKAE---FYQNCEVCNKKFYSEGAYSSHMASKKHR 95
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 257 RNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHVCG 367
+ + C +C K + L L TN+ + C+VCG
Sbjct: 134 KGYVCPFCNKKFSSLDVLSLV----TNEGTFACNVCG 166
>SPCC1753.02c |git3||G-protein coupled receptor
Git3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 440 CYF*YAFINFRDLVKKVYRAVHAPTIEYWR 529
CY Y ++ RD K + + T+++WR
Sbjct: 430 CYRGYTYLKERDSSKSYWDQIKELTLKWWR 459
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 63 LTEAHGQKRTYPCNLC-DKVYNRQKTLTEH 149
L + HG + +PC +C + VY +K +H
Sbjct: 387 LWKLHGLGKEFPCEICGNYVYMGRKAFDKH 416
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,764,461
Number of Sequences: 5004
Number of extensions: 56780
Number of successful extensions: 246
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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