BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060447.seq (686 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 103 2e-22 AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 103 2e-22 AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 103 2e-22 BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p pro... 44 3e-04 AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA ... 44 3e-04 BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p pro... 34 0.16 AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-P... 34 0.16 AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p pro... 31 1.5 AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA... 31 1.5 AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p pro... 31 2.0 AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA ... 31 2.0 AY070698-1|AAL48169.1| 76|Drosophila melanogaster RH35475p pro... 30 3.4 AE014298-2437|AAF48634.1| 76|Drosophila melanogaster CG9742-PA... 30 3.4 AE014296-2059|AAF49989.1| 747|Drosophila melanogaster CG7260-PA... 29 7.9 >L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein protein. Length = 199 Score = 103 bits (247), Expect = 2e-22 Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%) Frame = +3 Query: 117 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENSEKLNLKIVKL-Q 293 MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCE K+ K K+ + Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60 Query: 294 TEKKKELWVLFFYVEKI 344 E+K+ L + E I Sbjct: 61 REEKRVLGFVLLRGENI 77 Score = 63.3 bits (147), Expect = 3e-10 Identities = 29/36 (80%), Positives = 33/36 (91%) Frame = +2 Query: 254 KFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI 361 +FRKI+SKNSK +REEKR LGFVLLRGENIVSLT+ Sbjct: 47 EFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTV 82 >AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p protein. Length = 199 Score = 103 bits (247), Expect = 2e-22 Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%) Frame = +3 Query: 117 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENSEKLNLKIVKL-Q 293 MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCE K+ K K+ + Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60 Query: 294 TEKKKELWVLFFYVEKI 344 E+K+ L + E I Sbjct: 61 REEKRVLGFVLLRGENI 77 Score = 63.3 bits (147), Expect = 3e-10 Identities = 29/36 (80%), Positives = 33/36 (91%) Frame = +2 Query: 254 KFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI 361 +FRKI+SKNSK +REEKR LGFVLLRGENIVSLT+ Sbjct: 47 EFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTV 82 >AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA protein. Length = 199 Score = 103 bits (247), Expect = 2e-22 Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%) Frame = +3 Query: 117 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENSEKLNLKIVKL-Q 293 MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCE K+ K K+ + Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60 Query: 294 TEKKKELWVLFFYVEKI 344 E+K+ L + E I Sbjct: 61 REEKRVLGFVLLRGENI 77 Score = 63.3 bits (147), Expect = 3e-10 Identities = 29/36 (80%), Positives = 33/36 (91%) Frame = +2 Query: 254 KFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI 361 +FRKI+SKNSK +REEKR LGFVLLRGENIVSLT+ Sbjct: 47 EFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTV 82 >BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p protein. Length = 95 Score = 43.6 bits (98), Expect = 3e-04 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +3 Query: 141 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDC 251 ++ +IN+ V +I D R FIGT K FD+ +N+I+ +C Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDEC 40 >AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA protein. Length = 95 Score = 43.6 bits (98), Expect = 3e-04 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +3 Query: 141 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDC 251 ++ +IN+ V +I D R FIGT K FD+ +N+I+ +C Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDEC 40 >BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p protein. Length = 103 Score = 34.3 bits (75), Expect = 0.16 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +3 Query: 153 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENS 260 ++ +V V +++ R G AFD+H+N++LGD E + Sbjct: 26 LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEET 61 >AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-PA protein. Length = 103 Score = 34.3 bits (75), Expect = 0.16 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +3 Query: 153 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENS 260 ++ +V V +++ R G AFD+H+N++LGD E + Sbjct: 26 LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEET 61 >AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p protein. Length = 91 Score = 31.1 bits (67), Expect = 1.5 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +3 Query: 96 LPNHSDKMTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENSE 263 +P S+ T+ + + I R+ +I+++ + +GT FD +N++L D E Sbjct: 4 VPPPSNISTLMPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYE 59 >AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA protein. Length = 91 Score = 31.1 bits (67), Expect = 1.5 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +3 Query: 96 LPNHSDKMTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENSE 263 +P S+ T+ + + I R+ +I+++ + +GT FD +N++L D E Sbjct: 4 VPPPSNISTLMPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYE 59 >AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p protein. Length = 119 Score = 30.7 bits (66), Expect = 2.0 Identities = 15/51 (29%), Positives = 31/51 (60%) Frame = +3 Query: 156 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENSEKLNLKIVKLQTEKKK 308 N +V + ++++ +G KAFD+H N++L EN +++ ++ + KKK Sbjct: 38 NTQVLINCRNNKKLLGRVKAFDRHCNMVL---ENVKEMWTELPRTGKGKKK 85 >AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA protein. Length = 119 Score = 30.7 bits (66), Expect = 2.0 Identities = 15/51 (29%), Positives = 31/51 (60%) Frame = +3 Query: 156 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCENSEKLNLKIVKLQTEKKK 308 N +V + ++++ +G KAFD+H N++L EN +++ ++ + KKK Sbjct: 38 NTQVLINCRNNKKLLGRVKAFDRHCNMVL---ENVKEMWTELPRTGKGKKK 85 >AY070698-1|AAL48169.1| 76|Drosophila melanogaster RH35475p protein. Length = 76 Score = 29.9 bits (64), Expect = 3.4 Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Frame = +3 Query: 138 KMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGD----CENSEKLNLKIVKLQ 293 +++++++ R+ + L R G + FD MN++L D C+++ K N+ +V ++ Sbjct: 8 EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVVIR 63 >AE014298-2437|AAF48634.1| 76|Drosophila melanogaster CG9742-PA protein. Length = 76 Score = 29.9 bits (64), Expect = 3.4 Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Frame = +3 Query: 138 KMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGD----CENSEKLNLKIVKLQ 293 +++++++ R+ + L R G + FD MN++L D C+++ K N+ +V ++ Sbjct: 8 EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVVIR 63 >AE014296-2059|AAF49989.1| 747|Drosophila melanogaster CG7260-PA protein. Length = 747 Score = 28.7 bits (61), Expect = 7.9 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +2 Query: 512 HLNNTWAPGNRGQLSAPPSNARRPHDGWPSFQE*W 616 ++N W PG G+ PPSN H P+F W Sbjct: 199 YVNGEWVPG--GKAEVPPSNPIYVHPESPNFGAHW 231 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,589,349 Number of Sequences: 53049 Number of extensions: 473158 Number of successful extensions: 1272 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1209 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1268 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 3013199100 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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