Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060445.seq
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.1  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   9.3  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 253 PRQDAHPHRGEPLRDRP 303
           PR   H  R EP R RP
Sbjct: 318 PRATDHQRRNEPKRPRP 334


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 247 SAPRQDAHPHRGEPLRD 297
           ++PRQ A  H G P R+
Sbjct: 917 TSPRQPAETHAGSPCRN 933


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 457 FEIGGLLSSPLGTLFIDKGQQSLLVI 380
           F++GG L+   GTL+   G  ++ VI
Sbjct: 361 FKVGGFLNIDYGTLYSLFGSTAMNVI 386


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 165 SQCYQRILS*SSPQCLFRSKLRTRRR 88
           SQ   R+L  S P C +  + ++RR+
Sbjct: 394 SQEESRVLDLSKPGCSYTGEQKSRRK 419


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 329 EKYGKSLETWIADDTSGDYK 388
           E+  + +E   +DDT  DYK
Sbjct: 20  ERIFEEIEETFSDDTKPDYK 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,256
Number of Sequences: 336
Number of extensions: 2830
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)