Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060446.seq
(669 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 100 2e-22
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 55 1e-08
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 46 5e-06
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.001
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 37 0.002
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.20
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.26
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.35
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 29 0.61
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 0.61
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 26 4.3
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.3
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 26 5.6
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 5.6
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 7.5
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 7.5
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 25 9.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 100 bits (239), Expect = 2e-22
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 KTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 432
KTA APIERVKLL+Q Q + + RYKGI + F R E+G++S WRGN ANV+RY
Sbjct: 42 KTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRY 101
Query: 433 FPTQALNFAFKDKYKQVF 486
FPTQALNFAFKDK+K++F
Sbjct: 102 FPTQALNFAFKDKFKKMF 119
Score = 32.7 bits (71), Expect = 0.049
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +2
Query: 575 FVYPLDFARTRLAXDV--GKGDGQREF 649
FVY LD+ARTRLA D K G+R+F
Sbjct: 149 FVYSLDYARTRLANDAKSAKKGGERQF 175
Score = 30.3 bits (65), Expect = 0.26
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 313 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 492
S + ++++ G+VD + + + GL +RG +V+ + L F D K V L
Sbjct: 166 SAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLV 225
Query: 493 G 495
G
Sbjct: 226 G 226
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 54.8 bits (126), Expect = 1e-08
Identities = 28/75 (37%), Positives = 45/75 (60%)
Frame = +1
Query: 256 KTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYF 435
+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN N +R F
Sbjct: 35 RTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAF 87
Query: 436 PTQALNFAFKDKYKQ 480
P A+ FA + KQ
Sbjct: 88 PYGAVQFATFNMLKQ 102
Score = 30.7 bits (66), Expect = 0.20
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +1
Query: 256 KTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYF 435
+T P + ++ QV + YK I A I K +G+ F+RG +N+++
Sbjct: 241 QTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNMLKII 297
Query: 436 PTQALNF 456
P ++ +
Sbjct: 298 PVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +1
Query: 256 KTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYF 435
K+ VAP++RVK+L Q H S + A R+ G+ A I GL ++G+ A + R F
Sbjct: 32 KSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYRVF 90
Query: 436 PTQALNFAFKDKYKQVFL 489
P + F ++ ++V +
Sbjct: 91 PYAGIKFVAYEQVRRVLI 108
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 262 AVAPIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 432
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 433 FPTQALNFAFKDKYKQVFLGGVDKKSSSGVTSLV 534
P +AL FA D Y +++ +K SS S++
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109
Score = 31.5 bits (68), Expect = 0.11
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 265 VAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 441
V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G A + R+
Sbjct: 122 VVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNGFEATMWRHVVW 174
Query: 442 QALNFAFKDKYK 477
A F K +
Sbjct: 175 NAGYFGVIQKIR 186
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 578 VYPLDFARTRLAXDVGKGDGQREFFRSRKL 667
+YPLD +TR+ VGK D F +K+
Sbjct: 26 LYPLDVVKTRMQLSVGKSDYNGTFDCLKKI 55
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +1
Query: 259 TAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 438
T V P+ ++ LQ Q S A Y G +D F + K +G ++G N+++ P
Sbjct: 351 TIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAP 407
Query: 439 TQALNFAFKDKYKQ 480
+ A+++ + K+
Sbjct: 408 SVAISYLVYENCKK 421
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGNFANVIRYFPT 441
+ P++ +K +Q +S+ Q K I+ + + + K G+ ++RG ++ FP
Sbjct: 246 IYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGVLVGILGMFPY 301
Query: 442 QALNFAFKDKYKQVFLG 492
A + + K+ ++G
Sbjct: 302 SATDLGTFEGLKRTWIG 318
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 30.7 bits (66), Expect = 0.20
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 271 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 450
PI+ VK +Q ++A + YK + +I + GLL FW G + R + +
Sbjct: 223 PIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGI 276
Query: 451 NFAFKDKYKQV 483
F +K ++
Sbjct: 277 VFTVYEKVMEI 287
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 30.3 bits (65), Expect = 0.26
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 265 VAPIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWRGNFANVIRYF 435
VAP++ VK Q Q + G + + I +G+ +RG ++ Y
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 436 PTQALNFAFKDKYKQVFLGGVDKKSSS 516
P+ ++ F +K K +F GV+KK +S
Sbjct: 83 PSWSIYFVVYEKCKVLF--GVNKKYTS 107
Score = 28.7 bits (61), Expect = 0.80
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 325 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 423
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.9 bits (64), Expect = 0.35
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 313 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 456
S I +Y G++ F + EQG++ + G A+++R P + F
Sbjct: 303 SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 0.61
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 666 SFRDRKNSRWPSPLPTSXARRVRAKSRGYTKPERWLRRHH--RRPDYQR 526
S+ KNS+W SP S ++ + S Y+K ++ H ++P + R
Sbjct: 105 SYNKGKNSKWSSPF-ASTTKKPQESSEKYSKKSSTRKKEHFNKKPSFPR 152
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.1 bits (62), Expect = 0.61
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +3
Query: 210 RSLRTSWLAVSPPPSQDRRSTHRACQAAAPSTARQQADRRRPALQGYRRCLRPYPQGAGS 389
R L S + PPP +++ A ++AP QQ P Q ++ YPQ
Sbjct: 195 RLLEDSAVKAQPPPPPPQQNYPPAASSSAPPMQYQQT--AYPPQQAPYPPVQAYPQAPQQ 252
Query: 390 PFILAW*LRQRH 425
P ++A +H
Sbjct: 253 PIVVAQPTEHKH 264
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 4.3
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Frame = +1
Query: 295 LQVQHVSK-QIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP---TQALNFAF 462
+QV K + A K + D + G + FW G F + + F AL
Sbjct: 195 MQVDRARKGEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLSQSFKLHLADALCLGV 254
Query: 463 KDKYKQVFLGGVDKKS 510
VF G+D+K+
Sbjct: 255 SANGDMVFSSGIDRKT 270
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 61 YEITPNLLFKNQELVFRDPPSACAATPTSTY 153
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 388 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKSSSGVTSLVI 537
LLS WR +FA I Q N K + K+ L + +S V S ++
Sbjct: 773 LLSSWRDDFAQYITNSIKQPPNSESKGQSKKTLLHDSNMESLKSVISRIV 822
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 365 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 258
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 243 PPPSQDRRSTHRACQAAAPSTARQQADRRRPALQGYRR 356
PP SQ ST +AA+PS +Q RP+L ++
Sbjct: 36 PPSSQQPPSTPNGKEAASPSALKQNV---RPSLNSVQQ 70
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 349 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 441
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 265 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 408
V P+E V++ LQ+Q K + Y G D +I + GL +G
Sbjct: 130 VGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGLSGIMKG 172
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,614,529
Number of Sequences: 5004
Number of extensions: 51623
Number of successful extensions: 189
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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